RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 PDCL3Q9H2J4 239 aa11.65□□□□□ -0.54
CSMD2-202ENST00000338325 SIX2Q9NPC8 291 aa11.65□□□□□ -0.54
CSMD2-202ENST00000338325 GULP1Q9UBP9 304 aa11.65□□□□□ -0.54
CSMD2-202ENST00000338325 DOLKQ9UPQ8 538 aa11.65□□□□□ -0.54
CSMD2-202ENST00000338325 HECTD1Q9ULT8 2610 aa11.65□□□□□ -0.54
CSMD2-202ENST00000338325 D6RAR5 112 aa11.65□□□□□ -0.55
CSMD2-202ENST00000338325 TMX2-CTNND1H3BSU7 103 aa11.65□□□□□ -0.55
CSMD2-202ENST00000338325 FOXN3O00409 490 aaPredicted RBP11.65□□□□□ -0.55
CSMD2-202ENST00000338325 TM7SF2O76062 418 aa11.65□□□□□ -0.55
CSMD2-202ENST00000338325 GJB6O95452 261 aa11.65□□□□□ -0.55
CSMD2-202ENST00000338325 POP4O95707 220 aaKnown RBP11.65□□□□□ -0.55
CSMD2-202ENST00000338325 CELA2BP08218 269 aaPredicted RBP11.65□□□□□ -0.55
CSMD2-202ENST00000338325 EIF4A3P38919 411 aaKnown RBP11.65□□□□□ -0.55
CSMD2-202ENST00000338325 BLKP51451 505 aa11.65□□□□□ -0.55
CSMD2-202ENST00000338325 INHBCP55103 352 aa11.65□□□□□ -0.55
CSMD2-202ENST00000338325 BPIFB4P59827 614 aa11.65□□□□□ -0.55
CSMD2-202ENST00000338325 ELOCQ15369 112 aa11.65□□□□□ -0.55
CSMD2-202ENST00000338325 LINC00303Q3SY05 128 aa11.65□□□□□ -0.55
CSMD2-202ENST00000338325 LRRC73Q5JTD7 316 aa11.65□□□□□ -0.55
CSMD2-202ENST00000338325 TRNP1Q6NT89 227 aa11.65□□□□□ -0.55
CSMD2-202ENST00000338325 USP53Q70EK8 1073 aa11.65□□□□□ -0.55
CSMD2-202ENST00000338325 TP53I13Q8NBR0 393 aaPredicted RBP11.65□□□□□ -0.55
CSMD2-202ENST00000338325 PCDH19Q8TAB3 1148 aa11.65□□□□□ -0.55
CSMD2-202ENST00000338325 CXorf40AQ8TE69 158 aa11.65□□□□□ -0.55
CSMD2-202ENST00000338325 SCG3Q8WXD2 468 aaKnown RBP11.65□□□□□ -0.55
CSMD2-202ENST00000338325 VOPP1Q96AW1 172 aa11.65□□□□□ -0.55
CSMD2-202ENST00000338325 SGF29Q96ES7 293 aa11.65□□□□□ -0.55
CSMD2-202ENST00000338325 CFAP57Q96MR6 1250 aa11.65□□□□□ -0.55
CSMD2-202ENST00000338325 EPAS1Q99814 870 aa11.65□□□□□ -0.55
CSMD2-202ENST00000338325 MBNL1Q9NR56 388 aaKnown RBP11.65□□□□□ -0.55
CSMD2-202ENST00000338325 RABGEF1Q9UJ41 708 aa11.65□□□□□ -0.55
CSMD2-202ENST00000338325 DNAJC12Q9UKB3 198 aa11.65□□□□□ -0.55
CSMD2-202ENST00000338325 ACSL6Q9UKU0 697 aa11.65□□□□□ -0.55
CSMD2-202ENST00000338325 NAV2Q8IVL1 2488 aa11.65□□□□□ -0.55
CSMD2-202ENST00000338325 BOD1L1Q8NFC6 3051 aa11.64□□□□□ -0.55
CSMD2-202ENST00000338325 GOLGA8SH3BPF8 625 aa11.64□□□□□ -0.55
CSMD2-202ENST00000338325 NOBOXO60393 691 aa11.64□□□□□ -0.55
CSMD2-202ENST00000338325 MMP20O60882 483 aa11.64□□□□□ -0.55
CSMD2-202ENST00000338325 ITGB2P05107 769 aa11.64□□□□□ -0.55
CSMD2-202ENST00000338325 ALPIP09923 528 aa11.64□□□□□ -0.55
CSMD2-202ENST00000338325 MAPKAPK2P49137 400 aa11.64□□□□□ -0.55
CSMD2-202ENST00000338325 MYLK3Q32MK0 819 aa11.64□□□□□ -0.55
CSMD2-202ENST00000338325 MANEALQ5VSG8 457 aa11.64□□□□□ -0.55
CSMD2-202ENST00000338325 LVRNQ6Q4G3 990 aa11.64□□□□□ -0.55
CSMD2-202ENST00000338325 GDPD4Q6W3E5 623 aa11.64□□□□□ -0.55
CSMD2-202ENST00000338325 FAM71AQ8IYT1 594 aa11.64□□□□□ -0.55
CSMD2-202ENST00000338325 SDR16C5Q8N3Y7 309 aa11.64□□□□□ -0.55
CSMD2-202ENST00000338325 TMEM74Q96NL1 305 aa11.64□□□□□ -0.55
CSMD2-202ENST00000338325 ARHGAP9Q9BRR9 750 aa11.64□□□□□ -0.55
CSMD2-202ENST00000338325 CPEB1Q9BZB8 566 aaKnown RBP11.64□□□□□ -0.55
CSMD2-202ENST00000338325 TRIM4Q9C037 500 aa11.64□□□□□ -0.55
CSMD2-202ENST00000338325 RETREG1Q9H6L5 497 aa11.64□□□□□ -0.55
CSMD2-202ENST00000338325 NDFIP2Q9NV92 336 aa11.64□□□□□ -0.55
CSMD2-202ENST00000338325 SIRPGQ9P1W8 387 aa11.64□□□□□ -0.55
CSMD2-202ENST00000338325 IL17BQ9UHF5 180 aa11.64□□□□□ -0.55
CSMD2-202ENST00000338325 RWDD2AQ9UIY3 292 aa11.64□□□□□ -0.55
CSMD2-202ENST00000338325 HPCAL4Q9UM19 191 aa11.64□□□□□ -0.55
CSMD2-202ENST00000338325 A0A1W2PQM1 296 aa11.63□□□□□ -0.55
CSMD2-202ENST00000338325 FAM170AA1A519 330 aa11.63□□□□□ -0.55
CSMD2-202ENST00000338325 RPLP0P05388 317 aaKnown RBP11.63□□□□□ -0.55
CSMD2-202ENST00000338325 JMJD7P0C870 316 aa11.63□□□□□ -0.55
CSMD2-202ENST00000338325 LIPCP11150 499 aa11.63□□□□□ -0.55
CSMD2-202ENST00000338325 CTSEP14091 401 aa11.63□□□□□ -0.55
CSMD2-202ENST00000338325 HGFP14210 728 aa11.63□□□□□ -0.55
CSMD2-202ENST00000338325 RHOQP17081 205 aa11.63□□□□□ -0.55
CSMD2-202ENST00000338325 CCKBRP32239 447 aa11.63□□□□□ -0.55
CSMD2-202ENST00000338325 PEX5P50542 639 aa11.63□□□□□ -0.55
CSMD2-202ENST00000338325 HK3P52790 923 aa11.63□□□□□ -0.55
CSMD2-202ENST00000338325 CCL7P80098 99 aa11.63□□□□□ -0.55
CSMD2-202ENST00000338325 NRG1Q02297 640 aaPredicted RBP11.63□□□□□ -0.55
CSMD2-202ENST00000338325 IRF4Q15306 451 aa11.63□□□□□ -0.55
CSMD2-202ENST00000338325 TGIF1Q15583 401 aa11.63□□□□□ -0.55
CSMD2-202ENST00000338325 KLHL40Q2TBA0 621 aa11.63□□□□□ -0.55
CSMD2-202ENST00000338325 ATXN7L2Q5T6C5 722 aaPredicted RBP11.63□□□□□ -0.55
CSMD2-202ENST00000338325 RWDD4Q6NW29 188 aaKnown RBP11.63□□□□□ -0.55
CSMD2-202ENST00000338325 ARCQ7LC44 396 aa11.63□□□□□ -0.55
CSMD2-202ENST00000338325 TTC7BQ86TV6 843 aa11.63□□□□□ -0.55
CSMD2-202ENST00000338325 NLRP14Q86W24 1093 aa11.63□□□□□ -0.55
CSMD2-202ENST00000338325 GKN2Q86XP6 184 aa11.63□□□□□ -0.55
CSMD2-202ENST00000338325 HID1Q8IV36 788 aa11.63□□□□□ -0.55
CSMD2-202ENST00000338325 MSANTD4Q8NCY6 345 aa11.63□□□□□ -0.55
CSMD2-202ENST00000338325 OR6C4Q8NGE1 309 aa11.63□□□□□ -0.55
CSMD2-202ENST00000338325 EXTL1Q92935 676 aa11.63□□□□□ -0.55
CSMD2-202ENST00000338325 GDAP1L1Q96MZ0 367 aa11.63□□□□□ -0.55
CSMD2-202ENST00000338325 WRAP53Q9BUR4 548 aaKnown RBP11.63□□□□□ -0.55
CSMD2-202ENST00000338325 EDEM3Q9BZQ6 932 aa11.63□□□□□ -0.55
CSMD2-202ENST00000338325 FOXP3Q9BZS1 431 aa11.63□□□□□ -0.55
CSMD2-202ENST00000338325 MAGEH1Q9H213 219 aa11.63□□□□□ -0.55
CSMD2-202ENST00000338325 STARD5Q9NSY2 213 aa11.63□□□□□ -0.55
CSMD2-202ENST00000338325 TMEM248Q9NWD8 314 aa11.63□□□□□ -0.55
CSMD2-202ENST00000338325 OR12D3Q9UGF7 316 aa11.63□□□□□ -0.55
CSMD2-202ENST00000338325 DNAI1Q9UI46 699 aa11.63□□□□□ -0.55
CSMD2-202ENST00000338325 TMEM59LQ9UK28 342 aa11.63□□□□□ -0.55
CSMD2-202ENST00000338325 GPR34Q9UPC5 381 aa11.63□□□□□ -0.55
CSMD2-202ENST00000338325 UBR5O95071 2799 aaPredicted RBP11.63□□□□□ -0.55
CSMD2-202ENST00000338325 BSNQ9UPA5 3926 aa11.62□□□□□ -0.55
CSMD2-202ENST00000338325 UNC13CQ8NB66 2214 aa11.62□□□□□ -0.55
CSMD2-202ENST00000338325 TMEM110-MUSTN1A8MSY1 372 aa11.62□□□□□ -0.55
CSMD2-202ENST00000338325 TERTO14746 1132 aaKnown RBP11.62□□□□□ -0.55
CSMD2-202ENST00000338325 RAMP2O60895 175 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms