RNA–Protein interactions for RNA: ENST00000349780.8

CDK5RAP2-201, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDK5RAP2, Length 6,228 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-201ENST00000349780 STXBP2Q15833 593 aa11.87□□□□□ -0.51
CDK5RAP2-201ENST00000349780 TMEM119Q4V9L6 283 aa11.87□□□□□ -0.51
CDK5RAP2-201ENST00000349780 PKN3Q6P5Z2 889 aa11.87□□□□□ -0.51
CDK5RAP2-201ENST00000349780 AHSA2Q719I0 299 aa11.87□□□□□ -0.51
CDK5RAP2-201ENST00000349780 BRSK2Q8IWQ3 736 aa11.87□□□□□ -0.51
CDK5RAP2-201ENST00000349780 SMG8Q8ND04 991 aaKnown RBP11.87□□□□□ -0.51
CDK5RAP2-201ENST00000349780 ZNF431Q8TF32 576 aaPredicted RBP11.87□□□□□ -0.51
CDK5RAP2-201ENST00000349780 RACGAP1Q9H0H5 632 aa11.87□□□□□ -0.51
CDK5RAP2-201ENST00000349780 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.87□□□□□ -0.516e-7■■■□□ 18.1
CDK5RAP2-201ENST00000349780 GABBR1Q9UBS5 961 aa11.87□□□□□ -0.51
CDK5RAP2-201ENST00000349780 ABCA9Q8IUA7 1624 aa11.87□□□□□ -0.51
CDK5RAP2-201ENST00000349780 H0YJX3 145 aa11.87□□□□□ -0.51
CDK5RAP2-201ENST00000349780 APOC4-APOC2K7ER74 178 aa11.87□□□□□ -0.51
CDK5RAP2-201ENST00000349780 APOC2P02655 101 aa11.87□□□□□ -0.51
CDK5RAP2-201ENST00000349780 LRP8Q14114 963 aa11.87□□□□□ -0.51
CDK5RAP2-201ENST00000349780 SPON1Q9HCB6 807 aa11.87□□□□□ -0.51
CDK5RAP2-201ENST00000349780 COMMD9Q9P000 198 aa11.87□□□□□ -0.51
CDK5RAP2-201ENST00000349780 H3BNH8 94 aa11.87□□□□□ -0.51
CDK5RAP2-201ENST00000349780 EI24O14681 340 aa11.87□□□□□ -0.51
CDK5RAP2-201ENST00000349780 PPEF1O14829 653 aaPredicted RBP11.87□□□□□ -0.51
CDK5RAP2-201ENST00000349780 NUAK1O60285 661 aa11.87□□□□□ -0.51
CDK5RAP2-201ENST00000349780 TCF4P15884 667 aa11.87□□□□□ -0.51
CDK5RAP2-201ENST00000349780 SDC2P34741 201 aa11.87□□□□□ -0.51
CDK5RAP2-201ENST00000349780 MAB21L1Q13394 359 aa11.87□□□□□ -0.51
CDK5RAP2-201ENST00000349780 SMCO1Q147U7 214 aa11.87□□□□□ -0.51
CDK5RAP2-201ENST00000349780 AFTPHQ6ULP2 937 aa11.87□□□□□ -0.51
CDK5RAP2-201ENST00000349780 C12orf50Q8NA57 414 aaPredicted RBP11.87□□□□□ -0.51
CDK5RAP2-201ENST00000349780 MIPEPQ99797 713 aa11.87□□□□□ -0.51
CDK5RAP2-201ENST00000349780 MRPL4Q9BYD3 311 aaKnown RBP11.87□□□□□ -0.51
CDK5RAP2-201ENST00000349780 TMEM138Q9NPI0 162 aa11.87□□□□□ -0.51
CDK5RAP2-201ENST00000349780 ITM2CQ9NQX7 267 aa11.87□□□□□ -0.51
CDK5RAP2-201ENST00000349780 ADAM28Q9UKQ2 775 aa11.87□□□□□ -0.51
CDK5RAP2-201ENST00000349780 SCAF8Q9UPN6 1271 aaKnown RBP11.87□□□□□ -0.51
CDK5RAP2-201ENST00000349780 CEP152O94986 1710 aa11.87□□□□□ -0.51
CDK5RAP2-201ENST00000349780 FAM86B1E9PN63 330 aa11.87□□□□□ -0.51
CDK5RAP2-201ENST00000349780 NOL4O94818 638 aa11.87□□□□□ -0.51
CDK5RAP2-201ENST00000349780 SEC23AQ15436 765 aa11.87□□□□□ -0.51
CDK5RAP2-201ENST00000349780 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.87□□□□□ -0.51
CDK5RAP2-201ENST00000349780 CHMP1BQ7LBR1 199 aa11.87□□□□□ -0.51
CDK5RAP2-201ENST00000349780 DEPDC4Q8N2C3 294 aa11.87□□□□□ -0.51
CDK5RAP2-201ENST00000349780 EPS8L1Q8TE68 723 aa11.87□□□□□ -0.51
CDK5RAP2-201ENST00000349780 MED30Q96HR3 178 aa11.87□□□□□ -0.51
CDK5RAP2-201ENST00000349780 CDK5RAP1Q96SZ6 601 aaKnown RBP11.87□□□□□ -0.51
CDK5RAP2-201ENST00000349780 NIF3L1Q9GZT8 377 aa11.87□□□□□ -0.51
CDK5RAP2-201ENST00000349780 TOPORSQ9NS56 1045 aaPredicted RBP11.87□□□□□ -0.51
CDK5RAP2-201ENST00000349780 COG5Q9UP83 839 aa11.87□□□□□ -0.51
CDK5RAP2-201ENST00000349780 RNF17Q9BXT8 1623 aaKnown RBP11.86□□□□□ -0.51
CDK5RAP2-201ENST00000349780 METP08581 1390 aa11.86□□□□□ -0.51
CDK5RAP2-201ENST00000349780 BBIP1A8MTZ0 92 aa11.86□□□□□ -0.51
CDK5RAP2-201ENST00000349780 CHURC1-FNTBB4DL54 471 aa11.86□□□□□ -0.51
CDK5RAP2-201ENST00000349780 CD36P16671 472 aa11.86□□□□□ -0.51
CDK5RAP2-201ENST00000349780 GMFBP60983 142 aa11.86□□□□□ -0.51
CDK5RAP2-201ENST00000349780 SIM2Q14190 667 aaPredicted RBP11.86□□□□□ -0.51
CDK5RAP2-201ENST00000349780 PHKG1Q16816 387 aa11.86□□□□□ -0.51
CDK5RAP2-201ENST00000349780 RAP1GAP2Q684P5 730 aa11.86□□□□□ -0.51
CDK5RAP2-201ENST00000349780 CATSPER4Q7RTX7 472 aa11.86□□□□□ -0.51
CDK5RAP2-201ENST00000349780 ADGRG6Q86SQ4 1221 aa11.86□□□□□ -0.51
CDK5RAP2-201ENST00000349780 SPAG16Q8N0X2 631 aa11.86□□□□□ -0.51
CDK5RAP2-201ENST00000349780 PMEPA1Q969W9 287 aa11.86□□□□□ -0.51
CDK5RAP2-201ENST00000349780 ELMO3Q96BJ8 720 aa11.86□□□□□ -0.51
CDK5RAP2-201ENST00000349780 IFT52Q9Y366 437 aa11.86□□□□□ -0.51
CDK5RAP2-201ENST00000349780 FAM220BPB1ANY3 271 aa11.86□□□□□ -0.51
CDK5RAP2-201ENST00000349780 PLK4O00444 970 aa11.86□□□□□ -0.51
CDK5RAP2-201ENST00000349780 PAPSS1O43252 624 aaPredicted RBP11.86□□□□□ -0.51
CDK5RAP2-201ENST00000349780 AP2A2O94973 939 aa11.86□□□□□ -0.51
CDK5RAP2-201ENST00000349780 ZNF181Q2M3W8 571 aa11.86□□□□□ -0.51
CDK5RAP2-201ENST00000349780 TMEM236Q5W0B7 351 aa11.86□□□□□ -0.51
CDK5RAP2-201ENST00000349780 CDC73Q6P1J9 531 aa11.86□□□□□ -0.51
CDK5RAP2-201ENST00000349780 TMEM126BQ8IUX1 230 aa11.86□□□□□ -0.51
CDK5RAP2-201ENST00000349780 PACRGLQ8N7B6 248 aa11.86□□□□□ -0.51
CDK5RAP2-201ENST00000349780 SEC14L1Q92503 715 aa11.86□□□□□ -0.51
CDK5RAP2-201ENST00000349780 VAT1Q99536 393 aa11.86□□□□□ -0.51
CDK5RAP2-201ENST00000349780 PCDHAC1Q9H158 963 aa11.86□□□□□ -0.51
CDK5RAP2-201ENST00000349780 DCSTAMPQ9H295 470 aa11.86□□□□□ -0.51
CDK5RAP2-201ENST00000349780 RGS18Q9NS28 235 aa11.86□□□□□ -0.51
CDK5RAP2-201ENST00000349780 B8ZZF3 427 aa11.86□□□□□ -0.51
CDK5RAP2-201ENST00000349780 H3BN98 237 aa11.86□□□□□ -0.51
CDK5RAP2-201ENST00000349780 ICMTO60725 284 aa11.86□□□□□ -0.51
CDK5RAP2-201ENST00000349780 ATP13A4Q4VNC1 1196 aa11.86□□□□□ -0.51
CDK5RAP2-201ENST00000349780 SLC30A10Q6XR72 485 aa11.86□□□□□ -0.51
CDK5RAP2-201ENST00000349780 KCTD17Q8N5Z5 321 aa11.86□□□□□ -0.51
CDK5RAP2-201ENST00000349780 OCEL1Q9H607 264 aa11.86□□□□□ -0.51
CDK5RAP2-201ENST00000349780 H3BM21 787 aa11.86□□□□□ -0.51
CDK5RAP2-201ENST00000349780 MYCP01106 439 aaPredicted RBP11.86□□□□□ -0.51
CDK5RAP2-201ENST00000349780 GPIP06744 558 aa11.86□□□□□ -0.51
CDK5RAP2-201ENST00000349780 GJA9P57773 515 aa11.86□□□□□ -0.51
CDK5RAP2-201ENST00000349780 SKIV2LQ15477 1246 aaKnown RBP11.86□□□□□ -0.51
CDK5RAP2-201ENST00000349780 UGT3A1Q6NUS8 523 aa11.86□□□□□ -0.51
CDK5RAP2-201ENST00000349780 MEIOBQ8N635 442 aa11.86□□□□□ -0.51
CDK5RAP2-201ENST00000349780 GPRASP2Q96D09 838 aa11.86□□□□□ -0.51
CDK5RAP2-201ENST00000349780 CCDC120Q96HB5 630 aa11.86□□□□□ -0.51
CDK5RAP2-201ENST00000349780 ZNF518BQ9C0D4 1074 aa11.86□□□□□ -0.51
CDK5RAP2-201ENST00000349780 CMTM6Q9NX76 183 aa11.86□□□□□ -0.51
CDK5RAP2-201ENST00000349780 DDX43Q9NXZ2 648 aaKnown RBP11.86□□□□□ -0.51
CDK5RAP2-201ENST00000349780 MAGEL2Q9UJ55 1249 aa11.86□□□□□ -0.51
CDK5RAP2-201ENST00000349780 U3KQV3 271 aa11.86□□□□□ -0.51
CDK5RAP2-201ENST00000349780 SLC18A1P54219 525 aa11.85□□□□□ -0.51
CDK5RAP2-201ENST00000349780 CRADDP78560 199 aa11.85□□□□□ -0.51
CDK5RAP2-201ENST00000349780 BRINP3Q76B58 766 aa11.85□□□□□ -0.51
CDK5RAP2-201ENST00000349780 ZNF720Q7Z2F6 126 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms