RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 SLC39A10Q9ULF5 831 aa22.64■■□□□ 1.21
PDLIM2-203ENST00000339162 TRAV19A0A0A6YYK7 116 aa22.63■■□□□ 1.21
PDLIM2-203ENST00000339162 LUC7L3O95232 432 aaKnown RBP22.63■■□□□ 1.21
PDLIM2-203ENST00000339162 SLC1A2P43004 574 aa22.63■■□□□ 1.21
PDLIM2-203ENST00000339162 THOC5Q13769 683 aaKnown RBP22.63■■□□□ 1.21
PDLIM2-203ENST00000339162 PTPRCAPQ14761 206 aa22.63■■□□□ 1.21
PDLIM2-203ENST00000339162 ZNF470Q6ECI4 717 aa22.63■■□□□ 1.21
PDLIM2-203ENST00000339162 ZC3HC1Q86WB0 502 aaKnown RBP22.63■■□□□ 1.21
PDLIM2-203ENST00000339162 PLD6Q8N2A8 252 aaKnown RBP22.63■■□□□ 1.21
PDLIM2-203ENST00000339162 FEM1AQ9BSK4 669 aa22.63■■□□□ 1.21
PDLIM2-203ENST00000339162 LSM7Q9UK45 103 aaKnown RBP22.63■■□□□ 1.21
PDLIM2-203ENST00000339162 CLEC4EQ9ULY5 219 aa22.63■■□□□ 1.21
PDLIM2-203ENST00000339162 CCL26Q9Y258 94 aa22.63■■□□□ 1.21
PDLIM2-203ENST00000339162 CHKBQ9Y259 395 aa22.63■■□□□ 1.21
PDLIM2-203ENST00000339162 STARD13Q9Y3M8 1113 aa22.63■■□□□ 1.21
PDLIM2-203ENST00000339162 GRM6O15303 877 aa22.63■■□□□ 1.21
PDLIM2-203ENST00000339162 LATS1O95835 1130 aa22.63■■□□□ 1.21
PDLIM2-203ENST00000339162 PAMP19021 973 aa22.63■■□□□ 1.21
PDLIM2-203ENST00000339162 CSKP41240 450 aa22.63■■□□□ 1.21
PDLIM2-203ENST00000339162 CSE1LP55060 971 aaKnown RBP22.63■■□□□ 1.21
PDLIM2-203ENST00000339162 IRF9Q00978 393 aa22.63■■□□□ 1.21
PDLIM2-203ENST00000339162 CAMK1Q14012 370 aa22.63■■□□□ 1.21
PDLIM2-203ENST00000339162 TSTD2Q5T7W7 516 aa22.63■■□□□ 1.21
PDLIM2-203ENST00000339162 CCDC121Q6ZUS5 278 aa22.63■■□□□ 1.21
PDLIM2-203ENST00000339162 OR13J1Q8NGT2 312 aa22.63■■□□□ 1.21
PDLIM2-203ENST00000339162 GCNAQ96QF7 691 aa22.63■■□□□ 1.21
PDLIM2-203ENST00000339162 PRKD2Q9BZL6 878 aa22.63■■□□□ 1.21
PDLIM2-203ENST00000339162 ABCF3Q9NUQ8 709 aa22.63■■□□□ 1.21
PDLIM2-203ENST00000339162 TYW5A2RUC4 315 aaKnown RBP22.62■■□□□ 1.21
PDLIM2-203ENST00000339162 GFRA2O00451 464 aa22.62■■□□□ 1.21
PDLIM2-203ENST00000339162 AURKAO14965 403 aa22.62■■□□□ 1.21
PDLIM2-203ENST00000339162 CDC25CP30307 473 aa22.62■■□□□ 1.21
PDLIM2-203ENST00000339162 SERPINB8P50452 374 aa22.62■■□□□ 1.21
PDLIM2-203ENST00000339162 SLC7A9P82251 487 aa22.62■■□□□ 1.21
PDLIM2-203ENST00000339162 TMPRSS15P98073 1019 aa22.62■■□□□ 1.21
PDLIM2-203ENST00000339162 CES4AQ5XG92 561 aa22.62■■□□□ 1.21
PDLIM2-203ENST00000339162 ALG1LQ6GMV1 187 aa22.62■■□□□ 1.21
PDLIM2-203ENST00000339162 FAM109BQ6ICB4 259 aaPredicted RBP22.62■■□□□ 1.21
PDLIM2-203ENST00000339162 KIAA0930Q6ICG6 404 aaPredicted RBP22.62■■□□□ 1.21
PDLIM2-203ENST00000339162 TDRD5Q8NAT2 981 aaKnown RBP22.62■■□□□ 1.21
PDLIM2-203ENST00000339162 RMDN2Q96LZ7 410 aa22.62■■□□□ 1.21
PDLIM2-203ENST00000339162 SMIM14Q96QK8 99 aa22.62■■□□□ 1.21
PDLIM2-203ENST00000339162 MAN1C1Q9NR34 630 aa22.62■■□□□ 1.21
PDLIM2-203ENST00000339162 TMEM216Q9P0N5 145 aa22.62■■□□□ 1.21
PDLIM2-203ENST00000339162 LZTS1Q9Y250 596 aa22.62■■□□□ 1.21
PDLIM2-203ENST00000339162 ARL5AQ9Y689 179 aa22.62■■□□□ 1.21
PDLIM2-203ENST00000339162 CCT8L1PA6NM43 557 aa22.62■■□□□ 1.21
PDLIM2-203ENST00000339162 TIMM44O43615 452 aa22.62■■□□□ 1.21
PDLIM2-203ENST00000339162 GLRA3O75311 464 aa22.62■■□□□ 1.21
PDLIM2-203ENST00000339162 ARSDP51689 593 aa22.62■■□□□ 1.21
PDLIM2-203ENST00000339162 ZNF697Q5TEC3 545 aa22.62■■□□□ 1.21
PDLIM2-203ENST00000339162 NUDCD3Q8IVD9 361 aa22.62■■□□□ 1.21
PDLIM2-203ENST00000339162 MFN1Q8IWA4 741 aa22.62■■□□□ 1.21
PDLIM2-203ENST00000339162 PHOSPHO2Q8TCD6 241 aa22.62■■□□□ 1.21
PDLIM2-203ENST00000339162 GRAMD1AQ96CP6 724 aa22.62■■□□□ 1.21
PDLIM2-203ENST00000339162 FEM1CQ96JP0 617 aa22.62■■□□□ 1.21
PDLIM2-203ENST00000339162 ARL2BPQ9Y2Y0 163 aa22.62■■□□□ 1.21
PDLIM2-203ENST00000339162 PCDHGC4Q9Y5F7 938 aa22.62■■□□□ 1.21
PDLIM2-203ENST00000339162 A0A096LPK6 155 aa22.61■■□□□ 1.21
PDLIM2-203ENST00000339162 LEFTY2O00292 366 aa22.61■■□□□ 1.21
PDLIM2-203ENST00000339162 PER2O15055 1255 aa22.61■■□□□ 1.21
PDLIM2-203ENST00000339162 INSIG1O15503 277 aa22.61■■□□□ 1.21
PDLIM2-203ENST00000339162 TMCC1O94876 653 aa22.61■■□□□ 1.21
PDLIM2-203ENST00000339162 MT-CO1P00395 513 aa22.61■■□□□ 1.21
PDLIM2-203ENST00000339162 EPCAMP16422 314 aa22.61■■□□□ 1.21
PDLIM2-203ENST00000339162 AVPR1AP37288 418 aa22.61■■□□□ 1.21
PDLIM2-203ENST00000339162 NEPROQ6NW34 567 aa22.61■■□□□ 1.21
PDLIM2-203ENST00000339162 ZCCHC23Q6ZST2 131 aa22.61■■□□□ 1.21
PDLIM2-203ENST00000339162 HTR3DQ70Z44 454 aa22.61■■□□□ 1.21
PDLIM2-203ENST00000339162 PTAR1Q7Z6K3 402 aaPredicted RBP22.61■■□□□ 1.21
PDLIM2-203ENST00000339162 CNTN4Q8IWV2 1026 aa22.61■■□□□ 1.21
PDLIM2-203ENST00000339162 APCDD1Q8J025 514 aa22.61■■□□□ 1.21
PDLIM2-203ENST00000339162 SHKBP1Q8TBC3 707 aa22.61■■□□□ 1.21
PDLIM2-203ENST00000339162 CCT6BQ92526 530 aa22.61■■□□□ 1.21
PDLIM2-203ENST00000339162 TSSK1BQ9BXA7 367 aa22.61■■□□□ 1.21
PDLIM2-203ENST00000339162 RHOJQ9H4E5 214 aa22.61■■□□□ 1.21
PDLIM2-203ENST00000339162 ZNF395Q9H8N7 513 aaPredicted RBP22.61■■□□□ 1.21
PDLIM2-203ENST00000339162 NPHS2Q9NP85 383 aa22.61■■□□□ 1.21
PDLIM2-203ENST00000339162 SCUBE2Q9NQ36 999 aa22.61■■□□□ 1.21
PDLIM2-203ENST00000339162 DCDC2Q9UHG0 476 aa22.61■■□□□ 1.21
PDLIM2-203ENST00000339162 OR51F1A6NGY5 319 aa22.61■■□□□ 1.21
PDLIM2-203ENST00000339162 LDB2O43679 373 aa22.61■■□□□ 1.21
PDLIM2-203ENST00000339162 ZMPSTE24O75844 475 aa22.61■■□□□ 1.21
PDLIM2-203ENST00000339162 HAUS5O94927 633 aa22.61■■□□□ 1.21
PDLIM2-203ENST00000339162 GSRP00390 522 aa22.61■■□□□ 1.21
PDLIM2-203ENST00000339162 C2P06681 752 aa22.61■■□□□ 1.21
PDLIM2-203ENST00000339162 CR2P20023 1033 aa22.61■■□□□ 1.21
PDLIM2-203ENST00000339162 MAGEA12P43365 314 aa22.61■■□□□ 1.21
PDLIM2-203ENST00000339162 CHI3L2Q15782 390 aa22.61■■□□□ 1.21
PDLIM2-203ENST00000339162 GPR158Q5T848 1215 aa22.61■■□□□ 1.21
PDLIM2-203ENST00000339162 SPNS2Q8IVW8 549 aa22.61■■□□□ 1.21
PDLIM2-203ENST00000339162 MFSD6LQ8IWD5 586 aa22.61■■□□□ 1.21
PDLIM2-203ENST00000339162 RANBP9Q96S59 729 aa22.61■■□□□ 1.21
PDLIM2-203ENST00000339162 SUDS3Q9H7L9 328 aaPredicted RBP22.61■■□□□ 1.21
PDLIM2-203ENST00000339162 NSMCE4AQ9NXX6 385 aa22.61■■□□□ 1.21
PDLIM2-203ENST00000339162 FCF1Q9Y324 198 aaKnown RBP22.61■■□□□ 1.21
PDLIM2-203ENST00000339162 DENND4CQ5VZ89 1909 aa22.6■■□□□ 1.21
PDLIM2-203ENST00000339162 MROH6A6NGR9 719 aa22.6■■□□□ 1.21
PDLIM2-203ENST00000339162 PHGDHO43175 533 aaKnown RBP22.6■■□□□ 1.21
PDLIM2-203ENST00000339162 PDHA1P08559 390 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms