RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 RNF103O00237 685 aa13.71□□□□□ -0.21
HERPUD1-202ENST00000344114 RGS16O15492 202 aaPredicted RBP13.71□□□□□ -0.21
HERPUD1-202ENST00000344114 TRIM16O95361 564 aa13.71□□□□□ -0.21
HERPUD1-202ENST00000344114 MOCS2O96007 188 aaPredicted RBP13.71□□□□□ -0.21
HERPUD1-202ENST00000344114 NR1D1P20393 614 aa13.71□□□□□ -0.21
HERPUD1-202ENST00000344114 ATP5DP30049 168 aa13.71□□□□□ -0.21
HERPUD1-202ENST00000344114 PHBP35232 272 aa13.71□□□□□ -0.21
HERPUD1-202ENST00000344114 GARSP41250 739 aaKnown RBP13.71□□□□□ -0.21
HERPUD1-202ENST00000344114 KIR2DL1P43626 348 aaPredicted RBP13.71□□□□□ -0.21
HERPUD1-202ENST00000344114 SIM1P81133 766 aaPredicted RBP13.71□□□□□ -0.21
HERPUD1-202ENST00000344114 CDK16Q00536 496 aa13.71□□□□□ -0.21
HERPUD1-202ENST00000344114 MESP2Q0VG99 397 aa13.71□□□□□ -0.21
HERPUD1-202ENST00000344114 UBAP2Q5T6F2 1119 aaKnown RBP13.71□□□□□ -0.21
HERPUD1-202ENST00000344114 LYSMD4Q5XG99 296 aa13.71□□□□□ -0.21
HERPUD1-202ENST00000344114 RWDD4Q6NW29 188 aaKnown RBP13.71□□□□□ -0.21
HERPUD1-202ENST00000344114 ARMCX6Q7L4S7 300 aa13.71□□□□□ -0.21
HERPUD1-202ENST00000344114 SFTPA1Q8IWL2 248 aa13.71□□□□□ -0.21
HERPUD1-202ENST00000344114 ADGRG2Q8IZP9 1017 aa13.71□□□□□ -0.21
HERPUD1-202ENST00000344114 TAB3Q8N5C8 712 aaPredicted RBP13.71□□□□□ -0.21
HERPUD1-202ENST00000344114 ARFGAP2Q8N6H7 521 aa13.71□□□□□ -0.21
HERPUD1-202ENST00000344114 NPWQ8N729 165 aa13.71□□□□□ -0.21
HERPUD1-202ENST00000344114 TXNDC5Q8NBS9 432 aaKnown RBP13.71□□□□□ -0.21
HERPUD1-202ENST00000344114 TLCD1Q96CP7 247 aa13.71□□□□□ -0.21
HERPUD1-202ENST00000344114 C9orf72Q96LT7 481 aa13.71□□□□□ -0.21
HERPUD1-202ENST00000344114 VAT1Q99536 393 aa13.71□□□□□ -0.21
HERPUD1-202ENST00000344114 ETNK1Q9HBU6 452 aa13.71□□□□□ -0.21
HERPUD1-202ENST00000344114 PPARGC1AQ9UBK2 798 aaKnown RBP13.71□□□□□ -0.21
HERPUD1-202ENST00000344114 ATXN2Q99700 1313 aaKnown RBP13.71□□□□□ -0.22
HERPUD1-202ENST00000344114 MAP3K13O43283 966 aa13.71□□□□□ -0.22
HERPUD1-202ENST00000344114 TLR5O60602 858 aa13.71□□□□□ -0.22
HERPUD1-202ENST00000344114 SPAG6O75602 509 aa13.71□□□□□ -0.22
HERPUD1-202ENST00000344114 KLF8O95600 359 aaPredicted RBP13.71□□□□□ -0.22
HERPUD1-202ENST00000344114 OLFM2O95897 454 aa13.71□□□□□ -0.22
HERPUD1-202ENST00000344114 AGTP01019 485 aa13.71□□□□□ -0.22
HERPUD1-202ENST00000344114 TIE1P35590 1138 aa13.71□□□□□ -0.22
HERPUD1-202ENST00000344114 PPP3CCP48454 512 aa13.71□□□□□ -0.22
HERPUD1-202ENST00000344114 TUBP50607 506 aa13.71□□□□□ -0.22
HERPUD1-202ENST00000344114 SLC7A9P82251 487 aa13.71□□□□□ -0.22
HERPUD1-202ENST00000344114 SARNPP82979 210 aaKnown RBP13.71□□□□□ -0.22
HERPUD1-202ENST00000344114 SKOR1P84550 965 aa13.71□□□□□ -0.22
HERPUD1-202ENST00000344114 FASTKD3Q14CZ7 662 aaKnown RBP13.71□□□□□ -0.22
HERPUD1-202ENST00000344114 DHCR24Q15392 516 aa13.71□□□□□ -0.22
HERPUD1-202ENST00000344114 TERF2Q15554 542 aa13.71□□□□□ -0.22
HERPUD1-202ENST00000344114 CCDC38Q502W7 563 aa13.71□□□□□ -0.22
HERPUD1-202ENST00000344114 DNAJC21Q5F1R6 531 aaKnown RBP13.71□□□□□ -0.22
HERPUD1-202ENST00000344114 EOGTQ5NDL2 527 aa13.71□□□□□ -0.22
HERPUD1-202ENST00000344114 EMC10Q5UCC4 262 aa13.71□□□□□ -0.22
HERPUD1-202ENST00000344114 PIK3R6Q5UE93 754 aa13.71□□□□□ -0.22
HERPUD1-202ENST00000344114 NUGGCQ68CJ6 796 aa13.71□□□□□ -0.22
HERPUD1-202ENST00000344114 KCTD16Q68DU8 428 aa13.71□□□□□ -0.22
HERPUD1-202ENST00000344114 KLHDC10Q6PID8 442 aa13.71□□□□□ -0.22
HERPUD1-202ENST00000344114 KDM7AQ6ZMT4 941 aa13.71□□□□□ -0.22
HERPUD1-202ENST00000344114 PROSER1Q86XN7 944 aa13.71□□□□□ -0.22
HERPUD1-202ENST00000344114 LRRC49Q8IUZ0 686 aa13.71□□□□□ -0.22
HERPUD1-202ENST00000344114 RTL3Q8N8U3 475 aaKnown RBP13.71□□□□□ -0.22
HERPUD1-202ENST00000344114 UHMK1Q8TAS1 419 aaKnown RBP13.71□□□□□ -0.22
HERPUD1-202ENST00000344114 EPS8L3Q8TE67 593 aaKnown RBP13.71□□□□□ -0.22
HERPUD1-202ENST00000344114 PYROXD1Q8WU10 500 aa13.71□□□□□ -0.22
HERPUD1-202ENST00000344114 LRRC39Q96DD0 335 aa13.71□□□□□ -0.22
HERPUD1-202ENST00000344114 XAB2Q9HCS7 855 aaKnown RBP13.71□□□□□ -0.22
HERPUD1-202ENST00000344114 CACNA1EQ15878 2313 aa13.7□□□□□ -0.22
HERPUD1-202ENST00000344114 LAMA5O15230 3695 aa13.7□□□□□ -0.22
HERPUD1-202ENST00000344114 DSPP15924 2871 aaKnown RBP13.7□□□□□ -0.22
HERPUD1-202ENST00000344114 PLXNB3Q9ULL4 1909 aa13.7□□□□□ -0.22
HERPUD1-202ENST00000344114 SLC12A8A0AV02 714 aa13.7□□□□□ -0.22
HERPUD1-202ENST00000344114 A6NNZ2 444 aa13.7□□□□□ -0.22
HERPUD1-202ENST00000344114 E7EVH7 732 aa13.7□□□□□ -0.22
HERPUD1-202ENST00000344114 ADAM23O75077 832 aa13.7□□□□□ -0.22
HERPUD1-202ENST00000344114 KAT7O95251 611 aa13.7□□□□□ -0.22
HERPUD1-202ENST00000344114 METTL18O95568 372 aa13.7□□□□□ -0.22
HERPUD1-202ENST00000344114 APODP05090 189 aa13.7□□□□□ -0.22
HERPUD1-202ENST00000344114 APRTP07741 180 aa13.7□□□□□ -0.22
HERPUD1-202ENST00000344114 ITPKAP23677 461 aa13.7□□□□□ -0.22
HERPUD1-202ENST00000344114 SLC6A11P48066 632 aa13.7□□□□□ -0.22
HERPUD1-202ENST00000344114 GYS2P54840 703 aa13.7□□□□□ -0.22
HERPUD1-202ENST00000344114 GAD2Q05329 585 aa13.7□□□□□ -0.22
HERPUD1-202ENST00000344114 WASHC5Q12768 1159 aa13.7□□□□□ -0.22
HERPUD1-202ENST00000344114 DUOXA1Q1HG43 343 aa13.7□□□□□ -0.22
HERPUD1-202ENST00000344114 PARP6Q2NL67 630 aa13.7□□□□□ -0.22
HERPUD1-202ENST00000344114 BBS9Q3SYG4 887 aa13.7□□□□□ -0.22
HERPUD1-202ENST00000344114 TUBB8Q3ZCM7 444 aa13.7□□□□□ -0.22
HERPUD1-202ENST00000344114 MS4A13Q5J8X5 152 aa13.7□□□□□ -0.22
HERPUD1-202ENST00000344114 FNBP1LQ5T0N5 605 aa13.7□□□□□ -0.22
HERPUD1-202ENST00000344114 FAXCQ5TGI0 409 aa13.7□□□□□ -0.22
HERPUD1-202ENST00000344114 ITPRIPL1Q6GPH6 555 aa13.7□□□□□ -0.22
HERPUD1-202ENST00000344114 LRRC31Q6UY01 552 aa13.7□□□□□ -0.22
HERPUD1-202ENST00000344114 RAB44Q7Z6P3 723 aaPredicted RBP13.7□□□□□ -0.22
HERPUD1-202ENST00000344114 C12orf40Q86WS4 652 aa13.7□□□□□ -0.22
HERPUD1-202ENST00000344114 CCDC13Q8IYE1 715 aa13.7□□□□□ -0.22
HERPUD1-202ENST00000344114 SH2D3CQ8N5H7 860 aa13.7□□□□□ -0.22
HERPUD1-202ENST00000344114 ATPAF2Q8N5M1 289 aa13.7□□□□□ -0.22
HERPUD1-202ENST00000344114 CEP76Q8TAP6 659 aa13.7□□□□□ -0.22
HERPUD1-202ENST00000344114 LRRN4Q8WUT4 740 aa13.7□□□□□ -0.22
HERPUD1-202ENST00000344114 TSGA13Q96PP4 275 aa13.7□□□□□ -0.22
HERPUD1-202ENST00000344114 RNF38Q9H0F5 515 aa13.7□□□□□ -0.22
HERPUD1-202ENST00000344114 CCSER2Q9H7U1 834 aa13.7□□□□□ -0.22
HERPUD1-202ENST00000344114 VPS37BQ9H9H4 285 aa13.7□□□□□ -0.22
HERPUD1-202ENST00000344114 CAPN10Q9HC96 672 aa13.7□□□□□ -0.22
HERPUD1-202ENST00000344114 LRRC4CQ9HCJ2 640 aa13.7□□□□□ -0.22
HERPUD1-202ENST00000344114 TRPM5Q9NZQ8 1165 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms