RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 ZCCHC9Q8N567 271 aaKnown RBP9.62□□□□□ -0.87
C11orf54-201ENST00000331239 OR7D4Q8NG98 312 aa9.62□□□□□ -0.87
C11orf54-201ENST00000331239 PWWP2AQ96N64 755 aa9.62□□□□□ -0.87
C11orf54-201ENST00000331239 NUDCD1Q96RS6 583 aa9.62□□□□□ -0.87
C11orf54-201ENST00000331239 P2RY13Q9BPV8 354 aa9.62□□□□□ -0.87
C11orf54-201ENST00000331239 ELAC2Q9BQ52 826 aaKnown RBP9.62□□□□□ -0.87
C11orf54-201ENST00000331239 IER2Q9BTL4 223 aa9.62□□□□□ -0.87
C11orf54-201ENST00000331239 SPON2Q9BUD6 331 aa9.62□□□□□ -0.87
C11orf54-201ENST00000331239 YY1AP1Q9H869 796 aa9.62□□□□□ -0.87
C11orf54-201ENST00000331239 RBM22Q9NW64 420 aaKnown RBP eCLIP9.62□□□□□ -0.87
C11orf54-201ENST00000331239 SORCS3Q9UPU3 1222 aa9.62□□□□□ -0.87
C11orf54-201ENST00000331239 ERVW-1Q9UQF0 538 aa9.62□□□□□ -0.87
C11orf54-201ENST00000331239 MRPS17Q9Y2R5 130 aaKnown RBP9.62□□□□□ -0.87
C11orf54-201ENST00000331239 SHROOM3Q8TF72 1996 aa9.62□□□□□ -0.87
C11orf54-201ENST00000331239 MYOFQ9NZM1 2061 aa9.62□□□□□ -0.87
C11orf54-201ENST00000331239 WASH3PC4AMC7 463 aa9.61□□□□□ -0.87
C11orf54-201ENST00000331239 DNAJC8O75937 253 aaPredicted RBP9.61□□□□□ -0.87
C11orf54-201ENST00000331239 ABHD2P08910 425 aa9.61□□□□□ -0.87
C11orf54-201ENST00000331239 BRAFP15056 766 aa9.61□□□□□ -0.87
C11orf54-201ENST00000331239 CREB1P16220 341 aa9.61□□□□□ -0.87
C11orf54-201ENST00000331239 MZF1P28698 734 aaPredicted RBP9.61□□□□□ -0.87
C11orf54-201ENST00000331239 SUOXP51687 545 aa9.61□□□□□ -0.87
C11orf54-201ENST00000331239 GTF2A1P52655 376 aaPredicted RBP9.61□□□□□ -0.87
C11orf54-201ENST00000331239 SNRPD1P62314 119 aaKnown RBP9.61□□□□□ -0.87
C11orf54-201ENST00000331239 ARF5P84085 180 aa9.61□□□□□ -0.87
C11orf54-201ENST00000331239 GRM2Q14416 872 aa9.61□□□□□ -0.87
C11orf54-201ENST00000331239 ZNF235Q14590 738 aa9.61□□□□□ -0.87
C11orf54-201ENST00000331239 STAT4Q14765 748 aa9.61□□□□□ -0.87
C11orf54-201ENST00000331239 HIBCHQ6NVY1 386 aaPredicted RBP9.61□□□□□ -0.87
C11orf54-201ENST00000331239 PID1Q7Z2X4 250 aa9.61□□□□□ -0.87
C11orf54-201ENST00000331239 ANKRD42Q8N9B4 389 aa9.61□□□□□ -0.87
C11orf54-201ENST00000331239 IMP4Q96G21 291 aaKnown RBP9.61□□□□□ -0.87
C11orf54-201ENST00000331239 CCDC77Q9BR77 488 aa9.61□□□□□ -0.87
C11orf54-201ENST00000331239 CINPQ9BW66 212 aaPredicted RBP9.61□□□□□ -0.87
C11orf54-201ENST00000331239 OSBPL6Q9BZF3 934 aa9.61□□□□□ -0.87
C11orf54-201ENST00000331239 KLHL8Q9P2G9 620 aaPredicted RBP9.61□□□□□ -0.87
C11orf54-201ENST00000331239 INTS6Q9UL03 887 aaKnown RBP9.61□□□□□ -0.87
C11orf54-201ENST00000331239 PLA2G4CQ9UP65 541 aa9.61□□□□□ -0.87
C11orf54-201ENST00000331239 TICRRQ7Z2Z1 1910 aa9.61□□□□□ -0.87
C11orf54-201ENST00000331239 TCP11X1B4DZS4 312 aa9.61□□□□□ -0.87
C11orf54-201ENST00000331239 SPECC1L-ADORA2AF8WAN1 911 aa9.61□□□□□ -0.87
C11orf54-201ENST00000331239 CBX4O00257 560 aa9.61□□□□□ -0.87
C11orf54-201ENST00000331239 SNX3O60493 162 aa9.61□□□□□ -0.87
C11orf54-201ENST00000331239 KAT7O95251 611 aa9.61□□□□□ -0.87
C11orf54-201ENST00000331239 JCHAINP01591 159 aa9.61□□□□□ -0.87
C11orf54-201ENST00000331239 CR2P20023 1033 aa9.61□□□□□ -0.87
C11orf54-201ENST00000331239 CTHP32929 405 aa9.61□□□□□ -0.87
C11orf54-201ENST00000331239 ST8SIA6P61647 398 aa9.61□□□□□ -0.87
C11orf54-201ENST00000331239 MRPS21P82921 87 aaKnown RBP9.61□□□□□ -0.87
C11orf54-201ENST00000331239 RAD51Q06609 339 aa9.61□□□□□ -0.87
C11orf54-201ENST00000331239 FUT11Q495W5 492 aa9.61□□□□□ -0.87
C11orf54-201ENST00000331239 TMEM196Q5HYL7 178 aa9.61□□□□□ -0.87
C11orf54-201ENST00000331239 DGKKQ5KSL6 1271 aa9.61□□□□□ -0.87
C11orf54-201ENST00000331239 TRIM68Q6AZZ1 485 aa9.61□□□□□ -0.87
C11orf54-201ENST00000331239 CYB5D1Q6P9G0 228 aa9.61□□□□□ -0.87
C11orf54-201ENST00000331239 RAVER1Q8IY67 606 aaKnown RBP9.61□□□□□ -0.87
C11orf54-201ENST00000331239 RIBC1Q8N443 379 aaPredicted RBP9.61□□□□□ -0.87
C11orf54-201ENST00000331239 OR52K2Q8NGK3 314 aa9.61□□□□□ -0.87
C11orf54-201ENST00000331239 SGSM3Q96HU1 749 aa9.61□□□□□ -0.87
C11orf54-201ENST00000331239 C9orf72Q96LT7 481 aa9.61□□□□□ -0.87
C11orf54-201ENST00000331239 RBM15Q96T37 977 aaKnown RBP eCLIP9.61□□□□□ -0.87
C11orf54-201ENST00000331239 LRRC40Q9H9A6 602 aa9.61□□□□□ -0.87
C11orf54-201ENST00000331239 SLC24A3Q9HC58 644 aa9.61□□□□□ -0.87
C11orf54-201ENST00000331239 XAB2Q9HCS7 855 aaKnown RBP9.61□□□□□ -0.87
C11orf54-201ENST00000331239 KCNK9Q9NPC2 374 aa9.61□□□□□ -0.87
C11orf54-201ENST00000331239 FGFR1OP2Q9NVK5 253 aa9.61□□□□□ -0.87
C11orf54-201ENST00000331239 GEMIN8Q9NWZ8 242 aaKnown RBP9.61□□□□□ -0.87
C11orf54-201ENST00000331239 THAP10Q9P2Z0 257 aaPredicted RBP9.61□□□□□ -0.87
C11orf54-201ENST00000331239 SLC12A4Q9UP95 1085 aa9.61□□□□□ -0.87
C11orf54-201ENST00000331239 J3KR12 359 aa9.6□□□□□ -0.87
C11orf54-201ENST00000331239 SOCS5O75159 536 aa9.6□□□□□ -0.87
C11orf54-201ENST00000331239 IGSF6O95976 241 aa9.6□□□□□ -0.87
C11orf54-201ENST00000331239 NFKBIAP25963 317 aa9.6□□□□□ -0.87
C11orf54-201ENST00000331239 GRSF1Q12849 480 aaKnown RBP eCLIP9.6□□□□□ -0.87
C11orf54-201ENST00000331239 SF3A3Q12874 501 aaKnown RBP eCLIP9.6□□□□□ -0.87
C11orf54-201ENST00000331239 CYTH1Q15438 398 aa9.6□□□□□ -0.87
C11orf54-201ENST00000331239 SWT1Q5T5J6 900 aaKnown RBP9.6□□□□□ -0.87
C11orf54-201ENST00000331239 ASTLQ6HA08 431 aaPredicted RBP9.6□□□□□ -0.87
C11orf54-201ENST00000331239 TRPM8Q7Z2W7 1104 aa9.6□□□□□ -0.87
C11orf54-201ENST00000331239 ZNF354CQ86Y25 554 aa9.6□□□□□ -0.87
C11orf54-201ENST00000331239 APCDD1Q8J025 514 aa9.6□□□□□ -0.87
C11orf54-201ENST00000331239 WFDC5Q8TCV5 224 aa9.6□□□□□ -0.87
C11orf54-201ENST00000331239 LRRC39Q96DD0 335 aa9.6□□□□□ -0.87
C11orf54-201ENST00000331239 ZNF641Q96N77 438 aaPredicted RBP9.6□□□□□ -0.87
C11orf54-201ENST00000331239 OSBPL1AQ9BXW6 950 aa9.6□□□□□ -0.87
C11orf54-201ENST00000331239 ARNT2Q9HBZ2 717 aa9.6□□□□□ -0.87
C11orf54-201ENST00000331239 FARP1Q9Y4F1 1045 aaPredicted RBP9.6□□□□□ -0.87
C11orf54-201ENST00000331239 UNC80Q8N2C7 3258 aa9.6□□□□□ -0.87
C11orf54-201ENST00000331239 TMCC1O94876 653 aa9.6□□□□□ -0.87
C11orf54-201ENST00000331239 POP4O95707 220 aaKnown RBP9.6□□□□□ -0.87
C11orf54-201ENST00000331239 CD160O95971 181 aa9.6□□□□□ -0.87
C11orf54-201ENST00000331239 IFNB1P01574 187 aa9.6□□□□□ -0.87
C11orf54-201ENST00000331239 SERPINF2P08697 491 aa9.6□□□□□ -0.87
C11orf54-201ENST00000331239 TSHRP16473 764 aa9.6□□□□□ -0.87
C11orf54-201ENST00000331239 MAGEA4P43358 317 aa9.6□□□□□ -0.87
C11orf54-201ENST00000331239 SFSWAPQ12872 951 aaKnown RBP9.6□□□□□ -0.87
C11orf54-201ENST00000331239 GPS1Q13098 491 aa9.6□□□□□ -0.87
C11orf54-201ENST00000331239 RNASEH2BQ5TBB1 312 aaKnown RBP9.6□□□□□ -0.87
C11orf54-201ENST00000331239 NAPEPLDQ6IQ20 393 aa9.6□□□□□ -0.87
C11orf54-201ENST00000331239 PRUNE1Q86TP1 453 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms