RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 SNX18Q96RF0 628 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 TDRD1Q9BXT4 1180 aaKnown RBP5.07□□□□□ -1.6
SKP1-202ENST00000353411 ZNF518BQ9C0D4 1074 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 CHST7Q9NS84 486 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 BLOC1S4Q9NUP1 217 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 GRHL1Q9NZI5 618 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 PCDH10Q9P2E7 1040 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 SCN8AQ9UQD0 1980 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 TOR1BO14657 336 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 AQP9O43315 295 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 PGAM1P18669 254 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 PIK3CGP48736 1102 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 EMC2Q15006 297 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 EPHA7Q15375 998 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 BTBD16Q32M84 506 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 PLEKHG4Q58EX7 1191 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 HES5Q5TA89 166 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 PID1Q7Z2X4 250 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 ZC3H7AQ8IWR0 971 aaKnown RBP5.07□□□□□ -1.6
SKP1-202ENST00000353411 GPD1LQ8N335 351 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 PARP8Q8N3A8 854 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 CDYL2Q8N8U2 506 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 CHURC1Q8WUH1 139 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 HYLS1Q96M11 299 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 HEXIM2Q96MH2 286 aaKnown RBP5.07□□□□□ -1.6
SKP1-202ENST00000353411 RETREG1Q9H6L5 497 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 BTG4Q9NY30 223 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 UBQLN1Q9UMX0 589 aaKnown RBP5.07□□□□□ -1.6
SKP1-202ENST00000353411 TLL2Q9Y6L7 1015 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 BCKDKO14874 412 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 SOX11P35716 441 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 PRELPP51888 382 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 WDR4P57081 412 aaKnown RBP5.07□□□□□ -1.6
SKP1-202ENST00000353411 NFATC3Q12968 1075 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 GALEQ14376 348 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 CYP1B1Q16678 543 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 CERKLQ49MI3 558 aaPredicted RBP5.07□□□□□ -1.6
SKP1-202ENST00000353411 C4orf46Q504U0 113 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 RALGPS1Q5JS13 557 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 SLC15A4Q8N697 577 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 BANPQ8N9N5 519 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 MCOLN3Q8TDD5 553 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 ANKRD49Q8WVL7 239 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 ZNF669Q96BR6 464 aaPredicted RBP5.07□□□□□ -1.6
SKP1-202ENST00000353411 DIRAS2Q96HU8 199 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 REEP1Q9H902 201 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 SACM1LQ9NTJ5 587 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 ERAP1Q9NZ08 941 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 PRAMEF33A0A0G2JMD5 474 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 PRSS44E7EML9 344 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 YKT6O15498 198 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 PRAMEF10O60809 474 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 SUPT7LO94864 414 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 FADS2O95864 444 aaKnown RBP5.07□□□□□ -1.6
SKP1-202ENST00000353411 CDC42P60953 191 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 SLC9A5Q14940 896 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 PRKD1Q15139 912 aaPredicted RBP5.07□□□□□ -1.6
SKP1-202ENST00000353411 NDUFAF6Q330K2 333 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 AFTPHQ6ULP2 937 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 ARHGAP36Q6ZRI8 547 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 MEIOBQ8N635 442 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 LPCAT1Q8NF37 534 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 ZNF431Q8TF32 576 aaPredicted RBP5.07□□□□□ -1.6
SKP1-202ENST00000353411 SLC44A1Q8WWI5 657 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 SLC30A2Q9BRI3 323 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 CCDC32Q9BV29 185 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 GANQ9H2C0 597 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 PDGFCQ9NRA1 345 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 CLN6Q9NWW5 311 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 ADPRHL2Q9NX46 363 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 NFKBIL1Q9UBC1 381 aaPredicted RBP5.07□□□□□ -1.6
SKP1-202ENST00000353411 NXF1Q9UBU9 619 aaKnown RBP5.07□□□□□ -1.6
SKP1-202ENST00000353411 CNTNAP5Q8WYK1 1306 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 RNF225M0QZC1 329 aaPredicted RBP5.07□□□□□ -1.6
SKP1-202ENST00000353411 GMDSO60547 372 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 LRIG2O94898 1065 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 CST1P01037 141 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 RPS7P62081 194 aaKnown RBP5.07□□□□□ -1.6
SKP1-202ENST00000353411 C1QBPQ07021 282 aaKnown RBP5.07□□□□□ -1.6
SKP1-202ENST00000353411 CLEC16AQ2KHT3 1053 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 SPRED3Q2MJR0 410 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 ZNF699Q32M78 642 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 EFHC2Q5JST6 749 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 NAPEPLDQ6IQ20 393 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 SCML4Q8N228 414 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 ACTL9Q8TC94 416 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 TFB1MQ8WVM0 346 aaKnown RBP5.07□□□□□ -1.6
SKP1-202ENST00000353411 DCSTAMPQ9H295 470 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 DNPEPQ9ULA0 475 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 PLA2G4CQ9UP65 541 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 A0A1W2PPM1 405 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 AQP12BA6NM10 295 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 LSM8O95777 96 aaKnown RBP5.07□□□□□ -1.6
SKP1-202ENST00000353411 HSD17B4P51659 736 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 MAD2L1Q13257 205 aaPredicted RBP5.07□□□□□ -1.6
SKP1-202ENST00000353411 GPR162Q16538 588 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 ZNF667Q5HYK9 610 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 COLEC12Q5KU26 742 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 MPP7Q5T2T1 576 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 LIPMQ5VYY2 423 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms