RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 FAM208BQ5VWN6 2430 aa18.27■□□□□ 0.52
USF2-202ENST00000343550 TBC1D3DA0A087WVF3 549 aa18.27■□□□□ 0.51
USF2-202ENST00000343550 TBC1D3IA0A087WXS9 549 aa18.27■□□□□ 0.51
USF2-202ENST00000343550 TBC1D3EA0A087X179 549 aa18.27■□□□□ 0.51
USF2-202ENST00000343550 TBC1D3KA0A087X1G2 549 aa18.27■□□□□ 0.51
USF2-202ENST00000343550 TBC1D3FA6NER0 549 aaPredicted RBP18.27■□□□□ 0.51
USF2-202ENST00000343550 BTNL10A8MVZ5 291 aa18.27■□□□□ 0.51
USF2-202ENST00000343550 TBC1D3LB9A6J9 549 aa18.27■□□□□ 0.51
USF2-202ENST00000343550 KPNA3O00505 521 aaPredicted RBP18.27■□□□□ 0.51
USF2-202ENST00000343550 WNT9AO14904 365 aa18.27■□□□□ 0.51
USF2-202ENST00000343550 PJA2O43164 708 aa18.27■□□□□ 0.51
USF2-202ENST00000343550 POP4O95707 220 aaKnown RBP18.27■□□□□ 0.51
USF2-202ENST00000343550 TBC1D3HP0C7X1 549 aa18.27■□□□□ 0.51
USF2-202ENST00000343550 CD38P28907 300 aa18.27■□□□□ 0.51
USF2-202ENST00000343550 IL10RBQ08334 325 aa18.27■□□□□ 0.51
USF2-202ENST00000343550 TBC1D3GQ6DHY5 549 aa18.27■□□□□ 0.51
USF2-202ENST00000343550 TBC1D3CQ6IPX1 549 aa18.27■□□□□ 0.51
USF2-202ENST00000343550 RHOT1Q8IXI2 618 aa18.27■□□□□ 0.51
USF2-202ENST00000343550 TBC1D3Q8IZP1 549 aaPredicted RBP18.27■□□□□ 0.51
USF2-202ENST00000343550 GRIN3AQ8TCU5 1115 aa18.27■□□□□ 0.51
USF2-202ENST00000343550 SERAC1Q96JX3 654 aa18.27■□□□□ 0.51
USF2-202ENST00000343550 GOLPH3Q9H4A6 298 aa18.27■□□□□ 0.51
USF2-202ENST00000343550 A0A1W2PR77 199 aa18.26■□□□□ 0.51
USF2-202ENST00000343550 C3orf70A6NLC5 250 aaPredicted RBP18.26■□□□□ 0.51
USF2-202ENST00000343550 SPOPO43791 374 aa18.26■□□□□ 0.51
USF2-202ENST00000343550 GKP32189 559 aa18.26■□□□□ 0.51
USF2-202ENST00000343550 SERPINB6P35237 376 aa18.26■□□□□ 0.51
USF2-202ENST00000343550 VAV2P52735 878 aa18.26■□□□□ 0.51
USF2-202ENST00000343550 PAFAH1B3Q15102 231 aaKnown RBP18.26■□□□□ 0.51
USF2-202ENST00000343550 INAVAQ3KP66 663 aa18.26■□□□□ 0.51
USF2-202ENST00000343550 ATXN7L2Q5T6C5 722 aaPredicted RBP18.26■□□□□ 0.51
USF2-202ENST00000343550 GALNT15Q8N3T1 639 aa18.26■□□□□ 0.51
USF2-202ENST00000343550 RYBPQ8N488 228 aaPredicted RBP18.26■□□□□ 0.51
USF2-202ENST00000343550 PQLC3Q8N755 202 aa18.26■□□□□ 0.51
USF2-202ENST00000343550 OR6K2Q8NGY2 324 aa18.26■□□□□ 0.51
USF2-202ENST00000343550 TPCN2Q8NHX9 752 aa18.26■□□□□ 0.51
USF2-202ENST00000343550 ARRDC3Q96B67 414 aa18.26■□□□□ 0.51
USF2-202ENST00000343550 LRIG1Q96JA1 1093 aa18.26■□□□□ 0.51
USF2-202ENST00000343550 RNF157Q96PX1 679 aa18.26■□□□□ 0.51
USF2-202ENST00000343550 GRPEL1Q9HAV7 217 aa18.26■□□□□ 0.51
USF2-202ENST00000343550 SP110Q9HB58 689 aa18.26■□□□□ 0.51
USF2-202ENST00000343550 TMEM131Q92545 1883 aa18.26■□□□□ 0.51
USF2-202ENST00000343550 PKD1L2Q7Z442 2459 aa18.25■□□□□ 0.51
USF2-202ENST00000343550 PLXNB3Q9ULL4 1909 aa18.25■□□□□ 0.51
USF2-202ENST00000343550 LRRD1A4D1F6 860 aa18.25■□□□□ 0.51
USF2-202ENST00000343550 SLC7A4O43246 635 aa18.25■□□□□ 0.51
USF2-202ENST00000343550 LATO43561 262 aa18.25■□□□□ 0.51
USF2-202ENST00000343550 MAFKO60675 156 aa18.25■□□□□ 0.51
USF2-202ENST00000343550 PALMO75781 387 aa18.25■□□□□ 0.51
USF2-202ENST00000343550 TNNT1P13805 278 aa18.25■□□□□ 0.51
USF2-202ENST00000343550 RHOAP61586 193 aa18.25■□□□□ 0.51
USF2-202ENST00000343550 AGBL4Q5VU57 503 aa18.25■□□□□ 0.51
USF2-202ENST00000343550 NCBP2-AS2Q69YL0 99 aa18.25■□□□□ 0.51
USF2-202ENST00000343550 GATAD2AQ86YP4 633 aa18.25■□□□□ 0.51
USF2-202ENST00000343550 CALR3Q96L12 384 aaKnown RBP18.25■□□□□ 0.51
USF2-202ENST00000343550 KDM4CQ9H3R0 1056 aa18.25■□□□□ 0.51
USF2-202ENST00000343550 ZDHHC6Q9H6R6 413 aa18.25■□□□□ 0.51
USF2-202ENST00000343550 DDX56Q9NY93 547 aaKnown RBP18.25■□□□□ 0.51
USF2-202ENST00000343550 LHX3Q9UBR4 397 aa18.25■□□□□ 0.51
USF2-202ENST00000343550 FTSJ1Q9UET6 329 aa18.25■□□□□ 0.51
USF2-202ENST00000343550 LHX6Q9UPM6 363 aa18.25■□□□□ 0.51
USF2-202ENST00000343550 ZNF487B1APH4 448 aa18.24■□□□□ 0.51
USF2-202ENST00000343550 KRIT1O00522 736 aa18.24■□□□□ 0.51
USF2-202ENST00000343550 PPP2CBP62714 309 aa18.24■□□□□ 0.51
USF2-202ENST00000343550 PPP2CAP67775 309 aa18.24■□□□□ 0.51
USF2-202ENST00000343550 RFTN1Q14699 578 aaPredicted RBP18.24■□□□□ 0.51
USF2-202ENST00000343550 SHBQ15464 509 aa18.24■□□□□ 0.51
USF2-202ENST00000343550 CCDC157Q569K6 752 aa18.24■□□□□ 0.51
USF2-202ENST00000343550 PIP5KL1Q5T9C9 394 aa18.24■□□□□ 0.51
USF2-202ENST00000343550 C11orf63Q6NUN7 778 aa18.24■□□□□ 0.51
USF2-202ENST00000343550 KIAA1328Q86T90 577 aa18.24■□□□□ 0.51
USF2-202ENST00000343550 VSIG1Q86XK7 387 aa18.24■□□□□ 0.51
USF2-202ENST00000343550 MARCH9Q86YJ5 346 aa18.24■□□□□ 0.51
USF2-202ENST00000343550 LRRC49Q8IUZ0 686 aa18.24■□□□□ 0.51
USF2-202ENST00000343550 MDM1Q8TC05 714 aa18.24■□□□□ 0.51
USF2-202ENST00000343550 GDAP1L1Q96MZ0 367 aa18.24■□□□□ 0.51
USF2-202ENST00000343550 DESI2Q9BSY9 194 aa18.24■□□□□ 0.51
USF2-202ENST00000343550 HDAC8Q9BY41 377 aa18.24■□□□□ 0.51
USF2-202ENST00000343550 GDF3Q9NR23 364 aa18.24■□□□□ 0.51
USF2-202ENST00000343550 PLXNA2O75051 1894 aa18.24■□□□□ 0.51
USF2-202ENST00000343550 GOLGA6L3A6NEY3 463 aa18.23■□□□□ 0.51
USF2-202ENST00000343550 TLR4O00206 839 aa18.23■□□□□ 0.51
USF2-202ENST00000343550 PLRG1O43660 514 aaKnown RBP18.23■□□□□ 0.51
USF2-202ENST00000343550 IGSF6O95976 241 aa18.23■□□□□ 0.51
USF2-202ENST00000343550 PEX11BO96011 259 aa18.23■□□□□ 0.51
USF2-202ENST00000343550 ITGAVP06756 1048 aa18.23■□□□□ 0.51
USF2-202ENST00000343550 TAS2R38P59533 333 aa18.23■□□□□ 0.51
USF2-202ENST00000343550 RAD51Q06609 339 aa18.23■□□□□ 0.51
USF2-202ENST00000343550 SLC10A7Q0GE19 358 aa18.23■□□□□ 0.51
USF2-202ENST00000343550 CCDC15Q0P6D6 951 aa18.23■□□□□ 0.51
USF2-202ENST00000343550 SLC45A4Q5BKX6 768 aa18.23■□□□□ 0.51
USF2-202ENST00000343550 ERN2Q76MJ5 926 aaKnown RBP18.23■□□□□ 0.51
USF2-202ENST00000343550 DAAM2Q86T65 1068 aa18.23■□□□□ 0.51
USF2-202ENST00000343550 PRPF39Q86UA1 669 aaKnown RBP18.23■□□□□ 0.51
USF2-202ENST00000343550 TSEN2Q8NCE0 465 aaKnown RBP18.23■□□□□ 0.51
USF2-202ENST00000343550 SAP25Q8TEE9 199 aa18.23■□□□□ 0.51
USF2-202ENST00000343550 RNF25Q96BH1 459 aaPredicted RBP18.23■□□□□ 0.51
USF2-202ENST00000343550 PPP1R16AQ96I34 528 aa18.23■□□□□ 0.51
USF2-202ENST00000343550 ZNF599Q96NL3 588 aa18.23■□□□□ 0.51
USF2-202ENST00000343550 CPEB1Q9BZB8 566 aaKnown RBP18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms