RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 ATP1A3P13637 1013 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 ANPEPP15144 967 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 GTF2E2P29084 291 aaKnown RBP6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 HOXD12P35452 270 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 GSTM5P46439 218 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 HSPA14Q0VDF9 509 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 SEC23BQ15437 767 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 FBXO43Q4G163 708 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 CLEC12AQ5QGZ9 265 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 LCN1P1Q5VSP4 162 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 DSG4Q86SJ6 1040 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 LAS2Q8IYD9 372 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 SYTL1Q8IYJ3 562 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 RAB2BQ8WUD1 216 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 BARD1Q99728 777 aaKnown RBP6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 ESRP2Q9H6T0 727 aaKnown RBP6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 CLK4Q9HAZ1 481 aaKnown RBP6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 SLC9A2Q9UBY0 812 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 PCDHGA2Q9Y5H1 932 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 EPN1Q9Y6I3 576 aaPredicted RBP6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 CDH10Q9Y6N8 788 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 NCANO14594 1321 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 PDE4DIPQ5VU43 2346 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 IGF2BP3O00425 579 aaKnown RBP eCLIP6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 LCMT2O60294 686 aaKnown RBP6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 GSTT2P0CG29 244 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 CERS1P27544 350 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 TLE4Q04727 773 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 PDZD11Q5EBL8 140 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 GTF2IRD2BQ6EKJ0 949 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 PDXDC2PQ6P474 469 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 ZNF804AQ7Z570 1209 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 GTF2IRD2Q86UP8 949 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 ANKMY2Q8IV38 441 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 ANKRD44Q8N8A2 993 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 PIWIL2Q8TC59 973 aaKnown RBP6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 PANK1Q8TE04 598 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 HTATIP2Q9BUP3 242 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 TIPINQ9BVW5 301 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 RNPEPL1Q9HAU8 725 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 MRPL15Q9P015 296 aaKnown RBP6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 ITIH6Q6UXX5 1313 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 ERCC6L2Q5T890 1561 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 WASH4PA8MWX3 477 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 KCNK2O95069 426 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 SNAPINO95295 136 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 HCKP08631 526 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 UMPSP11172 480 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 DBTP11182 482 aaKnown RBP6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 CRKP46108 304 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 TAS2R39P59534 338 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 PLOD1Q02809 727 aaPredicted RBP6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 MVKQ03426 396 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 SLC10A7Q0GE19 358 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 PAK1Q13153 545 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 MAPKAPK3Q16644 382 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 CCDC184Q52MB2 194 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 RASGRP2Q7LDG7 609 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 ERI1Q8IV48 349 aaKnown RBP6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 FANK1Q8TC84 345 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 PPP1R16AQ96I34 528 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 LRCH3Q96II8 777 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 C10orf90Q96M02 699 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 PPM1MQ96MI6 270 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 ALPK1Q96QP1 1244 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 NEMP1O14524 444 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 KHNYNO15037 678 aaKnown RBP6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 PCP11498 1178 aaKnown RBP6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 ARSFP54793 590 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 CDK16Q00536 496 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 THEMIS2Q5TEJ8 643 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 WDR93Q6P2C0 686 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 DCUN1D2Q6PH85 259 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 TRIM65Q6PJ69 517 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 ZNF367Q7RTV3 350 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 SH2D3CQ8N5H7 860 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 DNAJB3Q8WWF6 145 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 ATP13A1Q9HD20 1204 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 KLHL28Q9NXS3 571 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 PTTG3PQ9NZH4 202 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 PLEKHM1Q9Y4G2 1056 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 SHROOM2Q13796 1616 aa6.11□□□□□ -1.43
CDC42BPA-201ENST00000334218 FAM187AA6NFU0 413 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 CHST10O43529 356 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 CYP4B1P13584 511 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 SRP9P49458 86 aaKnown RBP6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 HK3P52790 923 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 PRKAG1P54619 331 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 CTBP2P56545 445 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 NAA20P61599 178 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 CLEC11AQ9Y240 323 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 QDPRP09417 244 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 SLC2A1P11166 492 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 CLEC4GQ6UXB4 293 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 USP49Q70CQ1 688 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 ZNF551Q7Z340 670 aaPredicted RBP6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 C6orf120Q7Z4R8 191 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 EID3Q8N140 333 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 MOCOSQ96EN8 888 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 C11orf84Q9BUA3 381 aaPredicted RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms