RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 SOAT2O75908 522 aa21.6■■□□□ 1.05
CCDC38-201ENST00000344280 HNRNPLP14866 589 aaKnown RBP eCLIP21.6■■□□□ 1.05
CCDC38-201ENST00000344280 CPB1P15086 417 aa21.6■■□□□ 1.05
CCDC38-201ENST00000344280 ARSAP15289 507 aa21.6■■□□□ 1.05
CCDC38-201ENST00000344280 KCNA5P22460 613 aa21.6■■□□□ 1.05
CCDC38-201ENST00000344280 CRABP2P29373 138 aa21.6■■□□□ 1.05
CCDC38-201ENST00000344280 DSC2Q02487 901 aa21.6■■□□□ 1.05
CCDC38-201ENST00000344280 PSMD5Q16401 504 aa21.6■■□□□ 1.05
CCDC38-201ENST00000344280 LPCAT4Q643R3 524 aa21.6■■□□□ 1.05
CCDC38-201ENST00000344280 LDB1Q86U70 411 aaPredicted RBP21.6■■□□□ 1.05
CCDC38-201ENST00000344280 LCA5Q86VQ0 697 aa21.6■■□□□ 1.05
CCDC38-201ENST00000344280 IMP4Q96G21 291 aaKnown RBP21.6■■□□□ 1.05
CCDC38-201ENST00000344280 ZCWPW1Q9H0M4 648 aa21.6■■□□□ 1.05
CCDC38-201ENST00000344280 SLC25A51Q9H1U9 297 aa21.6■■□□□ 1.05
CCDC38-201ENST00000344280 ZNF385DQ9H6B1 395 aa21.6■■□□□ 1.05
CCDC38-201ENST00000344280 NOD1Q9Y239 953 aa21.6■■□□□ 1.05
CCDC38-201ENST00000344280 MMP2P08253 660 aa21.6■■□□□ 1.05
CCDC38-201ENST00000344280 PAMP19021 973 aa21.6■■□□□ 1.05
CCDC38-201ENST00000344280 SP100P23497 879 aaPredicted RBP21.6■■□□□ 1.05
CCDC38-201ENST00000344280 PRKCZQ05513 592 aa21.6■■□□□ 1.05
CCDC38-201ENST00000344280 EFEMP1Q12805 493 aa21.6■■□□□ 1.05
CCDC38-201ENST00000344280 MSLNQ13421 630 aaPredicted RBP21.6■■□□□ 1.05
CCDC38-201ENST00000344280 MON1AQ86VX9 555 aa21.6■■□□□ 1.05
CCDC38-201ENST00000344280 OR13J1Q8NGT2 312 aa21.6■■□□□ 1.05
CCDC38-201ENST00000344280 GATA6Q92908 595 aa21.6■■□□□ 1.05
CCDC38-201ENST00000344280 PSMG2Q969U7 264 aa21.6■■□□□ 1.05
CCDC38-201ENST00000344280 C1orf74Q96LT6 269 aa21.6■■□□□ 1.05
CCDC38-201ENST00000344280 POMKQ9H5K3 350 aa21.6■■□□□ 1.05
CCDC38-201ENST00000344280 NMRK2Q9NPI5 230 aa21.6■■□□□ 1.05
CCDC38-201ENST00000344280 PRDM5Q9NQX1 630 aaPredicted RBP21.6■■□□□ 1.05
CCDC38-201ENST00000344280 TBC1D13Q9NVG8 400 aa21.6■■□□□ 1.05
CCDC38-201ENST00000344280 SCML2Q9UQR0 700 aa21.6■■□□□ 1.05
CCDC38-201ENST00000344280 MIA3Q5JRA6 1907 aa21.6■■□□□ 1.05
CCDC38-201ENST00000344280 RGSL1A5PLK6 1076 aa21.59■■□□□ 1.05
CCDC38-201ENST00000344280 WASH4PA8MWX3 477 aa21.59■■□□□ 1.05
CCDC38-201ENST00000344280 TBX4P57082 545 aa21.59■■□□□ 1.05
CCDC38-201ENST00000344280 NRG1Q02297 640 aaPredicted RBP21.59■■□□□ 1.05
CCDC38-201ENST00000344280 CIR1Q86X95 450 aaPredicted RBP21.59■■□□□ 1.05
CCDC38-201ENST00000344280 NUP93Q8N1F7 819 aa21.59■■□□□ 1.05
CCDC38-201ENST00000344280 UMODL1-AS1Q8N2C9 162 aa21.59■■□□□ 1.05
CCDC38-201ENST00000344280 ATAD1Q8NBU5 361 aa21.59■■□□□ 1.05
CCDC38-201ENST00000344280 KLHDC9Q8NEP7 349 aa21.59■■□□□ 1.05
CCDC38-201ENST00000344280 SH3RF2Q8TEC5 729 aa21.59■■□□□ 1.05
CCDC38-201ENST00000344280 CYP4F12Q9HCS2 524 aa21.59■■□□□ 1.05
CCDC38-201ENST00000344280 ATP13A1Q9HD20 1204 aa21.59■■□□□ 1.05
CCDC38-201ENST00000344280 TNFRSF12AQ9NP84 129 aa21.59■■□□□ 1.05
CCDC38-201ENST00000344280 CDYLQ9Y232 598 aa21.59■■□□□ 1.05
CCDC38-201ENST00000344280 DOCK4Q8N1I0 1966 aa21.59■■□□□ 1.05
CCDC38-201ENST00000344280 MSX2P35548 267 aaPredicted RBP21.59■■□□□ 1.05
CCDC38-201ENST00000344280 PPARGP37231 505 aaPredicted RBP21.59■■□□□ 1.05
CCDC38-201ENST00000344280 OR1G1P47890 313 aa21.59■■□□□ 1.05
CCDC38-201ENST00000344280 PRKAA2P54646 552 aa21.59■■□□□ 1.05
CCDC38-201ENST00000344280 HNRNPDQ14103 355 aaKnown RBP21.59■■□□□ 1.05
CCDC38-201ENST00000344280 SH2D4BQ5SQS7 431 aa21.59■■□□□ 1.05
CCDC38-201ENST00000344280 TRIM67Q6ZTA4 783 aa21.59■■□□□ 1.05
CCDC38-201ENST00000344280 ACAD11Q709F0 780 aa21.59■■□□□ 1.05
CCDC38-201ENST00000344280 PTAR1Q7Z6K3 402 aaPredicted RBP21.59■■□□□ 1.05
CCDC38-201ENST00000344280 ADGRG6Q86SQ4 1221 aa21.59■■□□□ 1.05
CCDC38-201ENST00000344280 PHC3Q8NDX5 983 aa21.59■■□□□ 1.05
CCDC38-201ENST00000344280 IGSF8Q969P0 613 aa21.59■■□□□ 1.05
CCDC38-201ENST00000344280 B3GALT6Q96L58 329 aa21.59■■□□□ 1.05
CCDC38-201ENST00000344280 MRPL57Q9BQC6 102 aaKnown RBP21.59■■□□□ 1.05
CCDC38-201ENST00000344280 H3BNX3 289 aa21.58■■□□□ 1.05
CCDC38-201ENST00000344280 OAZ2O95190 189 aa21.58■■□□□ 1.05
CCDC38-201ENST00000344280 UBTFL6P0CB48 400 aaPredicted RBP21.58■■□□□ 1.05
CCDC38-201ENST00000344280 THRAP10827 490 aa21.58■■□□□ 1.05
CCDC38-201ENST00000344280 POLD2P49005 469 aa21.58■■□□□ 1.05
CCDC38-201ENST00000344280 NKX3-2P78367 333 aa21.58■■□□□ 1.05
CCDC38-201ENST00000344280 POU4F1Q01851 419 aa21.58■■□□□ 1.05
CCDC38-201ENST00000344280 DSC1Q08554 894 aa21.58■■□□□ 1.05
CCDC38-201ENST00000344280 MIB1Q86YT6 1006 aa21.58■■□□□ 1.05
CCDC38-201ENST00000344280 DSELQ8IZU8 1212 aa21.58■■□□□ 1.05
CCDC38-201ENST00000344280 LINC01599Q8WXQ3 324 aa21.58■■□□□ 1.05
CCDC38-201ENST00000344280 RCN3Q96D15 328 aa21.58■■□□□ 1.05
CCDC38-201ENST00000344280 DDX50Q9BQ39 737 aaKnown RBP21.58■■□□□ 1.05
CCDC38-201ENST00000344280 ARNT2Q9HBZ2 717 aa21.58■■□□□ 1.05
CCDC38-201ENST00000344280 FIS1Q9Y3D6 152 aa21.58■■□□□ 1.05
CCDC38-201ENST00000344280 KCTD3Q9Y597 815 aa21.58■■□□□ 1.05
CCDC38-201ENST00000344280 RAG1P15918 1043 aa21.58■■□□□ 1.04
CCDC38-201ENST00000344280 PEX2P28328 305 aa21.58■■□□□ 1.04
CCDC38-201ENST00000344280 SERPINH1P50454 418 aaKnown RBP21.58■■□□□ 1.04
CCDC38-201ENST00000344280 ARSDP51689 593 aa21.58■■□□□ 1.04
CCDC38-201ENST00000344280 PLK1P53350 603 aa21.58■■□□□ 1.04
CCDC38-201ENST00000344280 SLC12A2P55011 1212 aa21.58■■□□□ 1.04
CCDC38-201ENST00000344280 MBTPS1Q14703 1052 aa21.58■■□□□ 1.04
CCDC38-201ENST00000344280 LBRQ14739 615 aaKnown RBP21.58■■□□□ 1.04
CCDC38-201ENST00000344280 OR52E8Q6IFG1 317 aa21.58■■□□□ 1.04
CCDC38-201ENST00000344280 GLB1LQ6UWU2 654 aa21.58■■□□□ 1.04
CCDC38-201ENST00000344280 ZNF354CQ86Y25 554 aa21.58■■□□□ 1.04
CCDC38-201ENST00000344280 PGBD5Q8N414 524 aa21.58■■□□□ 1.04
CCDC38-201ENST00000344280 CPSF7Q8N684 471 aaKnown RBP21.58■■□□□ 1.04
CCDC38-201ENST00000344280 ANKRD49Q8WVL7 239 aa21.58■■□□□ 1.04
CCDC38-201ENST00000344280 PRKD2Q9BZL6 878 aa21.58■■□□□ 1.04
CCDC38-201ENST00000344280 ZYG11BQ9C0D3 744 aa21.58■■□□□ 1.04
CCDC38-201ENST00000344280 CLIC5Q9NZA1 410 aa21.58■■□□□ 1.04
CCDC38-201ENST00000344280 TLL2Q9Y6L7 1015 aa21.58■■□□□ 1.04
CCDC38-201ENST00000344280 HEATR9A2RTY3 570 aa21.57■■□□□ 1.04
CCDC38-201ENST00000344280 OR51F1A6NGY5 319 aa21.57■■□□□ 1.04
CCDC38-201ENST00000344280 RPLP2P05387 115 aaKnown RBP21.57■■□□□ 1.04
CCDC38-201ENST00000344280 SLC10A3P09131 477 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms