RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 PIH1D3Q9NQM4 214 aaKnown RBP3.32□□□□□ -1.88
CSMD3-202ENST00000339701 KLHL8Q9P2G9 620 aaPredicted RBP3.32□□□□□ -1.88
CSMD3-202ENST00000339701 PFDN2Q9UHV9 154 aa3.32□□□□□ -1.88
CSMD3-202ENST00000339701 A0A1W2PQ72 361 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 PER2O15055 1255 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 ZBTB11O95625 1053 aaPredicted RBP3.31□□□□□ -1.88
CSMD3-202ENST00000339701 AGR2O95994 175 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 AMPD1P23109 780 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 TM4SF1P30408 202 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 GCLMP48507 274 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 EIF2B2P49770 351 aaKnown RBP3.31□□□□□ -1.88
CSMD3-202ENST00000339701 SLC18A1P54219 525 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 CASP7P55210 303 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 BDH1Q02338 343 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 ATP1A4Q13733 1029 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 RASGRP2Q7LDG7 609 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 PAGE2Q7Z2X7 111 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 ADGRG6Q86SQ4 1221 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 POC5Q8NA72 575 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 MDM1Q8TC05 714 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 GRIN3AQ8TCU5 1115 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 MYDGFQ969H8 173 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 KCTD15Q96SI1 283 aaPredicted RBP3.31□□□□□ -1.88
CSMD3-202ENST00000339701 SERHL2Q9H4I8 314 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 CYP3A43Q9HB55 503 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 RXFP1Q9HBX9 757 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 PCDH18Q9HCL0 1135 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 SERHLQ9NQF3 203 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 COMMD8Q9NX08 183 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 RGS17Q9UGC6 210 aaPredicted RBP3.31□□□□□ -1.88
CSMD3-202ENST00000339701 PLAGL2Q9UPG8 496 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 STMND1H3BQB6 276 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 APOL1O14791 398 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 PLA2G6O60733 806 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 WFS1O76024 890 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 RB1P06400 928 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 GSPT1P15170 499 aaKnown RBP3.31□□□□□ -1.88
CSMD3-202ENST00000339701 TNFRSF8P28908 595 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 GTF2E2P29084 291 aaKnown RBP3.31□□□□□ -1.88
CSMD3-202ENST00000339701 CRABP2P29373 138 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 RPL5P46777 297 aaKnown RBP3.31□□□□□ -1.88
CSMD3-202ENST00000339701 ID4P47928 161 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 C11orf63Q6NUN7 778 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 ERICH5Q6P6B1 374 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 UBE2Q1Q7Z7E8 422 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 SCUBE3Q8IX30 993 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 MPP5Q8N3R9 675 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 SFRP1Q8N474 314 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 PHOSPHO2Q8TCD6 241 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 TOP1MTQ969P6 601 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 FAM111AQ96PZ2 611 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 C8orf33Q9H7E9 229 aaPredicted RBP3.31□□□□□ -1.88
CSMD3-202ENST00000339701 LRRC4CQ9HCJ2 640 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 SLC2A4RGQ9NR83 387 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 C1orf109Q9NX04 203 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 PPARGC1AQ9UBK2 798 aaKnown RBP3.31□□□□□ -1.88
CSMD3-202ENST00000339701 CPNE7Q9UBL6 633 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 TRHDEQ9UKU6 1024 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 CFL2Q9Y281 166 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 PRELID3BQ9Y3B1 194 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 ZFP37Q9Y6Q3 630 aaPredicted RBP3.31□□□□□ -1.88
CSMD3-202ENST00000339701 SVILO95425 2214 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 CNTNAP1P78357 1384 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 CXorf51AA0A1B0GTR3 108 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 ZBTB5O15062 677 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 LATO43561 262 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 DFNA5O60443 496 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 CCNT2O60583 730 aaKnown RBP3.31□□□□□ -1.88
CSMD3-202ENST00000339701 SERPIND1P05546 499 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 RPL4P36578 427 aaKnown RBP3.31□□□□□ -1.88
CSMD3-202ENST00000339701 SULT2A1Q06520 285 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 TOB2Q14106 344 aaPredicted RBP3.31□□□□□ -1.88
CSMD3-202ENST00000339701 ZCCHC7Q8N3Z6 543 aaKnown RBP3.31□□□□□ -1.88
CSMD3-202ENST00000339701 HM13Q8TCT9 377 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 SPATA17Q96L03 361 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 TUBGCP5Q96RT8 1024 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 ADGRE3Q9BY15 652 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 DUS2Q9NX74 493 aaKnown RBP3.31□□□□□ -1.88
CSMD3-202ENST00000339701 TLR7Q9NYK1 1049 aaKnown RBP3.31□□□□□ -1.88
CSMD3-202ENST00000339701 FTSJ1Q9UET6 329 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 AP5Z1O43299 807 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 ATG12O94817 140 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 CRTAMO95727 393 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 MMP1P03956 469 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 CDK4P11802 303 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 MLNP12872 115 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 ALOX15P16050 662 aaPredicted RBP3.31□□□□□ -1.88
CSMD3-202ENST00000339701 CORO7P57737 925 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 NFIL3Q16649 462 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 FAM187BQ17R55 369 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 XKR3Q5GH77 459 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 TTC39BQ5VTQ0 682 aaPredicted RBP3.31□□□□□ -1.88
CSMD3-202ENST00000339701 DARS2Q6PI48 645 aaKnown RBP3.31□□□□□ -1.88
CSMD3-202ENST00000339701 BAIAP2L2Q6UXY1 529 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 CCDC103Q8IW40 242 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 CREB3L1Q96BA8 519 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 NXNL1Q96CM4 212 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 ITCHQ96J02 903 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 SERPINB11Q96P15 392 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 HDHD5Q9BXW7 423 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms