RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 NCAM2O15394 837 aa12.44□□□□□ -0.42
VPS33B-201ENST00000333371 ATP6AP2O75787 350 aa12.44□□□□□ -0.42
VPS33B-201ENST00000333371 ADAM17P78536 824 aa12.44□□□□□ -0.42
VPS33B-201ENST00000333371 MYLK3Q32MK0 819 aa12.44□□□□□ -0.42
VPS33B-201ENST00000333371 ARL13BQ3SXY8 428 aa12.44□□□□□ -0.42
VPS33B-201ENST00000333371 XKR4Q5GH76 650 aa12.44□□□□□ -0.42
VPS33B-201ENST00000333371 PITRM1Q5JRX3 1037 aa12.44□□□□□ -0.42
VPS33B-201ENST00000333371 AMIGO2Q86SJ2 522 aa12.44□□□□□ -0.42
VPS33B-201ENST00000333371 LDB1Q86U70 411 aaPredicted RBP12.44□□□□□ -0.42
VPS33B-201ENST00000333371 TMEM102Q8N9M5 508 aaPredicted RBP12.44□□□□□ -0.42
VPS33B-201ENST00000333371 GRIN3AQ8TCU5 1115 aa12.44□□□□□ -0.42
VPS33B-201ENST00000333371 SH3RF2Q8TEC5 729 aa12.44□□□□□ -0.42
VPS33B-201ENST00000333371 SOCS4Q8WXH5 440 aa12.44□□□□□ -0.42
VPS33B-201ENST00000333371 PHF21BQ96EK2 531 aa12.44□□□□□ -0.42
VPS33B-201ENST00000333371 TRPV6Q9H1D0 765 aa12.44□□□□□ -0.42
VPS33B-201ENST00000333371 TRPC7Q9HCX4 862 aa12.44□□□□□ -0.42
VPS33B-201ENST00000333371 VCX3AQ9NNX9 186 aa12.44□□□□□ -0.42
VPS33B-201ENST00000333371 MIOSQ9NXC5 875 aa12.44□□□□□ -0.42
VPS33B-201ENST00000333371 ANKRD6Q9Y2G4 727 aa12.44□□□□□ -0.42
VPS33B-201ENST00000333371 TRPM7Q96QT4 1865 aa12.44□□□□□ -0.42
VPS33B-201ENST00000333371 CASTOR2A6NHX0 329 aa12.44□□□□□ -0.42
VPS33B-201ENST00000333371 HHLA1C9JL84 531 aa12.44□□□□□ -0.42
VPS33B-201ENST00000333371 MSI1O43347 362 aaKnown RBP12.44□□□□□ -0.42
VPS33B-201ENST00000333371 BCAS2O75934 225 aaPredicted RBP12.44□□□□□ -0.42
VPS33B-201ENST00000333371 APOA4P06727 396 aa12.44□□□□□ -0.42
VPS33B-201ENST00000333371 SULT2A1Q06520 285 aa12.44□□□□□ -0.42
VPS33B-201ENST00000333371 PDAP1Q13442 181 aaKnown RBP12.44□□□□□ -0.42
VPS33B-201ENST00000333371 PRPSAP1Q14558 356 aa12.44□□□□□ -0.42
VPS33B-201ENST00000333371 KLHDC10Q6PID8 442 aa12.44□□□□□ -0.42
VPS33B-201ENST00000333371 SCAMP5Q8TAC9 235 aa12.44□□□□□ -0.42
VPS33B-201ENST00000333371 GAD1Q99259 594 aa12.44□□□□□ -0.42
VPS33B-201ENST00000333371 OLFM1Q99784 485 aa12.44□□□□□ -0.42
VPS33B-201ENST00000333371 BRD8Q9H0E9 1235 aa12.44□□□□□ -0.42
VPS33B-201ENST00000333371 TSPYL2Q9H2G4 693 aaPredicted RBP12.44□□□□□ -0.42
VPS33B-201ENST00000333371 PCDHGA7Q9Y5G6 932 aa12.44□□□□□ -0.42
VPS33B-201ENST00000333371 FNDC1Q4ZHG4 1894 aaPredicted RBP12.43□□□□□ -0.42
VPS33B-201ENST00000333371 TTC24A2A3L6 582 aaPredicted RBP12.43□□□□□ -0.42
VPS33B-201ENST00000333371 C7orf72A4D263 438 aa12.43□□□□□ -0.42
VPS33B-201ENST00000333371 M0QZ92 97 aa12.43□□□□□ -0.42
VPS33B-201ENST00000333371 AP1G1O43747 822 aa12.43□□□□□ -0.42
VPS33B-201ENST00000333371 CXCR3P49682 368 aa12.43□□□□□ -0.42
VPS33B-201ENST00000333371 FRG1Q14331 258 aaKnown RBP12.43□□□□□ -0.42
VPS33B-201ENST00000333371 CYTH1Q15438 398 aa12.43□□□□□ -0.42
VPS33B-201ENST00000333371 PCID2Q5JVF3 399 aa12.43□□□□□ -0.42
VPS33B-201ENST00000333371 C17orf99Q6UX52 265 aa12.43□□□□□ -0.42
VPS33B-201ENST00000333371 ARHGAP12Q8IWW6 846 aa12.43□□□□□ -0.42
VPS33B-201ENST00000333371 ZFP28Q8NHY6 868 aa12.43□□□□□ -0.42
VPS33B-201ENST00000333371 RDH11Q8TC12 318 aa12.43□□□□□ -0.42
VPS33B-201ENST00000333371 HASPINQ8TF76 798 aa12.43□□□□□ -0.42
VPS33B-201ENST00000333371 LRTOMTQ8WZ04 291 aa12.43□□□□□ -0.42
VPS33B-201ENST00000333371 ZFYVE28Q9HCC9 887 aa12.43□□□□□ -0.42
VPS33B-201ENST00000333371 NMRK2Q9NPI5 230 aa12.43□□□□□ -0.42
VPS33B-201ENST00000333371 CNGB3Q9NQW8 809 aa12.43□□□□□ -0.42
VPS33B-201ENST00000333371 MID2Q9UJV3 735 aa12.43□□□□□ -0.42
VPS33B-201ENST00000333371 Q9Y3F1 56 aa12.43□□□□□ -0.42
VPS33B-201ENST00000333371 SLC4A7Q9Y6M7 1214 aa12.43□□□□□ -0.42
VPS33B-201ENST00000333371 FBP2O00757 339 aa12.43□□□□□ -0.42
VPS33B-201ENST00000333371 HLA-DQB2P05538 268 aa12.43□□□□□ -0.42
VPS33B-201ENST00000333371 AKR1A1P14550 325 aa12.43□□□□□ -0.42
VPS33B-201ENST00000333371 BDNFP23560 247 aa12.43□□□□□ -0.42
VPS33B-201ENST00000333371 YWHAQP27348 245 aa12.43□□□□□ -0.42
VPS33B-201ENST00000333371 RPL10P27635 214 aaKnown RBP12.43□□□□□ -0.42
VPS33B-201ENST00000333371 RPL5P46777 297 aaKnown RBP12.43□□□□□ -0.42
VPS33B-201ENST00000333371 HCAR3P49019 387 aa12.43□□□□□ -0.42
VPS33B-201ENST00000333371 INHBCP55103 352 aa12.43□□□□□ -0.42
VPS33B-201ENST00000333371 PSME3P61289 254 aa12.43□□□□□ -0.42
VPS33B-201ENST00000333371 DYNC1I2Q13409 638 aaKnown RBP12.43□□□□□ -0.42
VPS33B-201ENST00000333371 CLEC6AQ6EIG7 209 aa12.43□□□□□ -0.42
VPS33B-201ENST00000333371 IFNL1Q8IU54 200 aa12.43□□□□□ -0.42
VPS33B-201ENST00000333371 SLC45A3Q96JT2 553 aa12.43□□□□□ -0.42
VPS33B-201ENST00000333371 ZNF512Q96ME7 567 aaPredicted RBP12.43□□□□□ -0.42
VPS33B-201ENST00000333371 PPP1R10Q96QC0 940 aaKnown RBP12.43□□□□□ -0.42
VPS33B-201ENST00000333371 PHF12Q96QT6 1004 aa12.43□□□□□ -0.42
VPS33B-201ENST00000333371 MRPL46Q9H2W6 279 aaKnown RBP12.43□□□□□ -0.42
VPS33B-201ENST00000333371 FBRSL1Q9HCM7 1045 aaKnown RBP12.43□□□□□ -0.42
VPS33B-201ENST00000333371 VTI1BQ9UEU0 232 aa12.43□□□□□ -0.42
VPS33B-201ENST00000333371 SFMBT1Q9UHJ3 866 aa12.43□□□□□ -0.42
VPS33B-201ENST00000333371 NEU3Q9UQ49 428 aa12.43□□□□□ -0.42
VPS33B-201ENST00000333371 C9JVG2 144 aa12.42□□□□□ -0.42
VPS33B-201ENST00000333371 PCSK6P29122 969 aa12.42□□□□□ -0.42
VPS33B-201ENST00000333371 NME5P56597 212 aa12.42□□□□□ -0.42
VPS33B-201ENST00000333371 PURAQ00577 322 aaKnown RBP12.42□□□□□ -0.42
VPS33B-201ENST00000333371 AGKQ53H12 422 aa12.42□□□□□ -0.42
VPS33B-201ENST00000333371 ATPAF2Q8N5M1 289 aa12.42□□□□□ -0.42
VPS33B-201ENST00000333371 SPPL2BQ8TCT7 592 aa12.42□□□□□ -0.42
VPS33B-201ENST00000333371 DQX1Q8TE96 717 aaKnown RBP12.42□□□□□ -0.42
VPS33B-201ENST00000333371 TMEM209Q96SK2 561 aa12.42□□□□□ -0.42
VPS33B-201ENST00000333371 SLC39A8Q9C0K1 460 aa12.42□□□□□ -0.42
VPS33B-201ENST00000333371 COQ10BQ9H8M1 238 aa12.42□□□□□ -0.42
VPS33B-201ENST00000333371 MPP6Q9NZW5 540 aa12.42□□□□□ -0.42
VPS33B-201ENST00000333371 RAB26Q9ULW5 256 aa12.42□□□□□ -0.42
VPS33B-201ENST00000333371 SMIM31A0A1B0GVY4 71 aa12.42□□□□□ -0.42
VPS33B-201ENST00000333371 PRORSD1PA6NEY8 169 aa12.42□□□□□ -0.42
VPS33B-201ENST00000333371 MTSS1O43312 755 aa12.42□□□□□ -0.42
VPS33B-201ENST00000333371 TADA2AO75478 443 aa12.42□□□□□ -0.42
VPS33B-201ENST00000333371 MOCS2O96007 188 aaPredicted RBP12.42□□□□□ -0.42
VPS33B-201ENST00000333371 MGAT5BQ3V5L5 792 aa12.42□□□□□ -0.42
VPS33B-201ENST00000333371 RAB41Q5JT25 222 aa12.42□□□□□ -0.42
VPS33B-201ENST00000333371 GNASQ5JWF2 1037 aa12.42□□□□□ -0.42
VPS33B-201ENST00000333371 RGMBQ6NW40 437 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms