RNA–Protein interactions for RNA: ENST00000336128.11

ZNF548-201, Transcript of zinc finger protein 548, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ZNF548, Length 2,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-201ENST00000336128 NOD2Q9HC29 1040 aa12.56□□□□□ -0.4
ZNF548-201ENST00000336128 IRAK3Q9Y616 596 aa12.56□□□□□ -0.4
ZNF548-201ENST00000336128 A0A096LPK6 155 aa12.56□□□□□ -0.4
ZNF548-201ENST00000336128 MYO1CO00159 1063 aa12.56□□□□□ -0.4
ZNF548-201ENST00000336128 SNAP91O60641 907 aa12.56□□□□□ -0.4
ZNF548-201ENST00000336128 PLIN3O60664 434 aa12.56□□□□□ -0.4
ZNF548-201ENST00000336128 PAPSS2O95340 614 aaPredicted RBP12.56□□□□□ -0.4
ZNF548-201ENST00000336128 PROCP04070 461 aa12.56□□□□□ -0.4
ZNF548-201ENST00000336128 PRKCGP05129 697 aa12.56□□□□□ -0.4
ZNF548-201ENST00000336128 CR2P20023 1033 aa12.56□□□□□ -0.4
ZNF548-201ENST00000336128 DNAJB1P25685 340 aa12.56□□□□□ -0.4
ZNF548-201ENST00000336128 MZF1P28698 734 aaPredicted RBP12.56□□□□□ -0.4
ZNF548-201ENST00000336128 HADHAP40939 763 aa12.56□□□□□ -0.4
ZNF548-201ENST00000336128 OVGP1Q12889 678 aa12.56□□□□□ -0.4
ZNF548-201ENST00000336128 CTBP1Q13363 440 aa12.56□□□□□ -0.4
ZNF548-201ENST00000336128 DLG2Q15700 870 aa12.56□□□□□ -0.4
ZNF548-201ENST00000336128 CHI3L2Q15782 390 aa12.56□□□□□ -0.4
ZNF548-201ENST00000336128 FSCBQ5H9T9 825 aa12.56□□□□□ -0.4
ZNF548-201ENST00000336128 PPM1LQ5SGD2 360 aa12.56□□□□□ -0.4
ZNF548-201ENST00000336128 ZNF470Q6ECI4 717 aa12.56□□□□□ -0.4
ZNF548-201ENST00000336128 NEPROQ6NW34 567 aa12.56□□□□□ -0.4
ZNF548-201ENST00000336128 NUDCD3Q8IVD9 361 aa12.56□□□□□ -0.4
ZNF548-201ENST00000336128 MRPL43Q8N983 215 aaKnown RBP12.56□□□□□ -0.4
ZNF548-201ENST00000336128 C2CD4AQ8NCU7 369 aaPredicted RBP12.56□□□□□ -0.4
ZNF548-201ENST00000336128 PHOSPHO2Q8TCD6 241 aa12.56□□□□□ -0.4
ZNF548-201ENST00000336128 C10orf82Q8WW14 230 aa12.56□□□□□ -0.4
ZNF548-201ENST00000336128 E2F7Q96AV8 911 aa12.56□□□□□ -0.4
ZNF548-201ENST00000336128 EXOC2Q96KP1 924 aa12.56□□□□□ -0.4
ZNF548-201ENST00000336128 NSMCE3Q96MG7 304 aa12.56□□□□□ -0.4
ZNF548-201ENST00000336128 SCUBE2Q9NQ36 999 aa12.56□□□□□ -0.4
ZNF548-201ENST00000336128 ASAH2Q9NR71 780 aa12.56□□□□□ -0.4
ZNF548-201ENST00000336128 SLC39A10Q9ULF5 831 aa12.56□□□□□ -0.4
ZNF548-201ENST00000336128 SH3BP1Q9Y3L3 701 aa12.56□□□□□ -0.4
ZNF548-201ENST00000336128 DENND4CQ5VZ89 1909 aa12.56□□□□□ -0.4
ZNF548-201ENST00000336128 MROH6A6NGR9 719 aa12.55□□□□□ -0.4
ZNF548-201ENST00000336128 ZMPSTE24O75844 475 aa12.55□□□□□ -0.4
ZNF548-201ENST00000336128 NDST3O95803 873 aa12.55□□□□□ -0.4
ZNF548-201ENST00000336128 IL1BP01584 269 aa12.55□□□□□ -0.4
ZNF548-201ENST00000336128 EPOP01588 193 aa12.55□□□□□ -0.4
ZNF548-201ENST00000336128 AHSGP02765 367 aa12.55□□□□□ -0.4
ZNF548-201ENST00000336128 GSTA1P08263 222 aa12.55□□□□□ -0.4
ZNF548-201ENST00000336128 TROVE2P10155 538 aaKnown RBP eCLIP12.55□□□□□ -0.4
ZNF548-201ENST00000336128 TMPRSS15P98073 1019 aa12.55□□□□□ -0.4
ZNF548-201ENST00000336128 DBN1Q16643 649 aa12.55□□□□□ -0.4
ZNF548-201ENST00000336128 LINGO4Q6UY18 593 aa12.55□□□□□ -0.4
ZNF548-201ENST00000336128 NLRP9Q7RTR0 991 aa12.55□□□□□ -0.4
ZNF548-201ENST00000336128 CLEC14AQ86T13 490 aa12.55□□□□□ -0.4
ZNF548-201ENST00000336128 RNF135Q8IUD6 432 aa12.55□□□□□ -0.4
ZNF548-201ENST00000336128 OR13J1Q8NGT2 312 aa12.55□□□□□ -0.4
ZNF548-201ENST00000336128 RAB3IL1Q8TBN0 382 aa12.55□□□□□ -0.4
ZNF548-201ENST00000336128 SPPL3Q8TCT6 385 aa12.55□□□□□ -0.4
ZNF548-201ENST00000336128 WFDC5Q8TCV5 224 aa12.55□□□□□ -0.4
ZNF548-201ENST00000336128 POF1BQ8WVV4 589 aa12.55□□□□□ -0.4
ZNF548-201ENST00000336128 TRIB3Q96RU7 358 aa12.55□□□□□ -0.4
ZNF548-201ENST00000336128 NPHS2Q9NP85 383 aa12.55□□□□□ -0.4
ZNF548-201ENST00000336128 TMEM216Q9P0N5 145 aa12.55□□□□□ -0.4
ZNF548-201ENST00000336128 FBXO5Q9UKT4 447 aa12.55□□□□□ -0.4
ZNF548-201ENST00000336128 INSIG1O15503 277 aa12.55□□□□□ -0.4
ZNF548-201ENST00000336128 LDB2O43679 373 aa12.55□□□□□ -0.4
ZNF548-201ENST00000336128 TMCC1O94876 653 aa12.55□□□□□ -0.4
ZNF548-201ENST00000336128 CD160O95971 181 aa12.55□□□□□ -0.4
ZNF548-201ENST00000336128 GSRP00390 522 aa12.55□□□□□ -0.4
ZNF548-201ENST00000336128 C2P06681 752 aa12.55□□□□□ -0.4
ZNF548-201ENST00000336128 SYN1P17600 705 aa12.55□□□□□ -0.4
ZNF548-201ENST00000336128 CSKP41240 450 aa12.55□□□□□ -0.4
ZNF548-201ENST00000336128 CSRP3P50461 194 aa12.55□□□□□ -0.4
ZNF548-201ENST00000336128 SCNN1BP51168 640 aa12.55□□□□□ -0.4
ZNF548-201ENST00000336128 CLCN4P51793 760 aa12.55□□□□□ -0.4
ZNF548-201ENST00000336128 IRF9Q00978 393 aa12.55□□□□□ -0.4
ZNF548-201ENST00000336128 BST1Q10588 318 aa12.55□□□□□ -0.4
ZNF548-201ENST00000336128 CDH18Q13634 790 aa12.55□□□□□ -0.4
ZNF548-201ENST00000336128 FASTKD1Q53R41 847 aaKnown RBP12.55□□□□□ -0.4
ZNF548-201ENST00000336128 CES4AQ5XG92 561 aa12.55□□□□□ -0.4
ZNF548-201ENST00000336128 ATG16L1Q676U5 607 aa12.55□□□□□ -0.4
ZNF548-201ENST00000336128 HTR3DQ70Z44 454 aa12.55□□□□□ -0.4
ZNF548-201ENST00000336128 SLC41A1Q8IVJ1 513 aa12.55□□□□□ -0.4
ZNF548-201ENST00000336128 BBS7Q8IWZ6 715 aa12.55□□□□□ -0.4
ZNF548-201ENST00000336128 PLD6Q8N2A8 252 aaKnown RBP12.55□□□□□ -0.4
ZNF548-201ENST00000336128 CPXM2Q8N436 756 aa12.55□□□□□ -0.4
ZNF548-201ENST00000336128 TDRD5Q8NAT2 981 aaKnown RBP12.55□□□□□ -0.4
ZNF548-201ENST00000336128 BLOC1S5Q8TDH9 187 aa12.55□□□□□ -0.4
ZNF548-201ENST00000336128 NUDCD1Q96RS6 583 aa12.55□□□□□ -0.4
ZNF548-201ENST00000336128 C17orf80Q9BSJ5 609 aa12.55□□□□□ -0.4
ZNF548-201ENST00000336128 ACTR5Q9H9F9 607 aaPredicted RBP12.55□□□□□ -0.4
ZNF548-201ENST00000336128 TLR9Q9NR96 1032 aa12.55□□□□□ -0.4
ZNF548-201ENST00000336128 ZNF358Q9NW07 568 aa12.55□□□□□ -0.4
ZNF548-201ENST00000336128 HCFC1R1Q9NWW0 138 aa12.55□□□□□ -0.4
ZNF548-201ENST00000336128 VPS28Q9UK41 221 aa12.55□□□□□ -0.4
ZNF548-201ENST00000336128 ZNF510Q9Y2H8 683 aa12.55□□□□□ -0.4
ZNF548-201ENST00000336128 KCTD3Q9Y597 815 aa12.55□□□□□ -0.4
ZNF548-201ENST00000336128 OR51B4Q9Y5P0 310 aa12.55□□□□□ -0.4
ZNF548-201ENST00000336128 USH1CQ9Y6N9 552 aa12.55□□□□□ -0.4
ZNF548-201ENST00000336128 FAM95CA0A1B0GW59 222 aa12.54□□□□□ -0.4
ZNF548-201ENST00000336128 LINC01553A4QN01 128 aa12.54□□□□□ -0.4
ZNF548-201ENST00000336128 LEFTY2O00292 366 aa12.54□□□□□ -0.4
ZNF548-201ENST00000336128 PFKLP17858 780 aa12.54□□□□□ -0.4
ZNF548-201ENST00000336128 ALDH3A1P30838 453 aa12.54□□□□□ -0.4
ZNF548-201ENST00000336128 CD151P48509 253 aa12.54□□□□□ -0.4
ZNF548-201ENST00000336128 USP10Q14694 798 aaKnown RBP12.54□□□□□ -0.4
ZNF548-201ENST00000336128 MFSD6LQ8IWD5 586 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms