RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 C1orf232A0A0U1RR37 186 aa14.87□□□□□ -0.03
NUP50-201ENST00000347635 OCM2P0CE71 109 aa14.87□□□□□ -0.03
NUP50-201ENST00000347635 OCMP0CE72 109 aaPredicted RBP14.87□□□□□ -0.03
NUP50-201ENST00000347635 SMPD1P17405 629 aa14.87□□□□□ -0.03
NUP50-201ENST00000347635 SEMA5AQ13591 1074 aa14.87□□□□□ -0.03
NUP50-201ENST00000347635 POLD3Q15054 466 aaPredicted RBP14.87□□□□□ -0.03
NUP50-201ENST00000347635 WSCD1Q658N2 575 aa14.87□□□□□ -0.03
NUP50-201ENST00000347635 KIAA2013Q8IYS2 634 aa14.87□□□□□ -0.03
NUP50-201ENST00000347635 SNX31Q8N9S9 440 aa14.87□□□□□ -0.03
NUP50-201ENST00000347635 PTCD3Q96EY7 689 aaKnown RBP14.87□□□□□ -0.03
NUP50-201ENST00000347635 PLGRKTQ9HBL7 147 aa14.87□□□□□ -0.03
NUP50-201ENST00000347635 TIMMDC1Q9NPL8 285 aa14.87□□□□□ -0.03
NUP50-201ENST00000347635 PTCH2Q9Y6C5 1203 aa14.87□□□□□ -0.03
NUP50-201ENST00000347635 LRP5O75197 1615 aa14.87□□□□□ -0.03
NUP50-201ENST00000347635 FGF10O15520 208 aaPredicted RBP14.87□□□□□ -0.03
NUP50-201ENST00000347635 METTL18O95568 372 aa14.87□□□□□ -0.03
NUP50-201ENST00000347635 LBPP18428 481 aa14.87□□□□□ -0.03
NUP50-201ENST00000347635 MBTD1Q05BQ5 628 aa14.87□□□□□ -0.03
NUP50-201ENST00000347635 DMC1Q14565 340 aa14.87□□□□□ -0.03
NUP50-201ENST00000347635 TFAP2DQ7Z6R9 452 aa14.87□□□□□ -0.03
NUP50-201ENST00000347635 MIB1Q86YT6 1006 aa14.87□□□□□ -0.03
NUP50-201ENST00000347635 P3H2Q8IVL5 708 aa14.87□□□□□ -0.03
NUP50-201ENST00000347635 MICU2Q8IYU8 434 aa14.87□□□□□ -0.03
NUP50-201ENST00000347635 FNDC5Q8NAU1 212 aa14.87□□□□□ -0.03
NUP50-201ENST00000347635 VPS33AQ96AX1 596 aa14.87□□□□□ -0.03
NUP50-201ENST00000347635 DEFB118Q96PH6 123 aa14.87□□□□□ -0.03
NUP50-201ENST00000347635 EIF2B3Q9NR50 452 aaKnown RBP14.87□□□□□ -0.03
NUP50-201ENST00000347635 TMCO1Q9UM00 188 aa14.87□□□□□ -0.03
NUP50-201ENST00000347635 FAM159BA6NKW6 160 aa14.87□□□□□ -0.03
NUP50-201ENST00000347635 ITM2AO43736 263 aa14.87□□□□□ -0.03
NUP50-201ENST00000347635 FSTL1Q12841 308 aa14.87□□□□□ -0.03
NUP50-201ENST00000347635 GTF2H3Q13889 308 aa14.87□□□□□ -0.03
NUP50-201ENST00000347635 ANKS6Q68DC2 871 aa14.87□□□□□ -0.03
NUP50-201ENST00000347635 SLC26A9Q7LBE3 791 aa14.87□□□□□ -0.03
NUP50-201ENST00000347635 RAB42Q8N4Z0 105 aa14.87□□□□□ -0.03
NUP50-201ENST00000347635 TEPSINQ96N21 525 aa14.87□□□□□ -0.03
NUP50-201ENST00000347635 PDZD7Q9H5P4 517 aa14.87□□□□□ -0.03
NUP50-201ENST00000347635 CRYL1Q9Y2S2 319 aa14.87□□□□□ -0.03
NUP50-201ENST00000347635 EDIL3O43854 480 aa14.86□□□□□ -0.03
NUP50-201ENST00000347635 GNAZP19086 355 aa14.86□□□□□ -0.03
NUP50-201ENST00000347635 GPD2P43304 727 aa14.86□□□□□ -0.03
NUP50-201ENST00000347635 EFEMP1Q12805 493 aa14.86□□□□□ -0.03
NUP50-201ENST00000347635 BNIP2Q12982 314 aa14.86□□□□□ -0.03
NUP50-201ENST00000347635 LSM12Q3MHD2 195 aaKnown RBP14.86□□□□□ -0.03
NUP50-201ENST00000347635 FSTL4Q6MZW2 842 aa14.86□□□□□ -0.03
NUP50-201ENST00000347635 FIG4Q92562 907 aa14.86□□□□□ -0.03
NUP50-201ENST00000347635 SH3GL1Q99961 368 aa14.86□□□□□ -0.03
NUP50-201ENST00000347635 DUSP16Q9BY84 665 aa14.86□□□□□ -0.03
NUP50-201ENST00000347635 ACSS2Q9NR19 701 aa14.86□□□□□ -0.03
NUP50-201ENST00000347635 PCDHGB4Q9UN71 923 aa14.86□□□□□ -0.03
NUP50-201ENST00000347635 ANKRD36CQ5JPF3 1778 aa14.86□□□□□ -0.03
NUP50-201ENST00000347635 TMEM247A6NEH6 219 aa14.86□□□□□ -0.03
NUP50-201ENST00000347635 GPR25O00155 361 aa14.86□□□□□ -0.03
NUP50-201ENST00000347635 COL6A2P12110 1019 aa14.86□□□□□ -0.03
NUP50-201ENST00000347635 HOXB8P17481 243 aaPredicted RBP14.86□□□□□ -0.03
NUP50-201ENST00000347635 DAB2P98082 770 aa14.86□□□□□ -0.03
NUP50-201ENST00000347635 TLDC1Q6P9B6 456 aa14.86□□□□□ -0.03
NUP50-201ENST00000347635 ABRAXAS1Q6UWZ7 409 aa14.86□□□□□ -0.03
NUP50-201ENST00000347635 SLC7A6OSQ96CW6 309 aaPredicted RBP14.86□□□□□ -0.03
NUP50-201ENST00000347635 AP2A1O95782 977 aa14.86□□□□□ -0.03
NUP50-201ENST00000347635 LINGO3P0C6S8 592 aa14.86□□□□□ -0.03
NUP50-201ENST00000347635 CD52P31358 61 aa14.86□□□□□ -0.03
NUP50-201ENST00000347635 EML3Q32P44 896 aa14.86□□□□□ -0.03
NUP50-201ENST00000347635 MAGEE2Q8TD90 523 aaPredicted RBP14.86□□□□□ -0.03
NUP50-201ENST00000347635 RSPH1Q8WYR4 309 aa14.86□□□□□ -0.03
NUP50-201ENST00000347635 ARHGEF4Q9NR80 690 aa14.86□□□□□ -0.03
NUP50-201ENST00000347635 HMGXB4Q9UGU5 601 aa14.86□□□□□ -0.03
NUP50-201ENST00000347635 CACNA1SQ13698 1873 aa14.86□□□□□ -0.03
NUP50-201ENST00000347635 CFAP99D6REC4 459 aa14.86□□□□□ -0.03
NUP50-201ENST00000347635 NELFEP18615 380 aaKnown RBP14.86□□□□□ -0.03
NUP50-201ENST00000347635 TKTP29401 623 aaKnown RBP14.86□□□□□ -0.03
NUP50-201ENST00000347635 AKT1P31749 480 aa14.86□□□□□ -0.03
NUP50-201ENST00000347635 MAP3K10Q02779 954 aa14.86□□□□□ -0.03
NUP50-201ENST00000347635 NR6A1Q15406 480 aa14.86□□□□□ -0.03
NUP50-201ENST00000347635 KCNA10Q16322 511 aa14.86□□□□□ -0.03
NUP50-201ENST00000347635 ZNF567Q8N184 647 aa14.86□□□□□ -0.03
NUP50-201ENST00000347635 CNTD1Q8N815 330 aa14.86□□□□□ -0.03
NUP50-201ENST00000347635 RMND5AQ9H871 391 aa14.86□□□□□ -0.03
NUP50-201ENST00000347635 MRPL17Q9NRX2 175 aaKnown RBP14.86□□□□□ -0.03
NUP50-201ENST00000347635 DDX28Q9NUL7 540 aaKnown RBP14.86□□□□□ -0.03
NUP50-201ENST00000347635 TAS2R13Q9NYV9 303 aa14.86□□□□□ -0.03
NUP50-201ENST00000347635 MRPL42Q9Y6G3 142 aaKnown RBP14.86□□□□□ -0.03
NUP50-201ENST00000347635 ASGR1P07306 291 aa14.85□□□□□ -0.03
NUP50-201ENST00000347635 ELNP15502 786 aa14.85□□□□□ -0.03
NUP50-201ENST00000347635 TFEBP19484 476 aa14.85□□□□□ -0.03
NUP50-201ENST00000347635 AOC1P19801 751 aa14.85□□□□□ -0.03
NUP50-201ENST00000347635 CYP3A5P20815 502 aa14.85□□□□□ -0.03
NUP50-201ENST00000347635 ARL13AQ5H913 290 aaPredicted RBP14.85□□□□□ -0.03
NUP50-201ENST00000347635 C9orf57Q5W0N0 161 aa14.85□□□□□ -0.03
NUP50-201ENST00000347635 STK32CQ86UX6 486 aa14.85□□□□□ -0.03
NUP50-201ENST00000347635 PYROXD2Q8N2H3 581 aa14.85□□□□□ -0.03
NUP50-201ENST00000347635 OR56A4Q8NGH8 313 aa14.85□□□□□ -0.03
NUP50-201ENST00000347635 ZNF395Q9H8N7 513 aaPredicted RBP14.85□□□□□ -0.03
NUP50-201ENST00000347635 ABCC13Q9NSE7 274 aa14.85□□□□□ -0.03
NUP50-201ENST00000347635 TUBGCP4Q9UGJ1 667 aa14.85□□□□□ -0.03
NUP50-201ENST00000347635 DAPK2Q9UIK4 370 aa14.85□□□□□ -0.03
NUP50-201ENST00000347635 TBX4P57082 545 aa14.85□□□□□ -0.03
NUP50-201ENST00000347635 MTX3Q5HYI7 312 aa14.85□□□□□ -0.03
NUP50-201ENST00000347635 FAM45BPQ6NSW5 357 aa14.85□□□□□ -0.03
NUP50-201ENST00000347635 IGDCC3Q8IVU1 814 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms