RNA–Protein interactions for RNA: ENST00000344140.5

CACNB1-201, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene CACNB1, Length 1,889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-201ENST00000344140 SMC6Q96SB8 1091 aa22.24■■□□□ 1.15
CACNB1-201ENST00000344140 TRPV4Q9HBA0 871 aa22.24■■□□□ 1.15
CACNB1-201ENST00000344140 GGA2Q9UJY4 613 aa22.24■■□□□ 1.15
CACNB1-201ENST00000344140 FCF1Q9Y324 198 aaKnown RBP22.24■■□□□ 1.15
CACNB1-201ENST00000344140 LINC01565O15544 149 aa22.24■■□□□ 1.15
CACNB1-201ENST00000344140 MT-CO1P00395 513 aa22.24■■□□□ 1.15
CACNB1-201ENST00000344140 SNRPAP09012 282 aaKnown RBP22.24■■□□□ 1.15
CACNB1-201ENST00000344140 ERVK-10P10266 1014 aa22.24■■□□□ 1.15
CACNB1-201ENST00000344140 PABPC1P11940 636 aaKnown RBP22.24■■□□□ 1.15
CACNB1-201ENST00000344140 ALADP13716 330 aa22.24■■□□□ 1.15
CACNB1-201ENST00000344140 PAMP19021 973 aa22.24■■□□□ 1.15
CACNB1-201ENST00000344140 CA4P22748 312 aa22.24■■□□□ 1.15
CACNB1-201ENST00000344140 VIPR2P41587 438 aa22.24■■□□□ 1.15
CACNB1-201ENST00000344140 AP1S1P61966 158 aa22.24■■□□□ 1.15
CACNB1-201ENST00000344140 SULT2A1Q06520 285 aa22.24■■□□□ 1.15
CACNB1-201ENST00000344140 MSLNQ13421 630 aaPredicted RBP22.24■■□□□ 1.15
CACNB1-201ENST00000344140 TERF2Q15554 542 aa22.24■■□□□ 1.15
CACNB1-201ENST00000344140 PDPK2PQ6A1A2 396 aa22.24■■□□□ 1.15
CACNB1-201ENST00000344140 GAS2L1Q99501 681 aaPredicted RBP22.24■■□□□ 1.15
CACNB1-201ENST00000344140 C2orf16Q68DN1 1984 aa22.23■■□□□ 1.15
CACNB1-201ENST00000344140 FOXO6A8MYZ6 492 aa22.23■■□□□ 1.15
CACNB1-201ENST00000344140 PAPSS2O95340 614 aaPredicted RBP22.23■■□□□ 1.15
CACNB1-201ENST00000344140 ADH1CP00326 375 aa22.23■■□□□ 1.15
CACNB1-201ENST00000344140 GBP2P32456 591 aaPredicted RBP22.23■■□□□ 1.15
CACNB1-201ENST00000344140 MAPK8P45983 427 aa22.23■■□□□ 1.15
CACNB1-201ENST00000344140 SEPT6Q14141 434 aa22.23■■□□□ 1.15
CACNB1-201ENST00000344140 DHCR24Q15392 516 aa22.23■■□□□ 1.15
CACNB1-201ENST00000344140 HABP4Q5JVS0 413 aaKnown RBP22.23■■□□□ 1.15
CACNB1-201ENST00000344140 NCEH1Q6PIU2 408 aa22.23■■□□□ 1.15
CACNB1-201ENST00000344140 KCNMB4Q86W47 210 aa22.23■■□□□ 1.15
CACNB1-201ENST00000344140 RSPRY1Q96DX4 576 aa22.23■■□□□ 1.15
CACNB1-201ENST00000344140 TDRD1Q9BXT4 1180 aaKnown RBP22.23■■□□□ 1.15
CACNB1-201ENST00000344140 C20orf96Q9NUD7 363 aaPredicted RBP22.23■■□□□ 1.15
CACNB1-201ENST00000344140 TXNDC16Q9P2K2 825 aa22.23■■□□□ 1.15
CACNB1-201ENST00000344140 SHOX2O60902 331 aaPredicted RBP22.22■■□□□ 1.15
CACNB1-201ENST00000344140 MT-ND3P03897 115 aa22.22■■□□□ 1.15
CACNB1-201ENST00000344140 IGFBP4P22692 258 aa22.22■■□□□ 1.15
CACNB1-201ENST00000344140 CSNK1DP48730 415 aa22.22■■□□□ 1.15
CACNB1-201ENST00000344140 ADAM15Q13444 863 aa22.22■■□□□ 1.15
CACNB1-201ENST00000344140 FUT11Q495W5 492 aa22.22■■□□□ 1.15
CACNB1-201ENST00000344140 ATAT1Q5SQI0 421 aa22.22■■□□□ 1.15
CACNB1-201ENST00000344140 SRLQ86TD4 932 aa22.22■■□□□ 1.15
CACNB1-201ENST00000344140 RNF135Q8IUD6 432 aa22.22■■□□□ 1.15
CACNB1-201ENST00000344140 DDX51Q8N8A6 666 aaKnown RBP eCLIP22.22■■□□□ 1.15
CACNB1-201ENST00000344140 ALKBH8Q96BT7 664 aaKnown RBP22.22■■□□□ 1.15
CACNB1-201ENST00000344140 ZNF778Q96MU6 729 aa22.22■■□□□ 1.15
CACNB1-201ENST00000344140 CPNE1Q99829 537 aa22.22■■□□□ 1.15
CACNB1-201ENST00000344140 SSU72Q9NP77 194 aaKnown RBP22.22■■□□□ 1.15
CACNB1-201ENST00000344140 KCNK9Q9NPC2 374 aa22.22■■□□□ 1.15
CACNB1-201ENST00000344140 TREX1Q9NSU2 369 aa22.22■■□□□ 1.15
CACNB1-201ENST00000344140 SMG5Q9UPR3 1016 aaKnown RBP22.22■■□□□ 1.15
CACNB1-201ENST00000344140 HS3ST2Q9Y278 367 aa22.22■■□□□ 1.15
CACNB1-201ENST00000344140 RAI2Q9Y5P3 530 aa22.22■■□□□ 1.15
CACNB1-201ENST00000344140 MIA3Q5JRA6 1907 aa22.22■■□□□ 1.15
CACNB1-201ENST00000344140 CDH23Q9H251 3354 aa22.22■■□□□ 1.15
CACNB1-201ENST00000344140 TMEM120BA0PK00 339 aa22.22■■□□□ 1.15
CACNB1-201ENST00000344140 K7ERQ8 282 aa22.22■■□□□ 1.15
CACNB1-201ENST00000344140 UGT1A9O60656 530 aa22.22■■□□□ 1.15
CACNB1-201ENST00000344140 FAM155BO75949 473 aa22.22■■□□□ 1.15
CACNB1-201ENST00000344140 CREB1P16220 341 aa22.22■■□□□ 1.15
CACNB1-201ENST00000344140 EML3Q32P44 896 aa22.22■■□□□ 1.15
CACNB1-201ENST00000344140 ASTLQ6HA08 431 aaPredicted RBP22.22■■□□□ 1.15
CACNB1-201ENST00000344140 ADGRE3Q9BY15 652 aa22.22■■□□□ 1.15
CACNB1-201ENST00000344140 UGT1A7Q9HAW7 530 aa22.22■■□□□ 1.15
CACNB1-201ENST00000344140 UGT1A10Q9HAW8 530 aa22.22■■□□□ 1.15
CACNB1-201ENST00000344140 UGT1A8Q9HAW9 530 aa22.22■■□□□ 1.15
CACNB1-201ENST00000344140 NSMCE4AQ9NXX6 385 aa22.22■■□□□ 1.15
CACNB1-201ENST00000344140 SLC25A13Q9UJS0 675 aa22.22■■□□□ 1.15
CACNB1-201ENST00000344140 CDH7Q9ULB5 785 aa22.22■■□□□ 1.15
CACNB1-201ENST00000344140 A0A1W2PPM1 405 aa22.21■■□□□ 1.15
CACNB1-201ENST00000344140 HOXC11O43248 304 aaPredicted RBP22.21■■□□□ 1.15
CACNB1-201ENST00000344140 CYP17A1P05093 508 aa22.21■■□□□ 1.15
CACNB1-201ENST00000344140 GUCY1A3Q02108 690 aa22.21■■□□□ 1.15
CACNB1-201ENST00000344140 KIAA0930Q6ICG6 404 aaPredicted RBP22.21■■□□□ 1.15
CACNB1-201ENST00000344140 CES5AQ6NT32 575 aa22.21■■□□□ 1.15
CACNB1-201ENST00000344140 PACS1Q6VY07 963 aa22.21■■□□□ 1.15
CACNB1-201ENST00000344140 PEX13Q92968 403 aa22.21■■□□□ 1.15
CACNB1-201ENST00000344140 E2F7Q96AV8 911 aa22.21■■□□□ 1.15
CACNB1-201ENST00000344140 ISG20Q96AZ6 181 aaKnown RBP22.21■■□□□ 1.15
CACNB1-201ENST00000344140 CENPTQ96BT3 561 aa22.21■■□□□ 1.15
CACNB1-201ENST00000344140 NSMCE3Q96MG7 304 aa22.21■■□□□ 1.15
CACNB1-201ENST00000344140 THG1LQ9NWX6 298 aaKnown RBP22.21■■□□□ 1.15
CACNB1-201ENST00000344140 CHKBQ9Y259 395 aa22.21■■□□□ 1.15
CACNB1-201ENST00000344140 MROH6A6NGR9 719 aa22.2■■□□□ 1.14
CACNB1-201ENST00000344140 PRPF4O43172 522 aaKnown RBP eCLIP22.2■■□□□ 1.14
CACNB1-201ENST00000344140 SMAD6O43541 496 aaKnown RBP22.2■■□□□ 1.14
CACNB1-201ENST00000344140 NFATC1O95644 943 aa22.2■■□□□ 1.14
CACNB1-201ENST00000344140 ADH5P11766 374 aa22.2■■□□□ 1.14
CACNB1-201ENST00000344140 CHN1P15882 459 aa22.2■■□□□ 1.14
CACNB1-201ENST00000344140 KRT4P19013 534 aa22.2■■□□□ 1.14
CACNB1-201ENST00000344140 GP5P40197 560 aa22.2■■□□□ 1.14
CACNB1-201ENST00000344140 SLC18A1P54219 525 aa22.2■■□□□ 1.14
CACNB1-201ENST00000344140 GNGT1P63211 74 aa22.2■■□□□ 1.14
CACNB1-201ENST00000344140 DNAJC3Q13217 504 aa22.2■■□□□ 1.14
CACNB1-201ENST00000344140 GALNT3Q14435 633 aa22.2■■□□□ 1.14
CACNB1-201ENST00000344140 HSP90AA5PQ58FG0 334 aa22.2■■□□□ 1.14
CACNB1-201ENST00000344140 TSTD2Q5T7W7 516 aa22.2■■□□□ 1.14
CACNB1-201ENST00000344140 TEDDM1Q5T9Z0 273 aa22.2■■□□□ 1.14
CACNB1-201ENST00000344140 GPR153Q6NV75 609 aa22.2■■□□□ 1.14
CACNB1-201ENST00000344140 ESRP1Q6NXG1 681 aaKnown RBP22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms