RNA–Protein interactions for RNA: ENST00000342075.8

PMS1-201, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 3,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-201ENST00000342075 HDXQ7Z353 690 aa14.03□□□□□ -0.16
PMS1-201ENST00000342075 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.03□□□□□ -0.16
PMS1-201ENST00000342075 TERB1Q8NA31 727 aa14.03□□□□□ -0.16
PMS1-201ENST00000342075 SLC25A13Q9UJS0 675 aa14.03□□□□□ -0.16
PMS1-201ENST00000342075 MUC22E2RYF6 1773 aaPredicted RBP14.03□□□□□ -0.16
PMS1-201ENST00000342075 COL4A2P08572 1712 aa14.03□□□□□ -0.16
PMS1-201ENST00000342075 GOLGA8CPA6NN73 597 aa14.03□□□□□ -0.16
PMS1-201ENST00000342075 A8MX80 341 aa14.03□□□□□ -0.16
PMS1-201ENST00000342075 AURKAO14965 403 aa14.03□□□□□ -0.16
PMS1-201ENST00000342075 SERPINF2P08697 491 aa14.03□□□□□ -0.16
PMS1-201ENST00000342075 SLC12A1Q13621 1099 aa14.03□□□□□ -0.16
PMS1-201ENST00000342075 RFTN1Q14699 578 aaPredicted RBP14.03□□□□□ -0.16
PMS1-201ENST00000342075 SLMAPQ14BN4 828 aa14.03□□□□□ -0.16
PMS1-201ENST00000342075 SLC1A5Q15758 541 aa14.03□□□□□ -0.16
PMS1-201ENST00000342075 SKIDA1Q1XH10 827 aa14.03□□□□□ -0.16
PMS1-201ENST00000342075 KLHDC8BQ8IXV7 354 aa14.03□□□□□ -0.16
PMS1-201ENST00000342075 MREGQ8N565 214 aa14.03□□□□□ -0.16
PMS1-201ENST00000342075 EPS8L3Q8TE67 593 aaKnown RBP14.03□□□□□ -0.16
PMS1-201ENST00000342075 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.03□□□□□ -0.16
PMS1-201ENST00000342075 TTC17Q96AE7 1141 aa14.03□□□□□ -0.16
PMS1-201ENST00000342075 E2F7Q96AV8 911 aa14.03□□□□□ -0.16
PMS1-201ENST00000342075 MFSD3Q96ES6 412 aa14.03□□□□□ -0.16
PMS1-201ENST00000342075 NUDCD1Q96RS6 583 aa14.03□□□□□ -0.16
PMS1-201ENST00000342075 ZDHHC6Q9H6R6 413 aa14.03□□□□□ -0.16
PMS1-201ENST00000342075 POLR3BQ9NW08 1133 aaPredicted RBP14.03□□□□□ -0.16
PMS1-201ENST00000342075 CTNNAL1Q9UBT7 734 aa14.03□□□□□ -0.16
PMS1-201ENST00000342075 SLC2A6Q9UGQ3 507 aa14.03□□□□□ -0.16
PMS1-201ENST00000342075 KCTD3Q9Y597 815 aa14.03□□□□□ -0.16
PMS1-201ENST00000342075 RAI2Q9Y5P3 530 aa14.03□□□□□ -0.16
PMS1-201ENST00000342075 NFS1Q9Y697 457 aa14.03□□□□□ -0.16
PMS1-201ENST00000342075 DMDP11532 3685 aa14.03□□□□□ -0.16
PMS1-201ENST00000342075 GOLGA8KD6RF30 607 aa14.02□□□□□ -0.16
PMS1-201ENST00000342075 GOLGA8TH3BQL2 631 aa14.02□□□□□ -0.16
PMS1-201ENST00000342075 KAT7O95251 611 aa14.02□□□□□ -0.16
PMS1-201ENST00000342075 GALK1P51570 392 aa14.02□□□□□ -0.16
PMS1-201ENST00000342075 MPP3Q13368 585 aa14.02□□□□□ -0.16
PMS1-201ENST00000342075 EGFLAMQ63HQ2 1017 aa14.02□□□□□ -0.16
PMS1-201ENST00000342075 NCEH1Q6PIU2 408 aa14.02□□□□□ -0.16
PMS1-201ENST00000342075 UNC5AQ6ZN44 842 aa14.02□□□□□ -0.16
PMS1-201ENST00000342075 BBS5Q8N3I7 341 aa14.02□□□□□ -0.16
PMS1-201ENST00000342075 LPCAT1Q8NF37 534 aa14.02□□□□□ -0.16
PMS1-201ENST00000342075 FRS2Q8WU20 508 aa14.02□□□□□ -0.16
PMS1-201ENST00000342075 FCRL3Q96P31 734 aaPredicted RBP14.02□□□□□ -0.16
PMS1-201ENST00000342075 TDRD1Q9BXT4 1180 aaKnown RBP14.02□□□□□ -0.16
PMS1-201ENST00000342075 SLC2A11Q9BYW1 496 aa14.02□□□□□ -0.16
PMS1-201ENST00000342075 CACNA2D2Q9NY47 1150 aa14.02□□□□□ -0.16
PMS1-201ENST00000342075 HECAQ9UBI9 543 aaPredicted RBP14.02□□□□□ -0.16
PMS1-201ENST00000342075 ZC3H7BQ9UGR2 993 aaKnown RBP14.02□□□□□ -0.16
PMS1-201ENST00000342075 SLC27A6Q9Y2P4 619 aa14.02□□□□□ -0.16
PMS1-201ENST00000342075 CPP00450 1065 aa14.02□□□□□ -0.17
PMS1-201ENST00000342075 DLDP09622 509 aaKnown RBP14.02□□□□□ -0.17
PMS1-201ENST00000342075 CTPS1P17812 591 aa14.02□□□□□ -0.17
PMS1-201ENST00000342075 CCNHP51946 323 aaPredicted RBP14.02□□□□□ -0.17
PMS1-201ENST00000342075 SEPT6Q14141 434 aa14.02□□□□□ -0.17
PMS1-201ENST00000342075 LONRF1Q17RB8 773 aa14.02□□□□□ -0.17
PMS1-201ENST00000342075 C3orf62Q6ZUJ4 267 aa14.02□□□□□ -0.17
PMS1-201ENST00000342075 SRLQ86TD4 932 aa14.02□□□□□ -0.17
PMS1-201ENST00000342075 IQCKQ8N0W5 287 aa14.02□□□□□ -0.17
PMS1-201ENST00000342075 OR2A12Q8NGT7 310 aa14.02□□□□□ -0.17
PMS1-201ENST00000342075 TRIB3Q96RU7 358 aa14.02□□□□□ -0.17
PMS1-201ENST00000342075 XAB2Q9HCS7 855 aaKnown RBP14.02□□□□□ -0.17
PMS1-201ENST00000342075 PCDHB9Q9Y5E1 797 aa14.02□□□□□ -0.17
PMS1-201ENST00000342075 CTSLP07711 333 aa14.01□□□□□ -0.17
PMS1-201ENST00000342075 ALPIP09923 528 aa14.01□□□□□ -0.17
PMS1-201ENST00000342075 CDK18Q07002 472 aa14.01□□□□□ -0.17
PMS1-201ENST00000342075 CFAP58Q5T655 872 aa14.01□□□□□ -0.17
PMS1-201ENST00000342075 NAPEPLDQ6IQ20 393 aa14.01□□□□□ -0.17
PMS1-201ENST00000342075 OR2AP1Q8NGE2 309 aa14.01□□□□□ -0.17
PMS1-201ENST00000342075 FAM129AQ9BZQ8 928 aa14.01□□□□□ -0.17
PMS1-201ENST00000342075 SPO11Q9Y5K1 396 aa14.01□□□□□ -0.17
PMS1-201ENST00000342075 NMBRP28336 390 aa14.01□□□□□ -0.17
PMS1-201ENST00000342075 CDH17Q12864 832 aa14.01□□□□□ -0.17
PMS1-201ENST00000342075 ZNF234Q14588 700 aa14.01□□□□□ -0.17
PMS1-201ENST00000342075 PON2Q15165 354 aa14.01□□□□□ -0.17
PMS1-201ENST00000342075 BLOC1S5Q8TDH9 187 aa14.01□□□□□ -0.17
PMS1-201ENST00000342075 PTPRN2Q92932 1015 aa14.01□□□□□ -0.17
PMS1-201ENST00000342075 IFT43Q96FT9 208 aa14.01□□□□□ -0.17
PMS1-201ENST00000342075 EBNA1BP2Q99848 306 aaKnown RBP14.01□□□□□ -0.17
PMS1-201ENST00000342075 ARL5AQ9Y689 179 aa14.01□□□□□ -0.17
PMS1-201ENST00000342075 LOC285095A0A1B0GVY8 99 aa14.01□□□□□ -0.17
PMS1-201ENST00000342075 SDR42E2A6NKP2 422 aa14.01□□□□□ -0.17
PMS1-201ENST00000342075 UGT1A9O60656 530 aa14.01□□□□□ -0.17
PMS1-201ENST00000342075 PRKCHP24723 683 aa14.01□□□□□ -0.17
PMS1-201ENST00000342075 IL12RB1P42701 662 aa14.01□□□□□ -0.17
PMS1-201ENST00000342075 CDK16Q00536 496 aa14.01□□□□□ -0.17
PMS1-201ENST00000342075 ZNF844Q08AG5 666 aa14.01□□□□□ -0.17
PMS1-201ENST00000342075 NR1H3Q13133 447 aa14.01□□□□□ -0.17
PMS1-201ENST00000342075 MSLNQ13421 630 aaPredicted RBP14.01□□□□□ -0.17
PMS1-201ENST00000342075 FNDC3BQ53EP0 1204 aaKnown RBP14.01□□□□□ -0.17
PMS1-201ENST00000342075 PALM2Q8IXS6 379 aa14.01□□□□□ -0.17
PMS1-201ENST00000342075 MAFAQ8NHW3 353 aaPredicted RBP14.01□□□□□ -0.17
PMS1-201ENST00000342075 CSGALNACT1Q8TDX6 532 aa14.01□□□□□ -0.17
PMS1-201ENST00000342075 FBF1Q8TES7 1133 aa14.01□□□□□ -0.17
PMS1-201ENST00000342075 RMDN1Q96DB5 314 aa14.01□□□□□ -0.17
PMS1-201ENST00000342075 STAMBPL1Q96FJ0 436 aa14.01□□□□□ -0.17
PMS1-201ENST00000342075 UGT1A7Q9HAW7 530 aa14.01□□□□□ -0.17
PMS1-201ENST00000342075 UGT1A10Q9HAW8 530 aa14.01□□□□□ -0.17
PMS1-201ENST00000342075 UGT1A8Q9HAW9 530 aa14.01□□□□□ -0.17
PMS1-201ENST00000342075 SMYD2Q9NRG4 433 aa14.01□□□□□ -0.17
PMS1-201ENST00000342075 PIAS3Q9Y6X2 628 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms