RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 MAELQ96JY0 434 aaKnown RBP22.34■■□□□ 1.17
UPF3A-201ENST00000351487 IGSF5Q9NSI5 407 aa22.34■■□□□ 1.17
UPF3A-201ENST00000351487 TMEM248Q9NWD8 314 aa22.34■■□□□ 1.17
UPF3A-201ENST00000351487 DLGAP2Q9P1A6 1054 aa22.34■■□□□ 1.17
UPF3A-201ENST00000351487 MRPL42Q9Y6G3 142 aaKnown RBP22.34■■□□□ 1.17
UPF3A-201ENST00000351487 PAPSS2O95340 614 aaPredicted RBP22.33■■□□□ 1.17
UPF3A-201ENST00000351487 ATP5F1P24539 256 aaPredicted RBP22.33■■□□□ 1.17
UPF3A-201ENST00000351487 NUDT2P50583 147 aa22.33■■□□□ 1.17
UPF3A-201ENST00000351487 SLC12A2P55011 1212 aa22.33■■□□□ 1.17
UPF3A-201ENST00000351487 DSC1Q08554 894 aa22.33■■□□□ 1.17
UPF3A-201ENST00000351487 KCNA10Q16322 511 aa22.33■■□□□ 1.17
UPF3A-201ENST00000351487 KBTBD6Q86V97 674 aa22.33■■□□□ 1.17
UPF3A-201ENST00000351487 DCP1BQ8IZD4 617 aaKnown RBP22.33■■□□□ 1.17
UPF3A-201ENST00000351487 NUP93Q8N1F7 819 aa22.33■■□□□ 1.17
UPF3A-201ENST00000351487 KLHDC9Q8NEP7 349 aa22.33■■□□□ 1.17
UPF3A-201ENST00000351487 GABPB2Q8TAK5 448 aaPredicted RBP22.33■■□□□ 1.17
UPF3A-201ENST00000351487 C8orf48Q96LL4 319 aa22.33■■□□□ 1.17
UPF3A-201ENST00000351487 FBXO44Q9H4M3 255 aa22.33■■□□□ 1.17
UPF3A-201ENST00000351487 STK39Q9UEW8 545 aa22.33■■□□□ 1.17
UPF3A-201ENST00000351487 VPS28Q9UK41 221 aa22.33■■□□□ 1.17
UPF3A-201ENST00000351487 AURKAO14965 403 aa22.33■■□□□ 1.16
UPF3A-201ENST00000351487 JUNP05412 331 aaKnown RBP22.33■■□□□ 1.16
UPF3A-201ENST00000351487 CD1EP15812 388 aa22.33■■□□□ 1.16
UPF3A-201ENST00000351487 LEPRP48357 1165 aaKnown RBP22.33■■□□□ 1.16
UPF3A-201ENST00000351487 SERPINH1P50454 418 aaKnown RBP22.33■■□□□ 1.16
UPF3A-201ENST00000351487 CLCN5P51795 746 aa22.33■■□□□ 1.16
UPF3A-201ENST00000351487 TNK2Q07912 1038 aa22.33■■□□□ 1.16
UPF3A-201ENST00000351487 MSLNQ13421 630 aaPredicted RBP22.33■■□□□ 1.16
UPF3A-201ENST00000351487 PCSK7Q16549 785 aa22.33■■□□□ 1.16
UPF3A-201ENST00000351487 TECRLQ5HYJ1 363 aa22.33■■□□□ 1.16
UPF3A-201ENST00000351487 PPM1LQ5SGD2 360 aa22.33■■□□□ 1.16
UPF3A-201ENST00000351487 CCSAPQ6IQ19 270 aaPredicted RBP22.33■■□□□ 1.16
UPF3A-201ENST00000351487 CNSTQ6PJW8 725 aa22.33■■□□□ 1.16
UPF3A-201ENST00000351487 ARHGAP18Q8N392 663 aa22.33■■□□□ 1.16
UPF3A-201ENST00000351487 SPATA6LQ8N4H0 392 aa22.33■■□□□ 1.16
UPF3A-201ENST00000351487 KYQ8NBH2 561 aa22.33■■□□□ 1.16
UPF3A-201ENST00000351487 PPP1R36Q96LQ0 422 aa22.33■■□□□ 1.16
UPF3A-201ENST00000351487 VCX3BQ9H321 246 aa22.33■■□□□ 1.16
UPF3A-201ENST00000351487 TBX4P57082 545 aa22.32■■□□□ 1.16
UPF3A-201ENST00000351487 XIAPP98170 497 aa22.32■■□□□ 1.16
UPF3A-201ENST00000351487 CYLC2Q14093 348 aaPredicted RBP22.32■■□□□ 1.16
UPF3A-201ENST00000351487 SLC14A2Q15849 920 aa22.32■■□□□ 1.16
UPF3A-201ENST00000351487 NFE2Q16621 373 aaPredicted RBP22.32■■□□□ 1.16
UPF3A-201ENST00000351487 RBM20Q5T481 1227 aaKnown RBP22.32■■□□□ 1.16
UPF3A-201ENST00000351487 OR52E8Q6IFG1 317 aa22.32■■□□□ 1.16
UPF3A-201ENST00000351487 RGMBQ6NW40 437 aa22.32■■□□□ 1.16
UPF3A-201ENST00000351487 KDELC2Q7Z4H8 507 aa22.32■■□□□ 1.16
UPF3A-201ENST00000351487 HMCESQ96FZ2 354 aa22.32■■□□□ 1.16
UPF3A-201ENST00000351487 SERPINI1Q99574 410 aa22.32■■□□□ 1.16
UPF3A-201ENST00000351487 ZYG11BQ9C0D3 744 aa22.32■■□□□ 1.16
UPF3A-201ENST00000351487 ZBTB26Q9HCK0 441 aa22.32■■□□□ 1.16
UPF3A-201ENST00000351487 IGLV3-10A0A075B6K4 115 aa22.31■■□□□ 1.16
UPF3A-201ENST00000351487 AIM2O14862 343 aa22.31■■□□□ 1.16
UPF3A-201ENST00000351487 TADA2AO75478 443 aa22.31■■□□□ 1.16
UPF3A-201ENST00000351487 MS4A13Q5J8X5 152 aa22.31■■□□□ 1.16
UPF3A-201ENST00000351487 NOMO2Q5JPE7 1267 aa22.31■■□□□ 1.16
UPF3A-201ENST00000351487 CCNYL1Q8N7R7 359 aa22.31■■□□□ 1.16
UPF3A-201ENST00000351487 CCDC126Q96EE4 140 aa22.31■■□□□ 1.16
UPF3A-201ENST00000351487 POMKQ9H5K3 350 aa22.31■■□□□ 1.16
UPF3A-201ENST00000351487 NT5MQ9NPB1 228 aa22.31■■□□□ 1.16
UPF3A-201ENST00000351487 ADAMTS6Q9UKP5 1117 aa22.31■■□□□ 1.16
UPF3A-201ENST00000351487 GABRQQ9UN88 632 aa22.31■■□□□ 1.16
UPF3A-201ENST00000351487 TRPC5OSA6NMA1 111 aa22.31■■□□□ 1.16
UPF3A-201ENST00000351487 H3BNX3 289 aa22.31■■□□□ 1.16
UPF3A-201ENST00000351487 CASQ2O14958 399 aaPredicted RBP22.31■■□□□ 1.16
UPF3A-201ENST00000351487 SLC10A3P09131 477 aa22.31■■□□□ 1.16
UPF3A-201ENST00000351487 CST5P28325 142 aaPredicted RBP22.31■■□□□ 1.16
UPF3A-201ENST00000351487 SATB1Q01826 763 aa22.31■■□□□ 1.16
UPF3A-201ENST00000351487 FAM83EQ2M2I3 478 aa22.31■■□□□ 1.16
UPF3A-201ENST00000351487 GLB1LQ6UWU2 654 aa22.31■■□□□ 1.16
UPF3A-201ENST00000351487 TRIM67Q6ZTA4 783 aa22.31■■□□□ 1.16
UPF3A-201ENST00000351487 ZNF280BQ86YH2 543 aa22.31■■□□□ 1.16
UPF3A-201ENST00000351487 PDSS2Q86YH6 399 aa22.31■■□□□ 1.16
UPF3A-201ENST00000351487 DSELQ8IZU8 1212 aa22.31■■□□□ 1.16
UPF3A-201ENST00000351487 TEX26Q8N6G2 289 aa22.31■■□□□ 1.16
UPF3A-201ENST00000351487 OR13J1Q8NGT2 312 aa22.31■■□□□ 1.16
UPF3A-201ENST00000351487 PPP2R3CQ969Q6 453 aa22.31■■□□□ 1.16
UPF3A-201ENST00000351487 IFT43Q96FT9 208 aa22.31■■□□□ 1.16
UPF3A-201ENST00000351487 OLFM1Q99784 485 aa22.31■■□□□ 1.16
UPF3A-201ENST00000351487 RGS18Q9NS28 235 aa22.31■■□□□ 1.16
UPF3A-201ENST00000351487 MMP2P08253 660 aa22.3■■□□□ 1.16
UPF3A-201ENST00000351487 FCGRTP55899 365 aa22.3■■□□□ 1.16
UPF3A-201ENST00000351487 PFKPQ01813 784 aa22.3■■□□□ 1.16
UPF3A-201ENST00000351487 TRIM32Q13049 653 aa22.3■■□□□ 1.16
UPF3A-201ENST00000351487 PDCD2Q16342 344 aaPredicted RBP22.3■■□□□ 1.16
UPF3A-201ENST00000351487 MARC1Q5VT66 337 aa22.3■■□□□ 1.16
UPF3A-201ENST00000351487 TMEM198Q66K66 360 aa22.3■■□□□ 1.16
UPF3A-201ENST00000351487 TFAP2DQ7Z6R9 452 aa22.3■■□□□ 1.16
UPF3A-201ENST00000351487 EFCAB3Q8N7B9 438 aa22.3■■□□□ 1.16
UPF3A-201ENST00000351487 CATSPER2Q96P56 530 aa22.3■■□□□ 1.16
UPF3A-201ENST00000351487 IL37Q9NZH6 218 aa22.3■■□□□ 1.16
UPF3A-201ENST00000351487 VWA8A3KMH1 1905 aa22.3■■□□□ 1.16
UPF3A-201ENST00000351487 J3KR12 359 aa22.3■■□□□ 1.16
UPF3A-201ENST00000351487 EOMESO95936 686 aa22.3■■□□□ 1.16
UPF3A-201ENST00000351487 HAPLN1P10915 354 aaPredicted RBP22.3■■□□□ 1.16
UPF3A-201ENST00000351487 CD86P42081 329 aa22.3■■□□□ 1.16
UPF3A-201ENST00000351487 SLC10A7Q0GE19 358 aa22.3■■□□□ 1.16
UPF3A-201ENST00000351487 CSHL1Q14406 222 aa22.3■■□□□ 1.16
UPF3A-201ENST00000351487 ZNF789Q5FWF6 425 aa22.3■■□□□ 1.16
UPF3A-201ENST00000351487 AGAP9Q5VTM2 703 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms