RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 CRLF3Q8IUI8 442 aa18.78■□□□□ 0.6
HOXA9-201ENST00000343483 ARID3BQ8IVW6 561 aaPredicted RBP18.78■□□□□ 0.6
HOXA9-201ENST00000343483 PRR11Q96HE9 360 aaPredicted RBP18.78■□□□□ 0.6
HOXA9-201ENST00000343483 RHOJQ9H4E5 214 aa18.78■□□□□ 0.6
HOXA9-201ENST00000343483 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.78■□□□□ 0.6
HOXA9-201ENST00000343483 GSRP00390 522 aa18.78■□□□□ 0.6
HOXA9-201ENST00000343483 AHSGP02765 367 aa18.78■□□□□ 0.6
HOXA9-201ENST00000343483 PROCP04070 461 aa18.78■□□□□ 0.6
HOXA9-201ENST00000343483 MPOP05164 745 aa18.78■□□□□ 0.6
HOXA9-201ENST00000343483 KCNA4P22459 653 aa18.78■□□□□ 0.6
HOXA9-201ENST00000343483 OXCT1P55809 520 aa18.78■□□□□ 0.6
HOXA9-201ENST00000343483 IRF9Q00978 393 aa18.78■□□□□ 0.6
HOXA9-201ENST00000343483 STX3Q13277 289 aa18.78■□□□□ 0.6
HOXA9-201ENST00000343483 ZNF177Q13360 481 aaPredicted RBP18.78■□□□□ 0.6
HOXA9-201ENST00000343483 UGP2Q16851 508 aa18.78■□□□□ 0.6
HOXA9-201ENST00000343483 ZNF470Q6ECI4 717 aa18.78■□□□□ 0.6
HOXA9-201ENST00000343483 KIAA0930Q6ICG6 404 aaPredicted RBP18.78■□□□□ 0.6
HOXA9-201ENST00000343483 RAPH1Q70E73 1250 aa18.78■□□□□ 0.6
HOXA9-201ENST00000343483 C16orf59Q7L2K0 433 aa18.78■□□□□ 0.6
HOXA9-201ENST00000343483 CNTN4Q8IWV2 1026 aa18.78■□□□□ 0.6
HOXA9-201ENST00000343483 TTC16Q8NEE8 873 aa18.78■□□□□ 0.6
HOXA9-201ENST00000343483 NSL1Q96IY1 281 aa18.78■□□□□ 0.6
HOXA9-201ENST00000343483 ZNF599Q96NL3 588 aa18.78■□□□□ 0.6
HOXA9-201ENST00000343483 GPR22Q99680 433 aa18.78■□□□□ 0.6
HOXA9-201ENST00000343483 ZNF334Q9HCZ1 680 aaPredicted RBP18.78■□□□□ 0.6
HOXA9-201ENST00000343483 PCDHB12Q9Y5F1 795 aa18.78■□□□□ 0.6
HOXA9-201ENST00000343483 SNNO75324 88 aaPredicted RBP18.77■□□□□ 0.6
HOXA9-201ENST00000343483 WFS1O76024 890 aa18.77■□□□□ 0.6
HOXA9-201ENST00000343483 FGF18O76093 207 aa18.77■□□□□ 0.6
HOXA9-201ENST00000343483 RHOCP08134 193 aa18.77■□□□□ 0.6
HOXA9-201ENST00000343483 GLDCP23378 1020 aa18.77■□□□□ 0.6
HOXA9-201ENST00000343483 GABRB3P28472 473 aa18.77■□□□□ 0.6
HOXA9-201ENST00000343483 SLC1A2P43004 574 aa18.77■□□□□ 0.6
HOXA9-201ENST00000343483 SMAD3P84022 425 aaKnown RBP18.77■□□□□ 0.6
HOXA9-201ENST00000343483 PLD6Q8N2A8 252 aaKnown RBP18.77■□□□□ 0.6
HOXA9-201ENST00000343483 TADA1Q96BN2 335 aa18.77■□□□□ 0.6
HOXA9-201ENST00000343483 PTCD3Q96EY7 689 aaKnown RBP18.77■□□□□ 0.6
HOXA9-201ENST00000343483 IFT43Q96FT9 208 aa18.77■□□□□ 0.6
HOXA9-201ENST00000343483 SLC22A12Q96S37 553 aa18.77■□□□□ 0.6
HOXA9-201ENST00000343483 RETREG1Q9H6L5 497 aa18.77■□□□□ 0.6
HOXA9-201ENST00000343483 A0A1B0GVM2 712 aa18.77■□□□□ 0.59
HOXA9-201ENST00000343483 TCAF2A6NFQ2 919 aa18.77■□□□□ 0.59
HOXA9-201ENST00000343483 FCHO1O14526 889 aa18.77■□□□□ 0.59
HOXA9-201ENST00000343483 PRKCGP05129 697 aa18.77■□□□□ 0.59
HOXA9-201ENST00000343483 C2P06681 752 aa18.77■□□□□ 0.59
HOXA9-201ENST00000343483 KITP10721 976 aa18.77■□□□□ 0.59
HOXA9-201ENST00000343483 USP10Q14694 798 aaKnown RBP18.77■□□□□ 0.59
HOXA9-201ENST00000343483 PCLAFQ15004 111 aa18.77■□□□□ 0.59
HOXA9-201ENST00000343483 DBN1Q16643 649 aa18.77■□□□□ 0.59
HOXA9-201ENST00000343483 BBS5Q8N3I7 341 aa18.77■□□□□ 0.59
HOXA9-201ENST00000343483 FAM13CQ8NE31 585 aa18.77■□□□□ 0.59
HOXA9-201ENST00000343483 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.77■□□□□ 0.59
HOXA9-201ENST00000343483 UBA2Q9UBT2 640 aaPredicted RBP18.77■□□□□ 0.59
HOXA9-201ENST00000343483 MARCOQ9UEW3 520 aaPredicted RBP18.77■□□□□ 0.59
HOXA9-201ENST00000343483 CARNS1A5YM72 827 aa18.76■□□□□ 0.59
HOXA9-201ENST00000343483 CCDC22O60826 627 aa18.76■□□□□ 0.59
HOXA9-201ENST00000343483 BAIAP3O94812 1187 aa18.76■□□□□ 0.59
HOXA9-201ENST00000343483 ATXN1LP0C7T5 689 aaKnown RBP18.76■□□□□ 0.59
HOXA9-201ENST00000343483 HADHAP40939 763 aa18.76■□□□□ 0.59
HOXA9-201ENST00000343483 KRT72Q14CN4 511 aa18.76■□□□□ 0.59
HOXA9-201ENST00000343483 TSTD2Q5T7W7 516 aa18.76■□□□□ 0.59
HOXA9-201ENST00000343483 MBLAC2Q68D91 279 aa18.76■□□□□ 0.59
HOXA9-201ENST00000343483 TXNDC8Q6A555 127 aa18.76■□□□□ 0.59
HOXA9-201ENST00000343483 TTC7BQ86TV6 843 aa18.76■□□□□ 0.59
HOXA9-201ENST00000343483 ITIH5Q86UX2 942 aa18.76■□□□□ 0.59
HOXA9-201ENST00000343483 ALYREFQ86V81 257 aaKnown RBP18.76■□□□□ 0.59
HOXA9-201ENST00000343483 FAM167BQ9BTA0 163 aa18.76■□□□□ 0.59
HOXA9-201ENST00000343483 CINPQ9BW66 212 aaPredicted RBP18.76■□□□□ 0.59
HOXA9-201ENST00000343483 C20orf27Q9GZN8 174 aa18.76■□□□□ 0.59
HOXA9-201ENST00000343483 THAP1Q9NVV9 213 aa18.76■□□□□ 0.59
HOXA9-201ENST00000343483 TLK1Q9UKI8 766 aa18.76■□□□□ 0.59
HOXA9-201ENST00000343483 LOC285095A0A1B0GVY8 99 aa18.75■□□□□ 0.59
HOXA9-201ENST00000343483 CBX4O00257 560 aa18.75■□□□□ 0.59
HOXA9-201ENST00000343483 CNPP09543 421 aaKnown RBP18.75■□□□□ 0.59
HOXA9-201ENST00000343483 AVPR1AP37288 418 aa18.75■□□□□ 0.59
HOXA9-201ENST00000343483 PGGT1BP53609 377 aa18.75■□□□□ 0.59
HOXA9-201ENST00000343483 CCDC153Q494R4 210 aa18.75■□□□□ 0.59
HOXA9-201ENST00000343483 NEPROQ6NW34 567 aa18.75■□□□□ 0.59
HOXA9-201ENST00000343483 CHST9Q7L1S5 443 aa18.75■□□□□ 0.59
HOXA9-201ENST00000343483 SLC41A1Q8IVJ1 513 aa18.75■□□□□ 0.59
HOXA9-201ENST00000343483 HERC6Q8IVU3 1022 aa18.75■□□□□ 0.59
HOXA9-201ENST00000343483 C10orf107Q8IVU9 208 aa18.75■□□□□ 0.59
HOXA9-201ENST00000343483 ARL14EPQ8N8R7 260 aaPredicted RBP18.75■□□□□ 0.59
HOXA9-201ENST00000343483 ZFRQ96KR1 1074 aaKnown RBP18.75■□□□□ 0.59
HOXA9-201ENST00000343483 RANBP9Q96S59 729 aa18.75■□□□□ 0.59
HOXA9-201ENST00000343483 DDX50Q9BQ39 737 aaKnown RBP18.75■□□□□ 0.59
HOXA9-201ENST00000343483 NMUR2Q9GZQ4 415 aa18.75■□□□□ 0.59
HOXA9-201ENST00000343483 WWP1Q9H0M0 922 aa18.75■□□□□ 0.59
HOXA9-201ENST00000343483 MUC3BQ9H195 1237 aa18.75■□□□□ 0.59
HOXA9-201ENST00000343483 TLE6Q9H808 572 aa18.75■□□□□ 0.59
HOXA9-201ENST00000343483 COPG2Q9UBF2 871 aa18.75■□□□□ 0.59
HOXA9-201ENST00000343483 SEPT3Q9UH03 358 aa18.75■□□□□ 0.59
HOXA9-201ENST00000343483 ILVBLA1L0T0 632 aa18.75■□□□□ 0.59
HOXA9-201ENST00000343483 PHGDHO43175 533 aaKnown RBP18.75■□□□□ 0.59
HOXA9-201ENST00000343483 KDELR3O43731 214 aa18.75■□□□□ 0.59
HOXA9-201ENST00000343483 CSPG5O95196 566 aa18.75■□□□□ 0.59
HOXA9-201ENST00000343483 F11P03951 625 aa18.75■□□□□ 0.59
HOXA9-201ENST00000343483 SERPINF2P08697 491 aa18.75■□□□□ 0.59
HOXA9-201ENST00000343483 FGF3P11487 239 aaPredicted RBP18.75■□□□□ 0.59
HOXA9-201ENST00000343483 AQP5P55064 265 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms