RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 TPD52L3Q96J77 140 aa14.95□□□□□ -0.02
RRP1B-201ENST00000340648 ABCB10Q9NRK6 738 aa14.95□□□□□ -0.02
RRP1B-201ENST00000340648 CATSPERZQ9NTU4 200 aa14.95□□□□□ -0.02
RRP1B-201ENST00000340648 MDM4O15151 490 aa14.94□□□□□ -0.02
RRP1B-201ENST00000340648 ZBTB11O95625 1053 aaPredicted RBP14.94□□□□□ -0.02
RRP1B-201ENST00000340648 TOP3BO95985 862 aaKnown RBP14.94□□□□□ -0.02
RRP1B-201ENST00000340648 SERPIND1P05546 499 aa14.94□□□□□ -0.02
RRP1B-201ENST00000340648 F7P08709 466 aaPredicted RBP14.94□□□□□ -0.02
RRP1B-201ENST00000340648 DLDP09622 509 aaKnown RBP14.94□□□□□ -0.02
RRP1B-201ENST00000340648 NNMTP40261 264 aa14.94□□□□□ -0.02
RRP1B-201ENST00000340648 CPT1AP50416 773 aa14.94□□□□□ -0.02
RRP1B-201ENST00000340648 ATXN1P54253 815 aaKnown RBP14.94□□□□□ -0.02
RRP1B-201ENST00000340648 MAXP61244 160 aa14.94□□□□□ -0.02
RRP1B-201ENST00000340648 TIGD2Q4W5G0 525 aa14.94□□□□□ -0.02
RRP1B-201ENST00000340648 SFT2D3Q587I9 215 aa14.94□□□□□ -0.02
RRP1B-201ENST00000340648 PPM1LQ5SGD2 360 aa14.94□□□□□ -0.02
RRP1B-201ENST00000340648 OVOS1Q6IE37 1185 aa14.94□□□□□ -0.02
RRP1B-201ENST00000340648 ARHGAP36Q6ZRI8 547 aa14.94□□□□□ -0.02
RRP1B-201ENST00000340648 GLT6D1Q7Z4J2 308 aa14.94□□□□□ -0.02
RRP1B-201ENST00000340648 CLYBLQ8N0X4 340 aa14.94□□□□□ -0.02
RRP1B-201ENST00000340648 ZNF567Q8N184 647 aa14.94□□□□□ -0.02
RRP1B-201ENST00000340648 MTERF3Q96E29 417 aa14.94□□□□□ -0.02
RRP1B-201ENST00000340648 FOPNLQ96NB1 174 aa14.94□□□□□ -0.02
RRP1B-201ENST00000340648 LMCD1Q9NZU5 365 aa14.94□□□□□ -0.02
RRP1B-201ENST00000340648 CCR3P51677 355 aa14.94□□□□□ -0.02
RRP1B-201ENST00000340648 TMEM198Q66K66 360 aa14.94□□□□□ -0.02
RRP1B-201ENST00000340648 OTOP3Q7RTS5 596 aa14.94□□□□□ -0.02
RRP1B-201ENST00000340648 ADHFE1Q8IWW8 467 aa14.94□□□□□ -0.02
RRP1B-201ENST00000340648 SKA1Q96BD8 255 aa14.94□□□□□ -0.02
RRP1B-201ENST00000340648 LZTS3O60299 673 aaPredicted RBP14.94□□□□□ -0.02
RRP1B-201ENST00000340648 MPP1Q00013 466 aa14.94□□□□□ -0.02
RRP1B-201ENST00000340648 LDLRAP1Q5SW96 308 aa14.94□□□□□ -0.02
RRP1B-201ENST00000340648 FAM45BPQ6NSW5 357 aa14.94□□□□□ -0.02
RRP1B-201ENST00000340648 SLC39A4Q6P5W5 647 aa14.94□□□□□ -0.02
RRP1B-201ENST00000340648 STRADAQ7RTN6 431 aa14.94□□□□□ -0.02
RRP1B-201ENST00000340648 FAM45AQ8TCE6 357 aa14.94□□□□□ -0.02
RRP1B-201ENST00000340648 H3BNX3 289 aa14.94□□□□□ -0.02
RRP1B-201ENST00000340648 ADCYAP1R1P41586 468 aa14.94□□□□□ -0.02
RRP1B-201ENST00000340648 THOP1P52888 689 aa14.94□□□□□ -0.02
RRP1B-201ENST00000340648 SFSWAPQ12872 951 aaKnown RBP14.94□□□□□ -0.02
RRP1B-201ENST00000340648 REP15Q6BDI9 236 aa14.94□□□□□ -0.02
RRP1B-201ENST00000340648 CLEC6AQ6EIG7 209 aa14.94□□□□□ -0.02
RRP1B-201ENST00000340648 KLHDC10Q6PID8 442 aa14.94□□□□□ -0.02
RRP1B-201ENST00000340648 FRMD7Q6ZUT3 714 aa14.94□□□□□ -0.02
RRP1B-201ENST00000340648 ASRGL1Q7L266 308 aa14.94□□□□□ -0.02
RRP1B-201ENST00000340648 TREML1Q86YW5 311 aa14.94□□□□□ -0.02
RRP1B-201ENST00000340648 CDYL2Q8N8U2 506 aa14.94□□□□□ -0.02
RRP1B-201ENST00000340648 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.94□□□□□ -0.02
RRP1B-201ENST00000340648 CAPSLQ8WWF8 208 aa14.94□□□□□ -0.02
RRP1B-201ENST00000340648 OSBPL6Q9BZF3 934 aa14.94□□□□□ -0.02
RRP1B-201ENST00000340648 ZFYVE28Q9HCC9 887 aa14.94□□□□□ -0.02
RRP1B-201ENST00000340648 PRDM5Q9NQX1 630 aaPredicted RBP14.94□□□□□ -0.02
RRP1B-201ENST00000340648 ARHGEF4Q9NR80 690 aa14.94□□□□□ -0.02
RRP1B-201ENST00000340648 TRNAU1APQ9NX07 287 aaKnown RBP14.94□□□□□ -0.02
RRP1B-201ENST00000340648 SQORQ9Y6N5 450 aa14.94□□□□□ -0.02
RRP1B-201ENST00000340648 LOC100506127A0A0U1RQW1 187 aa14.93□□□□□ -0.02
RRP1B-201ENST00000340648 KCNH1O95259 989 aa14.93□□□□□ -0.02
RRP1B-201ENST00000340648 SEC24AO95486 1093 aa14.93□□□□□ -0.02
RRP1B-201ENST00000340648 PIRTP0C851 137 aa14.93□□□□□ -0.02
RRP1B-201ENST00000340648 TKTP29401 623 aaKnown RBP14.93□□□□□ -0.02
RRP1B-201ENST00000340648 HALP42357 657 aa14.93□□□□□ -0.02
RRP1B-201ENST00000340648 ASPAP45381 313 aa14.93□□□□□ -0.02
RRP1B-201ENST00000340648 SLC18A2Q05940 514 aa14.93□□□□□ -0.02
RRP1B-201ENST00000340648 ZNF460Q14592 562 aa14.93□□□□□ -0.02
RRP1B-201ENST00000340648 PITRM1Q5JRX3 1037 aa14.93□□□□□ -0.02
RRP1B-201ENST00000340648 GJC2Q5T442 439 aaPredicted RBP14.93□□□□□ -0.02
RRP1B-201ENST00000340648 IGDCC3Q8IVU1 814 aa14.93□□□□□ -0.02
RRP1B-201ENST00000340648 BBS7Q8IWZ6 715 aa14.93□□□□□ -0.02
RRP1B-201ENST00000340648 OFCC1Q8IZS5 231 aa14.93□□□□□ -0.02
RRP1B-201ENST00000340648 PSMA8Q8TAA3 256 aa14.93□□□□□ -0.02
RRP1B-201ENST00000340648 UNC93B1Q9H1C4 597 aa14.93□□□□□ -0.02
RRP1B-201ENST00000340648 TDRKHQ9Y2W6 561 aaKnown RBP14.93□□□□□ -0.02
RRP1B-201ENST00000340648 MYH6P13533 1939 aa14.93□□□□□ -0.02
RRP1B-201ENST00000340648 XRCC1P18887 633 aaPredicted RBP14.93□□□□□ -0.02
RRP1B-201ENST00000340648 ITGALP20701 1170 aa14.93□□□□□ -0.02
RRP1B-201ENST00000340648 THPOP40225 353 aa14.93□□□□□ -0.02
RRP1B-201ENST00000340648 ZNF135P52742 658 aaPredicted RBP14.93□□□□□ -0.02
RRP1B-201ENST00000340648 EPS8Q12929 822 aa14.93□□□□□ -0.02
RRP1B-201ENST00000340648 TCEAL1Q15170 157 aa14.93□□□□□ -0.02
RRP1B-201ENST00000340648 RELL1Q8IUW5 271 aa14.93□□□□□ -0.02
RRP1B-201ENST00000340648 KLHL23Q8NBE8 558 aa14.93□□□□□ -0.02
RRP1B-201ENST00000340648 PLEKHA8Q96JA3 519 aa14.93□□□□□ -0.02
RRP1B-201ENST00000340648 KLF11O14901 512 aa14.93□□□□□ -0.02
RRP1B-201ENST00000340648 RAD51BO15315 384 aa14.93□□□□□ -0.02
RRP1B-201ENST00000340648 KRT6AP02538 564 aa14.93□□□□□ -0.02
RRP1B-201ENST00000340648 KRT6BP04259 564 aa14.93□□□□□ -0.02
RRP1B-201ENST00000340648 KRT6CP48668 564 aa14.93□□□□□ -0.02
RRP1B-201ENST00000340648 IRF9Q00978 393 aa14.93□□□□□ -0.02
RRP1B-201ENST00000340648 KLF1Q13351 362 aaPredicted RBP14.93□□□□□ -0.02
RRP1B-201ENST00000340648 SPIDRQ14159 915 aa14.93□□□□□ -0.02
RRP1B-201ENST00000340648 HSDL1Q3SXM5 330 aa14.93□□□□□ -0.02
RRP1B-201ENST00000340648 NECAB2Q7Z6G3 386 aa14.93□□□□□ -0.02
RRP1B-201ENST00000340648 SENP6Q9GZR1 1112 aaPredicted RBP14.93□□□□□ -0.02
RRP1B-201ENST00000340648 PCDHAC1Q9H158 963 aa14.93□□□□□ -0.02
RRP1B-201ENST00000340648 CACNA2D2Q9NY47 1150 aa14.93□□□□□ -0.02
RRP1B-201ENST00000340648 RGPD2P0DJD1 1756 aa14.93□□□□□ -0.02
RRP1B-201ENST00000340648 F8W810 466 aa14.93□□□□□ -0.02
RRP1B-201ENST00000340648 CST1P01037 141 aa14.93□□□□□ -0.02
RRP1B-201ENST00000340648 RHOCP08134 193 aa14.93□□□□□ -0.02
RRP1B-201ENST00000340648 MAD2L1Q13257 205 aaPredicted RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 600 ms