RNA–Protein interactions for RNA: ENST00000329970.7

GTF3C6-201, Transcript of general transcription factor IIIC subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C6, Length 952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C6-201ENST00000329970 DNAAF5Q86Y56 855 aa13.75□□□□□ -0.21
GTF3C6-201ENST00000329970 HAUS4Q9H6D7 363 aa13.75□□□□□ -0.21
GTF3C6-201ENST00000329970 EVA1BQ9NVM1 165 aa13.75□□□□□ -0.21
GTF3C6-201ENST00000329970 UCKL1Q9NWZ5 548 aa13.75□□□□□ -0.21
GTF3C6-201ENST00000329970 LHX3Q9UBR4 397 aa13.75□□□□□ -0.21
GTF3C6-201ENST00000329970 LHX6Q9UPM6 363 aa13.75□□□□□ -0.21
GTF3C6-201ENST00000329970 AP4E1Q9UPM8 1137 aa13.75□□□□□ -0.21
GTF3C6-201ENST00000329970 A0A087WV48 116 aa13.74□□□□□ -0.21
GTF3C6-201ENST00000329970 H3BM21 787 aa13.74□□□□□ -0.21
GTF3C6-201ENST00000329970 NEMP1O14524 444 aa13.74□□□□□ -0.21
GTF3C6-201ENST00000329970 TPP1O14773 563 aa13.74□□□□□ -0.21
GTF3C6-201ENST00000329970 LZTS3O60299 673 aaPredicted RBP13.74□□□□□ -0.21
GTF3C6-201ENST00000329970 PRAMEF11O60813 436 aa13.74□□□□□ -0.21
GTF3C6-201ENST00000329970 TM7SF2O76062 418 aa13.74□□□□□ -0.21
GTF3C6-201ENST00000329970 RNF8O76064 485 aa13.74□□□□□ -0.21
GTF3C6-201ENST00000329970 MYBL1P10243 752 aa13.74□□□□□ -0.21
GTF3C6-201ENST00000329970 PSMA2P25787 234 aa13.74□□□□□ -0.21
GTF3C6-201ENST00000329970 HCAR3P49019 387 aa13.74□□□□□ -0.21
GTF3C6-201ENST00000329970 DUSP3P51452 185 aaPredicted RBP13.74□□□□□ -0.21
GTF3C6-201ENST00000329970 YPEL5P62699 121 aa13.74□□□□□ -0.21
GTF3C6-201ENST00000329970 INSM1Q01101 510 aaPredicted RBP13.74□□□□□ -0.21
GTF3C6-201ENST00000329970 ELP6Q0PNE2 266 aa13.74□□□□□ -0.21
GTF3C6-201ENST00000329970 PTK2BQ14289 1009 aa13.74□□□□□ -0.21
GTF3C6-201ENST00000329970 ACAP1Q15027 740 aa13.74□□□□□ -0.21
GTF3C6-201ENST00000329970 IQCB1Q15051 598 aa13.74□□□□□ -0.21
GTF3C6-201ENST00000329970 AGERQ15109 404 aa13.74□□□□□ -0.21
GTF3C6-201ENST00000329970 CYTH1Q15438 398 aa13.74□□□□□ -0.21
GTF3C6-201ENST00000329970 TMEM52BQ4KMG9 183 aa13.74□□□□□ -0.21
GTF3C6-201ENST00000329970 AFMIDQ63HM1 303 aa13.74□□□□□ -0.21
GTF3C6-201ENST00000329970 ZNF571Q7Z3V5 609 aaPredicted RBP13.74□□□□□ -0.21
GTF3C6-201ENST00000329970 TTC7BQ86TV6 843 aa13.74□□□□□ -0.21
GTF3C6-201ENST00000329970 MARCH9Q86YJ5 346 aa13.74□□□□□ -0.21
GTF3C6-201ENST00000329970 ARFGAP1Q8N6T3 406 aa13.74□□□□□ -0.21
GTF3C6-201ENST00000329970 DCBLD1Q8N8Z6 715 aa13.74□□□□□ -0.21
GTF3C6-201ENST00000329970 BTN2A2Q8WVV5 523 aa13.74□□□□□ -0.21
GTF3C6-201ENST00000329970 TRIM11Q96F44 468 aa13.74□□□□□ -0.21
GTF3C6-201ENST00000329970 ZNF641Q96N77 438 aaPredicted RBP13.74□□□□□ -0.21
GTF3C6-201ENST00000329970 TUBGCP5Q96RT8 1024 aa13.74□□□□□ -0.21
GTF3C6-201ENST00000329970 SNRNP25Q9BV90 132 aaKnown RBP13.74□□□□□ -0.21
GTF3C6-201ENST00000329970 C1QTNF7Q9BXJ2 289 aa13.74□□□□□ -0.21
GTF3C6-201ENST00000329970 NCKIPSDQ9NZQ3 722 aa13.74□□□□□ -0.21
GTF3C6-201ENST00000329970 UBA2Q9UBT2 640 aaPredicted RBP13.74□□□□□ -0.21
GTF3C6-201ENST00000329970 GGT7Q9UJ14 662 aa13.74□□□□□ -0.21
GTF3C6-201ENST00000329970 ITM2BQ9Y287 266 aa13.74□□□□□ -0.21
GTF3C6-201ENST00000329970 SCINQ9Y6U3 715 aa13.74□□□□□ -0.21
GTF3C6-201ENST00000329970 NBEAQ8NFP9 2946 aa13.74□□□□□ -0.21
GTF3C6-201ENST00000329970 SHROOM3Q8TF72 1996 aa13.74□□□□□ -0.21
GTF3C6-201ENST00000329970 ARHGAP42A6NI28 874 aa13.73□□□□□ -0.21
GTF3C6-201ENST00000329970 EEF2KO00418 725 aaKnown RBP13.73□□□□□ -0.21
GTF3C6-201ENST00000329970 DDX3XO00571 662 aaKnown RBP eCLIP13.73□□□□□ -0.214e-18■□□□□ 9.2
GTF3C6-201ENST00000329970 TIMP2P16035 220 aa13.73□□□□□ -0.21
GTF3C6-201ENST00000329970 IGFALSP35858 605 aa13.73□□□□□ -0.21
GTF3C6-201ENST00000329970 DAB2P98082 770 aa13.73□□□□□ -0.21
GTF3C6-201ENST00000329970 TARDBPQ13148 414 aaKnown RBP eCLIP13.73□□□□□ -0.21
GTF3C6-201ENST00000329970 PDE1CQ14123 709 aaPredicted RBP13.73□□□□□ -0.21
GTF3C6-201ENST00000329970 RFTN1Q14699 578 aaPredicted RBP13.73□□□□□ -0.21
GTF3C6-201ENST00000329970 NR1I3Q14994 352 aa13.73□□□□□ -0.21
GTF3C6-201ENST00000329970 E4F1Q66K89 784 aaPredicted RBP13.73□□□□□ -0.21
GTF3C6-201ENST00000329970 ZCCHC8Q6NZY4 707 aaKnown RBP13.73□□□□□ -0.21
GTF3C6-201ENST00000329970 BRAT1Q6PJG6 821 aa13.73□□□□□ -0.21
GTF3C6-201ENST00000329970 LEKR1Q6ZMV7 388 aa13.73□□□□□ -0.21
GTF3C6-201ENST00000329970 CYP4V2Q6ZWL3 525 aaPredicted RBP13.73□□□□□ -0.21
GTF3C6-201ENST00000329970 ZNF548Q8NEK5 533 aaPredicted RBP13.73□□□□□ -0.21
GTF3C6-201ENST00000329970 CXorf40AQ8TE69 158 aa13.73□□□□□ -0.21
GTF3C6-201ENST00000329970 APOLD1Q96LR9 279 aa13.73□□□□□ -0.21
GTF3C6-201ENST00000329970 PEBP4Q96S96 227 aa13.73□□□□□ -0.21
GTF3C6-201ENST00000329970 ISCUQ9H1K1 167 aa13.73□□□□□ -0.21
GTF3C6-201ENST00000329970 MRPL47Q9HD33 250 aaKnown RBP13.73□□□□□ -0.21
GTF3C6-201ENST00000329970 DNAJC28Q9NX36 388 aa13.73□□□□□ -0.21
GTF3C6-201ENST00000329970 CLCA2Q9UQC9 943 aa13.73□□□□□ -0.21
GTF3C6-201ENST00000329970 RAXQ9Y2V3 346 aa13.73□□□□□ -0.21
GTF3C6-201ENST00000329970 PTPRQQ9UMZ3 2332 aa13.72□□□□□ -0.21
GTF3C6-201ENST00000329970 LY6G6EA0A0G2JKS1 128 aa13.72□□□□□ -0.21
GTF3C6-201ENST00000329970 A0A1W2PQJ5 194 aa13.72□□□□□ -0.21
GTF3C6-201ENST00000329970 CFAP69A5D8W1 941 aa13.72□□□□□ -0.21
GTF3C6-201ENST00000329970 K7ESM1 405 aa13.72□□□□□ -0.21
GTF3C6-201ENST00000329970 ATMINO43313 823 aaPredicted RBP13.72□□□□□ -0.21
GTF3C6-201ENST00000329970 PRPSAP2O60256 369 aa13.72□□□□□ -0.21
GTF3C6-201ENST00000329970 LRCH4O75427 683 aa13.72□□□□□ -0.21
GTF3C6-201ENST00000329970 FTLP02792 175 aaPredicted RBP13.72□□□□□ -0.21
GTF3C6-201ENST00000329970 MIPP30301 263 aa13.72□□□□□ -0.21
GTF3C6-201ENST00000329970 PCK1P35558 622 aa13.72□□□□□ -0.21
GTF3C6-201ENST00000329970 PEX5P50542 639 aa13.72□□□□□ -0.21
GTF3C6-201ENST00000329970 NSUN2Q08J23 767 aaKnown RBP eCLIP13.72□□□□□ -0.21
GTF3C6-201ENST00000329970 KLHL30Q0D2K2 578 aa13.72□□□□□ -0.21
GTF3C6-201ENST00000329970 CA9Q16790 459 aa13.72□□□□□ -0.21
GTF3C6-201ENST00000329970 CDCP2Q5VXM1 449 aa13.72□□□□□ -0.21
GTF3C6-201ENST00000329970 CAVIN1Q6NZI2 390 aaKnown RBP13.72□□□□□ -0.21
GTF3C6-201ENST00000329970 RFX8Q6ZV50 586 aa13.72□□□□□ -0.21
GTF3C6-201ENST00000329970 LZTR1Q8N653 840 aa13.72□□□□□ -0.21
GTF3C6-201ENST00000329970 TP53I13Q8NBR0 393 aaPredicted RBP13.72□□□□□ -0.21
GTF3C6-201ENST00000329970 SYN2Q92777 582 aaPredicted RBP13.72□□□□□ -0.21
GTF3C6-201ENST00000329970 IQCDQ96DY2 449 aa13.72□□□□□ -0.21
GTF3C6-201ENST00000329970 NAP1L5Q96NT1 182 aaPredicted RBP13.72□□□□□ -0.21
GTF3C6-201ENST00000329970 KCTD15Q96SI1 283 aaPredicted RBP13.72□□□□□ -0.21
GTF3C6-201ENST00000329970 SLC39A8Q9C0K1 460 aa13.72□□□□□ -0.21
GTF3C6-201ENST00000329970 SUV39H2Q9H5I1 410 aa13.72□□□□□ -0.21
GTF3C6-201ENST00000329970 DHX35Q9H5Z1 703 aaKnown RBP13.72□□□□□ -0.21
GTF3C6-201ENST00000329970 CNOT8Q9UFF9 292 aaKnown RBP13.72□□□□□ -0.21
GTF3C6-201ENST00000329970 IPO11Q9UI26 975 aaKnown RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms