RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 CNPY3Q9BT09 278 aa8.46□□□□□ -1.05
SKA2-201ENST00000330137 FUNDC2Q9BWH2 189 aa8.46□□□□□ -1.05
SKA2-201ENST00000330137 RETREG1Q9H6L5 497 aa8.46□□□□□ -1.05
SKA2-201ENST00000330137 NMRAL1Q9HBL8 299 aa8.46□□□□□ -1.05
SKA2-201ENST00000330137 SNX15Q9NRS6 342 aa8.46□□□□□ -1.05
SKA2-201ENST00000330137 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.46□□□□□ -1.05
SKA2-201ENST00000330137 MTMR10Q9NXD2 777 aa8.46□□□□□ -1.05
SKA2-201ENST00000330137 STMN3Q9NZ72 180 aa8.46□□□□□ -1.05
SKA2-201ENST00000330137 MTF2Q9Y483 593 aaPredicted RBP8.46□□□□□ -1.05
SKA2-201ENST00000330137 UTRNP46939 3433 aa8.46□□□□□ -1.05
SKA2-201ENST00000330137 TESPA1A2RU30 521 aaPredicted RBP8.46□□□□□ -1.06
SKA2-201ENST00000330137 MED7O43513 233 aa8.46□□□□□ -1.06
SKA2-201ENST00000330137 GAS2O43903 313 aaKnown RBP8.46□□□□□ -1.06
SKA2-201ENST00000330137 KATNA1O75449 491 aa8.46□□□□□ -1.06
SKA2-201ENST00000330137 SNX4O95219 450 aa8.46□□□□□ -1.06
SKA2-201ENST00000330137 MSL3P1P0C860 447 aa8.46□□□□□ -1.06
SKA2-201ENST00000330137 CDH1P12830 882 aa8.46□□□□□ -1.06
SKA2-201ENST00000330137 CRHBPP24387 322 aa8.46□□□□□ -1.06
SKA2-201ENST00000330137 RRM2P31350 389 aa8.46□□□□□ -1.06
SKA2-201ENST00000330137 MSX2P35548 267 aaPredicted RBP8.46□□□□□ -1.06
SKA2-201ENST00000330137 CASP3P42574 277 aa8.46□□□□□ -1.06
SKA2-201ENST00000330137 NUBP1P53384 320 aa8.46□□□□□ -1.06
SKA2-201ENST00000330137 LIMK2P53671 638 aa8.46□□□□□ -1.06
SKA2-201ENST00000330137 CDK10Q15131 360 aa8.46□□□□□ -1.06
SKA2-201ENST00000330137 TDRD10Q5VZ19 366 aaKnown RBP8.46□□□□□ -1.06
SKA2-201ENST00000330137 TWF2Q6IBS0 349 aaKnown RBP8.46□□□□□ -1.06
SKA2-201ENST00000330137 ZNF544Q6NX49 715 aa8.46□□□□□ -1.06
SKA2-201ENST00000330137 TMC5Q6UXY8 1006 aa8.46□□□□□ -1.06
SKA2-201ENST00000330137 NAPRTQ6XQN6 538 aa8.46□□□□□ -1.06
SKA2-201ENST00000330137 IDO2Q6ZQW0 420 aa8.46□□□□□ -1.06
SKA2-201ENST00000330137 RFPL4BQ6ZWI9 263 aa8.46□□□□□ -1.06
SKA2-201ENST00000330137 FAM20CQ8IXL6 584 aa8.46□□□□□ -1.06
SKA2-201ENST00000330137 CLYBLQ8N0X4 340 aa8.46□□□□□ -1.06
SKA2-201ENST00000330137 SPARTQ8N0X7 666 aa8.46□□□□□ -1.06
SKA2-201ENST00000330137 RNF148Q8N7C7 305 aa8.46□□□□□ -1.06
SKA2-201ENST00000330137 OSCP1Q8WVF1 389 aa8.46□□□□□ -1.06
SKA2-201ENST00000330137 CYGBQ8WWM9 190 aa8.46□□□□□ -1.06
SKA2-201ENST00000330137 DACH2Q96NX9 599 aa8.46□□□□□ -1.06
SKA2-201ENST00000330137 TBCBQ99426 244 aa8.46□□□□□ -1.06
SKA2-201ENST00000330137 RBBP8Q99708 897 aa8.46□□□□□ -1.06
SKA2-201ENST00000330137 NPAS2Q99743 824 aa8.46□□□□□ -1.06
SKA2-201ENST00000330137 MTMR12Q9C0I1 747 aa8.46□□□□□ -1.06
SKA2-201ENST00000330137 PCDHAC1Q9H158 963 aa8.46□□□□□ -1.06
SKA2-201ENST00000330137 WDR55Q9H6Y2 383 aaPredicted RBP8.46□□□□□ -1.06
SKA2-201ENST00000330137 GPBP1L1Q9HC44 474 aaPredicted RBP8.46□□□□□ -1.06
SKA2-201ENST00000330137 SYBUQ9NX95 663 aa8.46□□□□□ -1.06
SKA2-201ENST00000330137 ZNF229Q9UJW7 825 aa8.46□□□□□ -1.06
SKA2-201ENST00000330137 USP18Q9UMW8 372 aa8.46□□□□□ -1.06
SKA2-201ENST00000330137 APOL1O14791 398 aa8.45□□□□□ -1.06
SKA2-201ENST00000330137 VNN1O95497 513 aa8.45□□□□□ -1.06
SKA2-201ENST00000330137 ALBP02768 609 aa8.45□□□□□ -1.06
SKA2-201ENST00000330137 HOXD10P28358 340 aa8.45□□□□□ -1.06
SKA2-201ENST00000330137 NPTX2P47972 431 aa8.45□□□□□ -1.06
SKA2-201ENST00000330137 SLC26A2P50443 739 aa8.45□□□□□ -1.06
SKA2-201ENST00000330137 CSRP3P50461 194 aa8.45□□□□□ -1.06
SKA2-201ENST00000330137 BNC1Q01954 994 aa8.45□□□□□ -1.06
SKA2-201ENST00000330137 VAC14Q08AM6 782 aa8.45□□□□□ -1.06
SKA2-201ENST00000330137 GALNT1Q10472 559 aaPredicted RBP8.45□□□□□ -1.06
SKA2-201ENST00000330137 LAMC2Q13753 1193 aa8.45□□□□□ -1.06
SKA2-201ENST00000330137 KIZQ2M2Z5 673 aa8.45□□□□□ -1.06
SKA2-201ENST00000330137 PGS1Q32NB8 556 aa8.45□□□□□ -1.06
SKA2-201ENST00000330137 GLRA4Q5JXX5 417 aa8.45□□□□□ -1.06
SKA2-201ENST00000330137 TTC23Q5W5X9 447 aa8.45□□□□□ -1.06
SKA2-201ENST00000330137 SLFN12LQ6IEE8 588 aa8.45□□□□□ -1.06
SKA2-201ENST00000330137 SLC39A4Q6P5W5 647 aa8.45□□□□□ -1.06
SKA2-201ENST00000330137 THAP5Q7Z6K1 395 aa8.45□□□□□ -1.06
SKA2-201ENST00000330137 DDIASQ8IXT1 998 aa8.45□□□□□ -1.06
SKA2-201ENST00000330137 CCDC24Q8N4L8 307 aa8.45□□□□□ -1.06
SKA2-201ENST00000330137 MINDY1Q8N5J2 469 aa8.45□□□□□ -1.06
SKA2-201ENST00000330137 PLD5Q8N7P1 536 aa8.45□□□□□ -1.06
SKA2-201ENST00000330137 EMILIN2Q9BXX0 1053 aa8.45□□□□□ -1.06
SKA2-201ENST00000330137 TRIT1Q9H3H1 467 aaKnown RBP8.45□□□□□ -1.06
SKA2-201ENST00000330137 EPS8L2Q9H6S3 715 aa8.45□□□□□ -1.06
SKA2-201ENST00000330137 KMT5AQ9NQR1 393 aa8.45□□□□□ -1.06
SKA2-201ENST00000330137 NSMCE4AQ9NXX6 385 aa8.45□□□□□ -1.06
SKA2-201ENST00000330137 PI4KBQ9UBF8 816 aa8.45□□□□□ -1.06
SKA2-201ENST00000330137 ZNF221Q9UK13 617 aa8.45□□□□□ -1.06
SKA2-201ENST00000330137 SLC27A5Q9Y2P5 690 aa8.45□□□□□ -1.06
SKA2-201ENST00000330137 N6AMT1Q9Y5N5 214 aa8.45□□□□□ -1.06
SKA2-201ENST00000330137 TEX51A0A1B0GUA7 166 aa8.45□□□□□ -1.06
SKA2-201ENST00000330137 MTSS1O43312 755 aa8.45□□□□□ -1.06
SKA2-201ENST00000330137 NRP2O60462 931 aa8.45□□□□□ -1.06
SKA2-201ENST00000330137 SYNCRIPO60506 623 aaKnown RBP8.45□□□□□ -1.06
SKA2-201ENST00000330137 CALCAP01258 141 aa8.45□□□□□ -1.06
SKA2-201ENST00000330137 PRKACBP22694 351 aa8.45□□□□□ -1.06
SKA2-201ENST00000330137 MIPP30301 263 aa8.45□□□□□ -1.06
SKA2-201ENST00000330137 YWHABP31946 246 aaKnown RBP8.45□□□□□ -1.06
SKA2-201ENST00000330137 IFNA8P32881 189 aa8.45□□□□□ -1.06
SKA2-201ENST00000330137 RFC2P35250 354 aa8.45□□□□□ -1.06
SKA2-201ENST00000330137 EIF2DP41214 584 aaKnown RBP8.45□□□□□ -1.06
SKA2-201ENST00000330137 EIF6P56537 245 aaKnown RBP8.45□□□□□ -1.06
SKA2-201ENST00000330137 CCDC58Q4VC31 144 aa8.45□□□□□ -1.06
SKA2-201ENST00000330137 LRRC8EQ6NSJ5 796 aa8.45□□□□□ -1.06
SKA2-201ENST00000330137 SYCE2Q6PIF2 218 aa8.45□□□□□ -1.06
SKA2-201ENST00000330137 EXOC8Q8IYI6 725 aa8.45□□□□□ -1.06
SKA2-201ENST00000330137 LSMEM1Q8N8F7 131 aa8.45□□□□□ -1.06
SKA2-201ENST00000330137 KIAA1958Q8N8K9 716 aa8.45□□□□□ -1.06
SKA2-201ENST00000330137 RDM1Q8NG50 284 aa8.45□□□□□ -1.06
SKA2-201ENST00000330137 OR7A2PQ8NGA2 310 aa8.45□□□□□ -1.06
SKA2-201ENST00000330137 ZNF566Q969W8 418 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms