RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 PSMB7Q99436 277 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 AGPAT1Q99943 283 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 ZYG11BQ9C0D3 744 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 MAGEH1Q9H213 219 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 KCNF1Q9H3M0 494 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 SMOC1Q9H4F8 434 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 PREBQ9HCU5 417 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 METTL5Q9NRN9 209 aaKnown RBP6.48□□□□□ -1.37
SMG1-201ENST00000330588 ADAM22Q9P0K1 906 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 ADGRE2Q9UHX3 823 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 VANGL2Q9ULK5 521 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 DMTF1Q9Y222 760 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 WDFY4Q6ZS81 3184 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 COL5A1P20908 1838 aaPredicted RBP6.47□□□□□ -1.37
SMG1-201ENST00000330588 A0A1W2PPC4 97 aa6.47□□□□□ -1.37
SMG1-201ENST00000330588 ZSCAN5CA6NGD5 496 aaPredicted RBP6.47□□□□□ -1.37
SMG1-201ENST00000330588 WASH4PA8MWX3 477 aa6.47□□□□□ -1.37
SMG1-201ENST00000330588 TTC34A8MYJ7 566 aa6.47□□□□□ -1.37
SMG1-201ENST00000330588 I6L893 689 aaPredicted RBP6.47□□□□□ -1.37
SMG1-201ENST00000330588 PLRG1O43660 514 aaKnown RBP6.47□□□□□ -1.37
SMG1-201ENST00000330588 PCDHGA12O60330 932 aa6.47□□□□□ -1.37
SMG1-201ENST00000330588 MAGEC1O60732 1142 aa6.47□□□□□ -1.37
SMG1-201ENST00000330588 RNGTTO60942 597 aaKnown RBP6.47□□□□□ -1.37
SMG1-201ENST00000330588 TIAF1O95411 115 aa6.47□□□□□ -1.37
SMG1-201ENST00000330588 PRNPP04156 253 aa6.47□□□□□ -1.37
SMG1-201ENST00000330588 RHOCP08134 193 aa6.47□□□□□ -1.37
SMG1-201ENST00000330588 TFE3P19532 575 aaPredicted RBP6.47□□□□□ -1.37
SMG1-201ENST00000330588 L1CAMP32004 1257 aa6.47□□□□□ -1.37
SMG1-201ENST00000330588 SLC8A1P32418 973 aa6.47□□□□□ -1.37
SMG1-201ENST00000330588 ACSL1P33121 698 aa6.47□□□□□ -1.37
SMG1-201ENST00000330588 KLK7P49862 253 aa6.47□□□□□ -1.37
SMG1-201ENST00000330588 NOVA1P51513 510 aaKnown RBP6.47□□□□□ -1.37
SMG1-201ENST00000330588 ZNF143P52747 638 aaPredicted RBP6.47□□□□□ -1.37
SMG1-201ENST00000330588 GALCP54803 685 aa6.47□□□□□ -1.37
SMG1-201ENST00000330588 RNASE9P60153 205 aaKnown RBP6.47□□□□□ -1.37
SMG1-201ENST00000330588 ACAP1Q15027 740 aa6.47□□□□□ -1.37
SMG1-201ENST00000330588 IQCB1Q15051 598 aa6.47□□□□□ -1.37
SMG1-201ENST00000330588 ZNF423Q2M1K9 1284 aa6.47□□□□□ -1.37
SMG1-201ENST00000330588 SPRED3Q2MJR0 410 aa6.47□□□□□ -1.37
SMG1-201ENST00000330588 SKOR2Q2VWA4 1001 aaPredicted RBP6.47□□□□□ -1.37
SMG1-201ENST00000330588 CCDC14Q49A88 953 aa6.47□□□□□ -1.37
SMG1-201ENST00000330588 MEI1Q5TIA1 1274 aa6.47□□□□□ -1.37
SMG1-201ENST00000330588 ACAD10Q6JQN1 1059 aa6.47□□□□□ -1.37
SMG1-201ENST00000330588 RETSATQ6NUM9 610 aa6.47□□□□□ -1.37
SMG1-201ENST00000330588 FDX2Q6P4F2 183 aa6.47□□□□□ -1.37
SMG1-201ENST00000330588 ARMCX6Q7L4S7 300 aa6.47□□□□□ -1.37
SMG1-201ENST00000330588 IRF2BP2Q7Z5L9 587 aa6.47□□□□□ -1.37
SMG1-201ENST00000330588 IQCHQ86VS3 1027 aa6.47□□□□□ -1.37
SMG1-201ENST00000330588 NLRP14Q86W24 1093 aa6.47□□□□□ -1.37
SMG1-201ENST00000330588 PSTKQ8IV42 348 aaKnown RBP6.47□□□□□ -1.37
SMG1-201ENST00000330588 MCOLN2Q8IZK6 566 aa6.47□□□□□ -1.37
SMG1-201ENST00000330588 PCDH20Q8N6Y1 951 aaKnown RBP6.47□□□□□ -1.37
SMG1-201ENST00000330588 RXFP2Q8WXD0 754 aa6.47□□□□□ -1.37
SMG1-201ENST00000330588 BIRC7Q96CA5 298 aa6.47□□□□□ -1.37
SMG1-201ENST00000330588 LRIG1Q96JA1 1093 aa6.47□□□□□ -1.37
SMG1-201ENST00000330588 CFAP57Q96MR6 1250 aa6.47□□□□□ -1.37
SMG1-201ENST00000330588 PCDHB18PQ96TA0 734 aa6.47□□□□□ -1.37
SMG1-201ENST00000330588 OMDQ99983 421 aa6.47□□□□□ -1.37
SMG1-201ENST00000330588 ORAI3Q9BRQ5 295 aa6.47□□□□□ -1.37
SMG1-201ENST00000330588 CNPY3Q9BT09 278 aa6.47□□□□□ -1.37
SMG1-201ENST00000330588 SELENOOQ9BVL4 669 aa6.47□□□□□ -1.37
SMG1-201ENST00000330588 ACE2Q9BYF1 805 aaPredicted RBP6.47□□□□□ -1.37
SMG1-201ENST00000330588 TTYH3Q9C0H2 523 aa6.47□□□□□ -1.37
SMG1-201ENST00000330588 SIK2Q9H0K1 926 aa6.47□□□□□ -1.37
SMG1-201ENST00000330588 SOX17Q9H6I2 414 aaPredicted RBP6.47□□□□□ -1.37
SMG1-201ENST00000330588 CD93Q9NPY3 652 aa6.47□□□□□ -1.37
SMG1-201ENST00000330588 TMEM248Q9NWD8 314 aa6.47□□□□□ -1.37
SMG1-201ENST00000330588 FBXL12Q9NXK8 326 aa6.47□□□□□ -1.37
SMG1-201ENST00000330588 FAM8A1Q9UBU6 413 aa6.47□□□□□ -1.37
SMG1-201ENST00000330588 OR12D3Q9UGF7 316 aa6.47□□□□□ -1.37
SMG1-201ENST00000330588 SLCO3A1Q9UIG8 710 aa6.47□□□□□ -1.37
SMG1-201ENST00000330588 VPS28Q9UK41 221 aa6.47□□□□□ -1.37
SMG1-201ENST00000330588 ANGPTL2Q9UKU9 493 aa6.47□□□□□ -1.37
SMG1-201ENST00000330588 PPM1HQ9ULR3 514 aa6.47□□□□□ -1.37
SMG1-201ENST00000330588 BZW2Q9Y6E2 419 aaKnown RBP6.47□□□□□ -1.37
SMG1-201ENST00000330588 ATXN2Q99700 1313 aaKnown RBP6.47□□□□□ -1.37
SMG1-201ENST00000330588 SYNJ2BP-COX16A0A087WUM0 186 aa6.46□□□□□ -1.38
SMG1-201ENST00000330588 FAM221BA6H8Z2 402 aa6.46□□□□□ -1.38
SMG1-201ENST00000330588 TMEM8BA6NDV4 472 aa6.46□□□□□ -1.38
SMG1-201ENST00000330588 GOLGA8SH3BPF8 625 aa6.46□□□□□ -1.38
SMG1-201ENST00000330588 GIPC1O14908 333 aa6.46□□□□□ -1.38
SMG1-201ENST00000330588 VILLO15195 856 aa6.46□□□□□ -1.38
SMG1-201ENST00000330588 MID1O15344 667 aa6.46□□□□□ -1.38
SMG1-201ENST00000330588 FGF10O15520 208 aaPredicted RBP6.46□□□□□ -1.38
SMG1-201ENST00000330588 FLRT2O43155 660 aa6.46□□□□□ -1.38
SMG1-201ENST00000330588 AP1G1O43747 822 aa6.46□□□□□ -1.38
SMG1-201ENST00000330588 ZMPSTE24O75844 475 aa6.46□□□□□ -1.38
SMG1-201ENST00000330588 IGHV4-34P06331 123 aa6.46□□□□□ -1.38
SMG1-201ENST00000330588 MYBL1P10243 752 aa6.46□□□□□ -1.38
SMG1-201ENST00000330588 SRCP12931 536 aa6.46□□□□□ -1.38
SMG1-201ENST00000330588 CD59P13987 128 aa6.46□□□□□ -1.38
SMG1-201ENST00000330588 GPD1P21695 349 aa6.46□□□□□ -1.38
SMG1-201ENST00000330588 MAP4P27816 1152 aaKnown RBP6.46□□□□□ -1.38
SMG1-201ENST00000330588 OR1E1P30953 314 aa6.46□□□□□ -1.38
SMG1-201ENST00000330588 DRD3P35462 400 aa6.46□□□□□ -1.38
SMG1-201ENST00000330588 ARL4DP49703 201 aa6.46□□□□□ -1.38
SMG1-201ENST00000330588 ADPRHP54922 357 aa6.46□□□□□ -1.38
SMG1-201ENST00000330588 HDAC4P56524 1084 aa6.46□□□□□ -1.38
SMG1-201ENST00000330588 YBEYP58557 167 aaPredicted RBP6.46□□□□□ -1.38
SMG1-201ENST00000330588 GNA12Q03113 381 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms