RNA–Protein interactions for RNA: ENST00000342294.4

TRA2B-202, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best) BASIC

Gene TRA2B, Length 288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-202ENST00000342294 PEX5P50542 639 aa17.12■□□□□ 0.33
TRA2B-202ENST00000342294 ALG11Q2TAA5 492 aa17.12■□□□□ 0.33
TRA2B-202ENST00000342294 CCNJLQ8IV13 435 aa17.12■□□□□ 0.33
TRA2B-202ENST00000342294 SLITRK4Q8IW52 837 aa17.12■□□□□ 0.33
TRA2B-202ENST00000342294 ZNF397Q8NF99 534 aaPredicted RBP17.12■□□□□ 0.33
TRA2B-202ENST00000342294 GPR156Q8NFN8 814 aa17.12■□□□□ 0.33
TRA2B-202ENST00000342294 SNX21Q969T3 373 aa17.12■□□□□ 0.33
TRA2B-202ENST00000342294 NT5C3BQ969T7 300 aa17.12■□□□□ 0.33
TRA2B-202ENST00000342294 ARHGEF26Q96DR7 871 aa17.12■□□□□ 0.33
TRA2B-202ENST00000342294 TM6SF2Q9BZW4 377 aa17.12■□□□□ 0.33
TRA2B-202ENST00000342294 ATP13A1Q9HD20 1204 aa17.12■□□□□ 0.33
TRA2B-202ENST00000342294 TUBD1Q9UJT1 453 aa17.12■□□□□ 0.33
TRA2B-202ENST00000342294 MMP20O60882 483 aa17.11■□□□□ 0.33
TRA2B-202ENST00000342294 ERBB2P04626 1255 aa17.11■□□□□ 0.33
TRA2B-202ENST00000342294 BORAQ6PGQ7 559 aa17.11■□□□□ 0.33
TRA2B-202ENST00000342294 OGFOD3Q6PK18 319 aa17.11■□□□□ 0.33
TRA2B-202ENST00000342294 LRRC31Q6UY01 552 aa17.11■□□□□ 0.33
TRA2B-202ENST00000342294 TMPRSS9Q7Z410 1059 aa17.11■□□□□ 0.33
TRA2B-202ENST00000342294 HID1Q8IV36 788 aa17.11■□□□□ 0.33
TRA2B-202ENST00000342294 OR6K2Q8NGY2 324 aa17.11■□□□□ 0.33
TRA2B-202ENST00000342294 TSACCQ96A04 125 aaPredicted RBP17.11■□□□□ 0.33
TRA2B-202ENST00000342294 PGAP3Q96FM1 320 aaPredicted RBP17.11■□□□□ 0.33
TRA2B-202ENST00000342294 GSDMAQ96QA5 445 aa17.11■□□□□ 0.33
TRA2B-202ENST00000342294 CMKLR1Q99788 373 aa17.11■□□□□ 0.33
TRA2B-202ENST00000342294 GTPBP4Q9BZE4 634 aaKnown RBP17.11■□□□□ 0.33
TRA2B-202ENST00000342294 INTS2Q9H0H0 1204 aaKnown RBP17.11■□□□□ 0.33
TRA2B-202ENST00000342294 UBE2TQ9NPD8 197 aaPredicted RBP17.11■□□□□ 0.33
TRA2B-202ENST00000342294 TMPRSS4Q9NRS4 437 aa17.11■□□□□ 0.33
TRA2B-202ENST00000342294 RRN3Q9NYV6 651 aa17.11■□□□□ 0.33
TRA2B-202ENST00000342294 UNC79Q9P2D8 2635 aa17.11■□□□□ 0.33
TRA2B-202ENST00000342294 MYO9AB2RTY4 2548 aa17.1■□□□□ 0.33
TRA2B-202ENST00000342294 RELNP78509 3460 aa17.1■□□□□ 0.33
TRA2B-202ENST00000342294 TMEM110-MUSTN1A8MSY1 372 aa17.1■□□□□ 0.33
TRA2B-202ENST00000342294 BECN2A8MW95 431 aa17.1■□□□□ 0.33
TRA2B-202ENST00000342294 TM7SF2O76062 418 aa17.1■□□□□ 0.33
TRA2B-202ENST00000342294 CTSEP14091 401 aa17.1■□□□□ 0.33
TRA2B-202ENST00000342294 PNLIPP16233 465 aa17.1■□□□□ 0.33
TRA2B-202ENST00000342294 GLB1P16278 677 aa17.1■□□□□ 0.33
TRA2B-202ENST00000342294 MAPK10P53779 464 aa17.1■□□□□ 0.33
TRA2B-202ENST00000342294 SLC6A3Q01959 620 aa17.1■□□□□ 0.33
TRA2B-202ENST00000342294 GNA12Q03113 381 aa17.1■□□□□ 0.33
TRA2B-202ENST00000342294 KCNAB2Q13303 367 aa17.1■□□□□ 0.33
TRA2B-202ENST00000342294 CCDC40Q4G0X9 1142 aa17.1■□□□□ 0.33
TRA2B-202ENST00000342294 CERCAMQ5T4B2 595 aa17.1■□□□□ 0.33
TRA2B-202ENST00000342294 ACBD5Q5T8D3 534 aaPredicted RBP17.1■□□□□ 0.33
TRA2B-202ENST00000342294 NYAP1Q6ZVC0 841 aa17.1■□□□□ 0.33
TRA2B-202ENST00000342294 GKN2Q86XP6 184 aa17.1■□□□□ 0.33
TRA2B-202ENST00000342294 Q8N9G6 341 aaPredicted RBP17.1■□□□□ 0.33
TRA2B-202ENST00000342294 SPATA20Q8TB22 786 aa17.1■□□□□ 0.33
TRA2B-202ENST00000342294 EPAS1Q99814 870 aa17.1■□□□□ 0.33
TRA2B-202ENST00000342294 C1QTNF7Q9BXJ2 289 aa17.1■□□□□ 0.33
TRA2B-202ENST00000342294 PCDHGC3Q9UN70 934 aa17.1■□□□□ 0.33
TRA2B-202ENST00000342294 RNF215Q9Y6U7 377 aa17.1■□□□□ 0.33
TRA2B-202ENST00000342294 UNC13CQ8NB66 2214 aa17.09■□□□□ 0.33
TRA2B-202ENST00000342294 AGRPO00253 132 aa17.09■□□□□ 0.33
TRA2B-202ENST00000342294 RASGRP1O95267 797 aa17.09■□□□□ 0.33
TRA2B-202ENST00000342294 UGT2B4P06133 528 aa17.09■□□□□ 0.33
TRA2B-202ENST00000342294 POLE2P56282 527 aa17.09■□□□□ 0.33
TRA2B-202ENST00000342294 KRT85P78386 507 aa17.09■□□□□ 0.33
TRA2B-202ENST00000342294 IRF4Q15306 451 aa17.09■□□□□ 0.33
TRA2B-202ENST00000342294 TCEA2Q15560 299 aa17.09■□□□□ 0.33
TRA2B-202ENST00000342294 KLHL40Q2TBA0 621 aa17.09■□□□□ 0.33
TRA2B-202ENST00000342294 C4orf17Q53FE4 359 aa17.09■□□□□ 0.33
TRA2B-202ENST00000342294 SPRED1Q7Z699 444 aa17.09■□□□□ 0.33
TRA2B-202ENST00000342294 TRIM59Q8IWR1 403 aa17.09■□□□□ 0.33
TRA2B-202ENST00000342294 FAM26EQ8N5C1 309 aa17.09■□□□□ 0.33
TRA2B-202ENST00000342294 OR2AP1Q8NGE2 309 aa17.09■□□□□ 0.33
TRA2B-202ENST00000342294 KLHL32Q96NJ5 620 aa17.09■□□□□ 0.33
TRA2B-202ENST00000342294 ANAPC2Q9UJX6 822 aa17.09■□□□□ 0.33
TRA2B-202ENST00000342294 KRIT1O00522 736 aa17.08■□□□□ 0.32
TRA2B-202ENST00000342294 POP4O95707 220 aaKnown RBP17.08■□□□□ 0.32
TRA2B-202ENST00000342294 GSRP00390 522 aa17.08■□□□□ 0.32
TRA2B-202ENST00000342294 F9P00740 461 aa17.08■□□□□ 0.32
TRA2B-202ENST00000342294 ITIH2P19823 946 aa17.08■□□□□ 0.32
TRA2B-202ENST00000342294 ACVRL1P37023 503 aa17.08■□□□□ 0.32
TRA2B-202ENST00000342294 ARSDP51689 593 aa17.08■□□□□ 0.32
TRA2B-202ENST00000342294 SRP54P61011 504 aaKnown RBP17.08■□□□□ 0.32
TRA2B-202ENST00000342294 NFATC4Q14934 902 aa17.08■□□□□ 0.32
TRA2B-202ENST00000342294 C16orf72Q14CZ0 275 aa17.08■□□□□ 0.32
TRA2B-202ENST00000342294 WSCD2Q2TBF2 565 aa17.08■□□□□ 0.32
TRA2B-202ENST00000342294 MYLK3Q32MK0 819 aa17.08■□□□□ 0.32
TRA2B-202ENST00000342294 PTPN20Q4JDL3 420 aa17.08■□□□□ 0.32
TRA2B-202ENST00000342294 LRRC73Q5JTD7 316 aa17.08■□□□□ 0.32
TRA2B-202ENST00000342294 KCTD16Q68DU8 428 aa17.08■□□□□ 0.32
TRA2B-202ENST00000342294 ENOSF1Q7L5Y1 443 aa17.08■□□□□ 0.32
TRA2B-202ENST00000342294 TTC7BQ86TV6 843 aa17.08■□□□□ 0.32
TRA2B-202ENST00000342294 PASD1Q8IV76 773 aa17.08■□□□□ 0.32
TRA2B-202ENST00000342294 RYBPQ8N488 228 aaPredicted RBP17.08■□□□□ 0.32
TRA2B-202ENST00000342294 NKD1Q969G9 470 aa17.08■□□□□ 0.32
TRA2B-202ENST00000342294 RBM15Q96T37 977 aaKnown RBP eCLIP17.08■□□□□ 0.326e-26■■■■■ 34.7
TRA2B-202ENST00000342294 OSBPL1AQ9BXW6 950 aa17.08■□□□□ 0.32
TRA2B-202ENST00000342294 SEMA6CQ9H3T2 930 aa17.08■□□□□ 0.32
TRA2B-202ENST00000342294 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.08■□□□□ 0.32
TRA2B-202ENST00000342294 STMND1H3BQB6 276 aa17.07■□□□□ 0.32
TRA2B-202ENST00000342294 SRGAP2O75044 1071 aa17.07■□□□□ 0.32
TRA2B-202ENST00000342294 CCL4P13236 92 aa17.07■□□□□ 0.32
TRA2B-202ENST00000342294 SULT1E1P49888 294 aa17.07■□□□□ 0.32
TRA2B-202ENST00000342294 DEUP1Q05D60 604 aa17.07■□□□□ 0.32
TRA2B-202ENST00000342294 TMEM164Q5U3C3 297 aa17.07■□□□□ 0.32
TRA2B-202ENST00000342294 TTI2Q6NXR4 508 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms