RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 SLC25A41Q8N5S1 370 aa11.09□□□□□ -0.63
ECM1-201ENST00000346569 FAM76AQ8TAV0 307 aa11.09□□□□□ -0.63
ECM1-201ENST00000346569 MZB1Q8WU39 189 aa11.09□□□□□ -0.63
ECM1-201ENST00000346569 VOPP1Q96AW1 172 aa11.09□□□□□ -0.63
ECM1-201ENST00000346569 ISG20Q96AZ6 181 aaKnown RBP11.09□□□□□ -0.63
ECM1-201ENST00000346569 MFSD3Q96ES6 412 aa11.09□□□□□ -0.63
ECM1-201ENST00000346569 MYADMQ96S97 322 aa11.09□□□□□ -0.63
ECM1-201ENST00000346569 FSD1LQ9BXM9 530 aa11.09□□□□□ -0.63
ECM1-201ENST00000346569 STMN4Q9H169 189 aaPredicted RBP11.09□□□□□ -0.63
ECM1-201ENST00000346569 SCUBE2Q9NQ36 999 aa11.09□□□□□ -0.63
ECM1-201ENST00000346569 SAMD15Q9P1V8 674 aa11.09□□□□□ -0.63
ECM1-201ENST00000346569 PSMC3IPQ9P2W1 217 aaPredicted RBP11.09□□□□□ -0.63
ECM1-201ENST00000346569 TBK1Q9UHD2 729 aa11.09□□□□□ -0.63
ECM1-201ENST00000346569 ZNF180Q9UJW8 692 aa11.09□□□□□ -0.63
ECM1-201ENST00000346569 GGA2Q9UJY4 613 aa11.09□□□□□ -0.63
ECM1-201ENST00000346569 HS3ST2Q9Y278 367 aa11.09□□□□□ -0.63
ECM1-201ENST00000346569 TCAF1Q9Y4C2 921 aa11.09□□□□□ -0.63
ECM1-201ENST00000346569 ACTL7BQ9Y614 415 aa11.09□□□□□ -0.63
ECM1-201ENST00000346569 FOXO6A8MYZ6 492 aa11.09□□□□□ -0.63
ECM1-201ENST00000346569 TRIM24O15164 1050 aa11.09□□□□□ -0.63
ECM1-201ENST00000346569 FZD6O60353 706 aa11.09□□□□□ -0.63
ECM1-201ENST00000346569 TBX10O75333 385 aa11.09□□□□□ -0.63
ECM1-201ENST00000346569 PAPSS2O95340 614 aaPredicted RBP11.09□□□□□ -0.63
ECM1-201ENST00000346569 NDST3O95803 873 aa11.09□□□□□ -0.63
ECM1-201ENST00000346569 SRCP12931 536 aa11.09□□□□□ -0.63
ECM1-201ENST00000346569 ALADP13716 330 aa11.09□□□□□ -0.63
ECM1-201ENST00000346569 CREB1P16220 341 aa11.09□□□□□ -0.63
ECM1-201ENST00000346569 NR1D1P20393 614 aa11.09□□□□□ -0.63
ECM1-201ENST00000346569 CTSOP43234 321 aaPredicted RBP11.09□□□□□ -0.63
ECM1-201ENST00000346569 SULT2A1Q06520 285 aa11.09□□□□□ -0.63
ECM1-201ENST00000346569 MGAT5Q09328 741 aa11.09□□□□□ -0.63
ECM1-201ENST00000346569 FCHO2Q0JRZ9 810 aa11.09□□□□□ -0.63
ECM1-201ENST00000346569 NR1H3Q13133 447 aa11.09□□□□□ -0.63
ECM1-201ENST00000346569 POU6F1Q14863 301 aa11.09□□□□□ -0.63
ECM1-201ENST00000346569 GRIN2CQ14957 1233 aa11.09□□□□□ -0.63
ECM1-201ENST00000346569 SKIDA1Q1XH10 827 aa11.09□□□□□ -0.63
ECM1-201ENST00000346569 DGKKQ5KSL6 1271 aa11.09□□□□□ -0.63
ECM1-201ENST00000346569 TRIM68Q6AZZ1 485 aa11.09□□□□□ -0.63
ECM1-201ENST00000346569 KDM7AQ6ZMT4 941 aa11.09□□□□□ -0.63
ECM1-201ENST00000346569 GET4Q7L5D6 327 aaPredicted RBP11.09□□□□□ -0.63
ECM1-201ENST00000346569 TRABD2AQ86V40 505 aa11.09□□□□□ -0.63
ECM1-201ENST00000346569 ETFBKMTQ8IXQ9 262 aa11.09□□□□□ -0.63
ECM1-201ENST00000346569 PPM1NQ8N819 430 aa11.09□□□□□ -0.63
ECM1-201ENST00000346569 NAT16Q8N8M0 369 aa11.09□□□□□ -0.63
ECM1-201ENST00000346569 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.09□□□□□ -0.63
ECM1-201ENST00000346569 E2F7Q96AV8 911 aa11.09□□□□□ -0.63
ECM1-201ENST00000346569 EXOC2Q96KP1 924 aa11.09□□□□□ -0.63
ECM1-201ENST00000346569 PLA2G2FQ9BZM2 168 aa11.09□□□□□ -0.63
ECM1-201ENST00000346569 ZFP14Q9HCL3 533 aa11.09□□□□□ -0.63
ECM1-201ENST00000346569 TREX1Q9NSU2 369 aa11.09□□□□□ -0.63
ECM1-201ENST00000346569 SLC27A6Q9Y2P4 619 aa11.09□□□□□ -0.63
ECM1-201ENST00000346569 FCF1Q9Y324 198 aaKnown RBP11.09□□□□□ -0.63
ECM1-201ENST00000346569 PCDHGC4Q9Y5F7 938 aa11.09□□□□□ -0.63
ECM1-201ENST00000346569 NUP210Q8TEM1 1887 aaPredicted RBP11.09□□□□□ -0.63
ECM1-201ENST00000346569 PRRC2BQ5JSZ5 2229 aaKnown RBP11.08□□□□□ -0.63
ECM1-201ENST00000346569 MROH6A6NGR9 719 aa11.08□□□□□ -0.64
ECM1-201ENST00000346569 OTOL1A6NHN0 477 aaPredicted RBP11.08□□□□□ -0.64
ECM1-201ENST00000346569 UGT1A9O60656 530 aa11.08□□□□□ -0.64
ECM1-201ENST00000346569 NFATC1O95644 943 aa11.08□□□□□ -0.64
ECM1-201ENST00000346569 FGF1P05230 155 aa11.08□□□□□ -0.64
ECM1-201ENST00000346569 PDHA1P08559 390 aa11.08□□□□□ -0.64
ECM1-201ENST00000346569 ADH5P11766 374 aa11.08□□□□□ -0.64
ECM1-201ENST00000346569 LAMP2P13473 410 aa11.08□□□□□ -0.64
ECM1-201ENST00000346569 ARSAP15289 507 aa11.08□□□□□ -0.64
ECM1-201ENST00000346569 PSMA3P25788 255 aa11.08□□□□□ -0.64
ECM1-201ENST00000346569 ATP5DP30049 168 aa11.08□□□□□ -0.64
ECM1-201ENST00000346569 ARCN1P48444 511 aaKnown RBP11.08□□□□□ -0.64
ECM1-201ENST00000346569 RHOAP61586 193 aa11.08□□□□□ -0.64
ECM1-201ENST00000346569 PPP2R2AP63151 447 aa11.08□□□□□ -0.64
ECM1-201ENST00000346569 NAB1Q13506 487 aa11.08□□□□□ -0.64
ECM1-201ENST00000346569 PDGFRLQ15198 375 aa11.08□□□□□ -0.64
ECM1-201ENST00000346569 TEDDM1Q5T9Z0 273 aa11.08□□□□□ -0.64
ECM1-201ENST00000346569 MBLAC2Q68D91 279 aa11.08□□□□□ -0.64
ECM1-201ENST00000346569 CES5AQ6NT32 575 aa11.08□□□□□ -0.64
ECM1-201ENST00000346569 ESRP1Q6NXG1 681 aaKnown RBP11.08□□□□□ -0.64
ECM1-201ENST00000346569 VITQ6UXI7 678 aa11.08□□□□□ -0.64
ECM1-201ENST00000346569 SH2D5Q6ZV89 423 aa11.08□□□□□ -0.64
ECM1-201ENST00000346569 MARK2Q7KZI7 788 aaKnown RBP11.08□□□□□ -0.64
ECM1-201ENST00000346569 RNF135Q8IUD6 432 aa11.08□□□□□ -0.64
ECM1-201ENST00000346569 PLPP6Q8IY26 295 aa11.08□□□□□ -0.64
ECM1-201ENST00000346569 BRSK1Q8TDC3 778 aa11.08□□□□□ -0.64
ECM1-201ENST00000346569 ATP2A3Q93084 1043 aa11.08□□□□□ -0.64
ECM1-201ENST00000346569 ZNF669Q96BR6 464 aaPredicted RBP11.08□□□□□ -0.64
ECM1-201ENST00000346569 MRRFQ96E11 262 aaKnown RBP11.08□□□□□ -0.64
ECM1-201ENST00000346569 IFT43Q96FT9 208 aa11.08□□□□□ -0.64
ECM1-201ENST00000346569 CERS2Q96G23 380 aa11.08□□□□□ -0.64
ECM1-201ENST00000346569 RPL10LQ96L21 214 aaKnown RBP11.08□□□□□ -0.64
ECM1-201ENST00000346569 RIPOR3Q96MK2 946 aa11.08□□□□□ -0.64
ECM1-201ENST00000346569 TDRD1Q9BXT4 1180 aaKnown RBP11.08□□□□□ -0.64
ECM1-201ENST00000346569 UGT1A7Q9HAW7 530 aa11.08□□□□□ -0.64
ECM1-201ENST00000346569 UGT1A10Q9HAW8 530 aa11.08□□□□□ -0.64
ECM1-201ENST00000346569 UGT1A8Q9HAW9 530 aa11.08□□□□□ -0.64
ECM1-201ENST00000346569 HPS4Q9NQG7 708 aa11.08□□□□□ -0.64
ECM1-201ENST00000346569 THG1LQ9NWX6 298 aaKnown RBP11.08□□□□□ -0.64
ECM1-201ENST00000346569 SLCO3A1Q9UIG8 710 aa11.08□□□□□ -0.64
ECM1-201ENST00000346569 RIMKLBQ9ULI2 386 aa11.08□□□□□ -0.64
ECM1-201ENST00000346569 CHKBQ9Y259 395 aa11.08□□□□□ -0.64
ECM1-201ENST00000346569 RAI2Q9Y5P3 530 aa11.08□□□□□ -0.64
ECM1-201ENST00000346569 A0A1W2PPM1 405 aa11.07□□□□□ -0.64
ECM1-201ENST00000346569 HEATR9A2RTY3 570 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms