RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 TMEM154Q6P9G4 183 aa19.11■□□□□ 0.65
RFTN1-201ENST00000334133 SCML4Q8N228 414 aa19.11■□□□□ 0.65
RFTN1-201ENST00000334133 FAM193BQ96PV7 902 aaPredicted RBP19.11■□□□□ 0.65
RFTN1-201ENST00000334133 DDX50Q9BQ39 737 aaKnown RBP19.11■□□□□ 0.65
RFTN1-201ENST00000334133 ZCWPW1Q9H0M4 648 aa19.11■□□□□ 0.65
RFTN1-201ENST00000334133 BATF3Q9NR55 127 aa19.11■□□□□ 0.65
RFTN1-201ENST00000334133 ANGPTL2Q9UKU9 493 aa19.11■□□□□ 0.65
RFTN1-201ENST00000334133 TARM1B6A8C7 271 aa19.1■□□□□ 0.65
RFTN1-201ENST00000334133 CA12O43570 354 aa19.1■□□□□ 0.65
RFTN1-201ENST00000334133 SLC4A1P02730 911 aa19.1■□□□□ 0.65
RFTN1-201ENST00000334133 ATP5BP06576 529 aaKnown RBP19.1■□□□□ 0.65
RFTN1-201ENST00000334133 UGP2Q16851 508 aa19.1■□□□□ 0.65
RFTN1-201ENST00000334133 MGAT5BQ3V5L5 792 aa19.1■□□□□ 0.65
RFTN1-201ENST00000334133 FSCBQ5H9T9 825 aa19.1■□□□□ 0.65
RFTN1-201ENST00000334133 SH2D4BQ5SQS7 431 aa19.1■□□□□ 0.65
RFTN1-201ENST00000334133 KDELC1Q6UW63 502 aa19.1■□□□□ 0.65
RFTN1-201ENST00000334133 GIPC2Q8TF65 315 aa19.1■□□□□ 0.65
RFTN1-201ENST00000334133 USP13Q92995 863 aaPredicted RBP19.1■□□□□ 0.65
RFTN1-201ENST00000334133 FBXO32Q969P5 355 aa19.1■□□□□ 0.65
RFTN1-201ENST00000334133 UROC1Q96N76 676 aa19.1■□□□□ 0.65
RFTN1-201ENST00000334133 RPRD1AQ96P16 312 aaPredicted RBP19.1■□□□□ 0.65
RFTN1-201ENST00000334133 GPR62Q9BZJ7 368 aa19.1■□□□□ 0.65
RFTN1-201ENST00000334133 TNFRSF12AQ9NP84 129 aa19.1■□□□□ 0.65
RFTN1-201ENST00000334133 NSMCE4AQ9NXX6 385 aa19.1■□□□□ 0.65
RFTN1-201ENST00000334133 UXTQ9UBK9 157 aaPredicted RBP19.1■□□□□ 0.65
RFTN1-201ENST00000334133 POMPQ9Y244 141 aa19.1■□□□□ 0.65
RFTN1-201ENST00000334133 TLR6Q9Y2C9 796 aa19.1■□□□□ 0.65
RFTN1-201ENST00000334133 ANKRD6Q9Y2G4 727 aa19.1■□□□□ 0.65
RFTN1-201ENST00000334133 GLDCP23378 1020 aa19.1■□□□□ 0.65
RFTN1-201ENST00000334133 TAF10Q12962 218 aa19.1■□□□□ 0.65
RFTN1-201ENST00000334133 PIM3Q86V86 326 aa19.1■□□□□ 0.65
RFTN1-201ENST00000334133 COLGALT2Q8IYK4 626 aa19.1■□□□□ 0.65
RFTN1-201ENST00000334133 PGBD5Q8N414 524 aa19.1■□□□□ 0.65
RFTN1-201ENST00000334133 C2CD4AQ8NCU7 369 aaPredicted RBP19.1■□□□□ 0.65
RFTN1-201ENST00000334133 EXT2Q93063 718 aa19.1■□□□□ 0.65
RFTN1-201ENST00000334133 FAM96AQ9H5X1 160 aa19.1■□□□□ 0.65
RFTN1-201ENST00000334133 MARCH4Q9P2E8 410 aaPredicted RBP19.1■□□□□ 0.65
RFTN1-201ENST00000334133 SLC12A8A0AV02 714 aa19.09■□□□□ 0.65
RFTN1-201ENST00000334133 STX16-NPEPL1H3BU86 382 aa19.09■□□□□ 0.65
RFTN1-201ENST00000334133 AP3B1O00203 1094 aa19.09■□□□□ 0.65
RFTN1-201ENST00000334133 UBTFL6P0CB48 400 aaPredicted RBP19.09■□□□□ 0.65
RFTN1-201ENST00000334133 PKNOX1P55347 436 aa19.09■□□□□ 0.65
RFTN1-201ENST00000334133 ZNF33AQ06730 810 aa19.09■□□□□ 0.65
RFTN1-201ENST00000334133 RASIP1Q5U651 963 aa19.09■□□□□ 0.65
RFTN1-201ENST00000334133 ANKRD49Q8WVL7 239 aa19.09■□□□□ 0.65
RFTN1-201ENST00000334133 HDAC10Q969S8 669 aa19.09■□□□□ 0.65
RFTN1-201ENST00000334133 ZYG11BQ9C0D3 744 aa19.09■□□□□ 0.65
RFTN1-201ENST00000334133 DLGAP2Q9P1A6 1054 aa19.09■□□□□ 0.65
RFTN1-201ENST00000334133 ARHGAP26Q9UNA1 814 aa19.09■□□□□ 0.65
RFTN1-201ENST00000334133 ZNF189O75820 626 aaPredicted RBP19.09■□□□□ 0.65
RFTN1-201ENST00000334133 CCDC166P0CW27 439 aa19.09■□□□□ 0.65
RFTN1-201ENST00000334133 SERPINH1P50454 418 aaKnown RBP19.09■□□□□ 0.65
RFTN1-201ENST00000334133 ACLYP53396 1101 aa19.09■□□□□ 0.65
RFTN1-201ENST00000334133 KLC1Q07866 573 aa19.09■□□□□ 0.65
RFTN1-201ENST00000334133 ASPHQ12797 758 aa19.09■□□□□ 0.65
RFTN1-201ENST00000334133 AFMIDQ63HM1 303 aa19.09■□□□□ 0.65
RFTN1-201ENST00000334133 CAPRIN2Q6IMN6 1127 aaKnown RBP19.09■□□□□ 0.65
RFTN1-201ENST00000334133 RSPO2Q6UXX9 243 aaPredicted RBP19.09■□□□□ 0.65
RFTN1-201ENST00000334133 SLC24A5Q71RS6 500 aa19.09■□□□□ 0.65
RFTN1-201ENST00000334133 CNTN4Q8IWV2 1026 aa19.09■□□□□ 0.65
RFTN1-201ENST00000334133 SLC39A13Q96H72 371 aa19.09■□□□□ 0.65
RFTN1-201ENST00000334133 ZNF184Q99676 751 aaPredicted RBP19.09■□□□□ 0.65
RFTN1-201ENST00000334133 UBE2OQ9C0C9 1292 aaKnown RBP19.09■□□□□ 0.65
RFTN1-201ENST00000334133 SLC25A51Q9H1U9 297 aa19.09■□□□□ 0.65
RFTN1-201ENST00000334133 CCSER2Q9H7U1 834 aa19.09■□□□□ 0.65
RFTN1-201ENST00000334133 S100A14Q9HCY8 104 aa19.09■□□□□ 0.65
RFTN1-201ENST00000334133 SCML2Q9UQR0 700 aa19.09■□□□□ 0.65
RFTN1-201ENST00000334133 SKIP12755 728 aa19.08■□□□□ 0.65
RFTN1-201ENST00000334133 MYL4P12829 197 aa19.08■□□□□ 0.65
RFTN1-201ENST00000334133 PAMP19021 973 aa19.08■□□□□ 0.65
RFTN1-201ENST00000334133 TRIM67Q6ZTA4 783 aa19.08■□□□□ 0.65
RFTN1-201ENST00000334133 DCP1BQ8IZD4 617 aaKnown RBP19.08■□□□□ 0.65
RFTN1-201ENST00000334133 RYBPQ8N488 228 aaPredicted RBP19.08■□□□□ 0.65
RFTN1-201ENST00000334133 OR13J1Q8NGT2 312 aa19.08■□□□□ 0.65
RFTN1-201ENST00000334133 ACTRT2Q8TDY3 377 aa19.08■□□□□ 0.65
RFTN1-201ENST00000334133 RCN3Q96D15 328 aa19.08■□□□□ 0.65
RFTN1-201ENST00000334133 APOA4P06727 396 aa19.08■□□□□ 0.64
RFTN1-201ENST00000334133 MMP2P08253 660 aa19.08■□□□□ 0.64
RFTN1-201ENST00000334133 ENO3P13929 434 aaPredicted RBP19.08■□□□□ 0.64
RFTN1-201ENST00000334133 RENBPP51606 427 aa19.08■□□□□ 0.64
RFTN1-201ENST00000334133 GALNT3Q14435 633 aa19.08■□□□□ 0.64
RFTN1-201ENST00000334133 BEND5Q7L4P6 421 aa19.08■□□□□ 0.64
RFTN1-201ENST00000334133 KLHDC8BQ8IXV7 354 aa19.08■□□□□ 0.64
RFTN1-201ENST00000334133 BLOC1S5Q8TDH9 187 aa19.08■□□□□ 0.64
RFTN1-201ENST00000334133 IMP4Q96G21 291 aaKnown RBP19.08■□□□□ 0.64
RFTN1-201ENST00000334133 MRPL46Q9H2W6 279 aaKnown RBP19.08■□□□□ 0.64
RFTN1-201ENST00000334133 GPAMQ9HCL2 828 aa19.08■□□□□ 0.64
RFTN1-201ENST00000334133 RGS18Q9NS28 235 aa19.08■□□□□ 0.64
RFTN1-201ENST00000334133 MARCH2Q9P0N8 246 aa19.08■□□□□ 0.64
RFTN1-201ENST00000334133 ADAMTS6Q9UKP5 1117 aa19.08■□□□□ 0.64
RFTN1-201ENST00000334133 MIA3Q5JRA6 1907 aa19.08■□□□□ 0.64
RFTN1-201ENST00000334133 MAP3K13O43283 966 aa19.08■□□□□ 0.64
RFTN1-201ENST00000334133 OAZ2O95190 189 aa19.08■□□□□ 0.64
RFTN1-201ENST00000334133 GCKP35557 465 aa19.08■□□□□ 0.64
RFTN1-201ENST00000334133 HADHAP40939 763 aa19.08■□□□□ 0.64
RFTN1-201ENST00000334133 INHBEP58166 350 aa19.08■□□□□ 0.64
RFTN1-201ENST00000334133 DSC1Q08554 894 aa19.08■□□□□ 0.64
RFTN1-201ENST00000334133 PRKAA1Q13131 559 aa19.08■□□□□ 0.64
RFTN1-201ENST00000334133 ANKRD27Q96NW4 1050 aa19.08■□□□□ 0.64
RFTN1-201ENST00000334133 SUFUQ9UMX1 484 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms