RNA–Protein interactions for RNA: ENST00000330852.9

RAB28-202, Transcript of RAB28, member RAS oncogene family, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RAB28, Length 1,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-202ENST00000330852 ERMARDQ5T6L9 678 aa18.34■□□□□ 0.53
RAB28-202ENST00000330852 DNAAF5Q86Y56 855 aa18.34■□□□□ 0.53
RAB28-202ENST00000330852 CENPTQ96BT3 561 aa18.34■□□□□ 0.53
RAB28-202ENST00000330852 KLC2Q9H0B6 622 aa18.34■□□□□ 0.53
RAB28-202ENST00000330852 LRRC19Q9H756 370 aa18.34■□□□□ 0.53
RAB28-202ENST00000330852 TAS2R14Q9NYV8 317 aa18.34■□□□□ 0.53
RAB28-202ENST00000330852 AP4E1Q9UPM8 1137 aa18.34■□□□□ 0.53
RAB28-202ENST00000330852 CLCA2Q9UQC9 943 aa18.34■□□□□ 0.53
RAB28-202ENST00000330852 LRRK1Q38SD2 2015 aa18.33■□□□□ 0.53
RAB28-202ENST00000330852 A0A087WV48 116 aa18.33■□□□□ 0.52
RAB28-202ENST00000330852 TMEM191CA6NGB0 347 aa18.33■□□□□ 0.52
RAB28-202ENST00000330852 ARHGAP42A6NI28 874 aa18.33■□□□□ 0.52
RAB28-202ENST00000330852 TM7SF2O76062 418 aa18.33■□□□□ 0.52
RAB28-202ENST00000330852 ZNF165P49910 485 aa18.33■□□□□ 0.52
RAB28-202ENST00000330852 ELP6Q0PNE2 266 aa18.33■□□□□ 0.52
RAB28-202ENST00000330852 DCBLD1Q8N8Z6 715 aa18.33■□□□□ 0.52
RAB28-202ENST00000330852 CXorf40AQ8TE69 158 aa18.33■□□□□ 0.52
RAB28-202ENST00000330852 TRIM11Q96F44 468 aa18.33■□□□□ 0.52
RAB28-202ENST00000330852 TBATAQ96M53 351 aa18.33■□□□□ 0.52
RAB28-202ENST00000330852 ZNF641Q96N77 438 aaPredicted RBP18.33■□□□□ 0.52
RAB28-202ENST00000330852 LHX3Q9UBR4 397 aa18.33■□□□□ 0.52
RAB28-202ENST00000330852 ANKRD36A6QL64 1941 aa18.33■□□□□ 0.52
RAB28-202ENST00000330852 A0A1B0GTH6 734 aa18.32■□□□□ 0.52
RAB28-202ENST00000330852 TPP1O14773 563 aa18.32■□□□□ 0.52
RAB28-202ENST00000330852 FFAR2O15552 330 aa18.32■□□□□ 0.52
RAB28-202ENST00000330852 SPINT1O43278 529 aa18.32■□□□□ 0.52
RAB28-202ENST00000330852 TIMP2P16035 220 aa18.32■□□□□ 0.52
RAB28-202ENST00000330852 XPAP23025 273 aaPredicted RBP18.32■□□□□ 0.52
RAB28-202ENST00000330852 CSNK1DP48730 415 aa18.32■□□□□ 0.52
RAB28-202ENST00000330852 INSM1Q01101 510 aaPredicted RBP18.32■□□□□ 0.52
RAB28-202ENST00000330852 PDE1CQ14123 709 aaPredicted RBP18.32■□□□□ 0.52
RAB28-202ENST00000330852 CYTH1Q15438 398 aa18.32■□□□□ 0.52
RAB28-202ENST00000330852 APOLD1Q96LR9 279 aa18.32■□□□□ 0.52
RAB28-202ENST00000330852 HAUS4Q9H6D7 363 aa18.32■□□□□ 0.52
RAB28-202ENST00000330852 PDFQ9HBH1 243 aa18.32■□□□□ 0.52
RAB28-202ENST00000330852 MRPL47Q9HD33 250 aaKnown RBP18.32■□□□□ 0.52
RAB28-202ENST00000330852 RALYQ9UKM9 306 aaKnown RBP18.32■□□□□ 0.52
RAB28-202ENST00000330852 SCINQ9Y6U3 715 aa18.32■□□□□ 0.52
RAB28-202ENST00000330852 TSPAN11A1L157 253 aa18.32■□□□□ 0.52
RAB28-202ENST00000330852 TMCO5BA8MYB1 307 aa18.32■□□□□ 0.52
RAB28-202ENST00000330852 K7ESM1 405 aa18.32■□□□□ 0.52
RAB28-202ENST00000330852 EEF2KO00418 725 aaKnown RBP18.32■□□□□ 0.52
RAB28-202ENST00000330852 PRAMEF11O60813 436 aa18.32■□□□□ 0.52
RAB28-202ENST00000330852 FTLP02792 175 aaPredicted RBP18.32■□□□□ 0.52
RAB28-202ENST00000330852 MYBL1P10243 752 aa18.32■□□□□ 0.52
RAB28-202ENST00000330852 HCAR3P49019 387 aa18.32■□□□□ 0.52
RAB28-202ENST00000330852 THOP1P52888 689 aa18.32■□□□□ 0.52
RAB28-202ENST00000330852 ACAP1Q15027 740 aa18.32■□□□□ 0.52
RAB28-202ENST00000330852 TMEM52BQ4KMG9 183 aa18.32■□□□□ 0.52
RAB28-202ENST00000330852 FIGNQ5HY92 759 aa18.32■□□□□ 0.52
RAB28-202ENST00000330852 ZCCHC8Q6NZY4 707 aaKnown RBP18.32■□□□□ 0.52
RAB28-202ENST00000330852 ZNF548Q8NEK5 533 aaPredicted RBP18.32■□□□□ 0.52
RAB28-202ENST00000330852 TUBGCP5Q96RT8 1024 aa18.32■□□□□ 0.52
RAB28-202ENST00000330852 SUV39H2Q9H5I1 410 aa18.32■□□□□ 0.52
RAB28-202ENST00000330852 DHX35Q9H5Z1 703 aaKnown RBP18.32■□□□□ 0.52
RAB28-202ENST00000330852 GGT7Q9UJ14 662 aa18.32■□□□□ 0.52
RAB28-202ENST00000330852 SALL4Q9UJQ4 1053 aa18.32■□□□□ 0.52
RAB28-202ENST00000330852 ITM2BQ9Y287 266 aa18.32■□□□□ 0.52
RAB28-202ENST00000330852 DAPK3O43293 454 aa18.31■□□□□ 0.52
RAB28-202ENST00000330852 PRPSAP2O60256 369 aa18.31■□□□□ 0.52
RAB28-202ENST00000330852 JUNDP17535 347 aa18.31■□□□□ 0.52
RAB28-202ENST00000330852 KLHL30Q0D2K2 578 aa18.31■□□□□ 0.52
RAB28-202ENST00000330852 RFTN1Q14699 578 aaPredicted RBP18.31■□□□□ 0.52
RAB28-202ENST00000330852 ZNF542PQ5EBM4 170 aa18.31■□□□□ 0.52
RAB28-202ENST00000330852 BRAT1Q6PJG6 821 aa18.31■□□□□ 0.52
RAB28-202ENST00000330852 ZNF571Q7Z3V5 609 aaPredicted RBP18.31■□□□□ 0.52
RAB28-202ENST00000330852 SPASTQ9UBP0 616 aa18.31■□□□□ 0.52
RAB28-202ENST00000330852 AK5Q9Y6K8 562 aa18.31■□□□□ 0.52
RAB28-202ENST00000330852 ASXL3Q9C0F0 2248 aa18.31■□□□□ 0.52
RAB28-202ENST00000330852 TMEM110-MUSTN1A8MSY1 372 aa18.3■□□□□ 0.52
RAB28-202ENST00000330852 AQP9O43315 295 aa18.3■□□□□ 0.52
RAB28-202ENST00000330852 MT-CO3P00414 261 aa18.3■□□□□ 0.52
RAB28-202ENST00000330852 PEX5P50542 639 aa18.3■□□□□ 0.52
RAB28-202ENST00000330852 UGP2Q16851 508 aa18.3■□□□□ 0.52
RAB28-202ENST00000330852 COL28A1Q2UY09 1125 aa18.3■□□□□ 0.52
RAB28-202ENST00000330852 C19orf48Q6RUI8 117 aa18.3■□□□□ 0.52
RAB28-202ENST00000330852 RFX8Q6ZV50 586 aa18.3■□□□□ 0.52
RAB28-202ENST00000330852 LZTR1Q8N653 840 aa18.3■□□□□ 0.52
RAB28-202ENST00000330852 SNRNP25Q9BV90 132 aaKnown RBP18.3■□□□□ 0.52
RAB28-202ENST00000330852 CNOT8Q9UFF9 292 aaKnown RBP18.3■□□□□ 0.52
RAB28-202ENST00000330852 BZW2Q9Y6E2 419 aaKnown RBP18.3■□□□□ 0.52
RAB28-202ENST00000330852 CFAP69A5D8W1 941 aa18.29■□□□□ 0.52
RAB28-202ENST00000330852 OPA1O60313 960 aa18.29■□□□□ 0.52
RAB28-202ENST00000330852 MMP20O60882 483 aa18.29■□□□□ 0.52
RAB28-202ENST00000330852 NSUN2Q08J23 767 aaKnown RBP eCLIP18.29■□□□□ 0.52
RAB28-202ENST00000330852 EIF2B5Q13144 721 aaKnown RBP18.29■□□□□ 0.52
RAB28-202ENST00000330852 NR1I3Q14994 352 aa18.29■□□□□ 0.52
RAB28-202ENST00000330852 AGERQ15109 404 aa18.29■□□□□ 0.52
RAB28-202ENST00000330852 AFMIDQ63HM1 303 aa18.29■□□□□ 0.52
RAB28-202ENST00000330852 ERAP2Q6P179 960 aa18.29■□□□□ 0.52
RAB28-202ENST00000330852 VPS36Q86VN1 386 aa18.29■□□□□ 0.52
RAB28-202ENST00000330852 ARFGAP1Q8N6T3 406 aa18.29■□□□□ 0.52
RAB28-202ENST00000330852 SLC39A8Q9C0K1 460 aa18.29■□□□□ 0.52
RAB28-202ENST00000330852 ISCUQ9H1K1 167 aa18.29■□□□□ 0.52
RAB28-202ENST00000330852 GPATCH2LQ9NWQ4 482 aa18.29■□□□□ 0.52
RAB28-202ENST00000330852 PCSK1NQ9UHG2 260 aa18.29■□□□□ 0.52
RAB28-202ENST00000330852 J3KR12 359 aa18.29■□□□□ 0.52
RAB28-202ENST00000330852 DDX3XO00571 662 aaKnown RBP eCLIP18.29■□□□□ 0.52
RAB28-202ENST00000330852 SERPINC1P01008 464 aa18.29■□□□□ 0.52
RAB28-202ENST00000330852 ERCC2P18074 760 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms