RNA–Protein interactions for RNA: ENST00000328796.4

CLDN6-201, Transcript of claudin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN6, Length 1,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6-201ENST00000328796 SEMA4GQ9NTN9 838 aa17.03■□□□□ 0.32
CLDN6-201ENST00000328796 SAE1Q9UBE0 346 aaPredicted RBP17.03■□□□□ 0.32
CLDN6-201ENST00000328796 TPX2Q9ULW0 747 aaKnown RBP17.03■□□□□ 0.32
CLDN6-201ENST00000328796 TBC1D3DA0A087WVF3 549 aa17.02■□□□□ 0.32
CLDN6-201ENST00000328796 TBC1D3IA0A087WXS9 549 aa17.02■□□□□ 0.32
CLDN6-201ENST00000328796 TBC1D3EA0A087X179 549 aa17.02■□□□□ 0.32
CLDN6-201ENST00000328796 TBC1D3KA0A087X1G2 549 aa17.02■□□□□ 0.32
CLDN6-201ENST00000328796 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.02■□□□□ 0.32
CLDN6-201ENST00000328796 TBC1D3FA6NER0 549 aaPredicted RBP17.02■□□□□ 0.32
CLDN6-201ENST00000328796 TBC1D3LB9A6J9 549 aa17.02■□□□□ 0.32
CLDN6-201ENST00000328796 APOC4-APOC2K7ER74 178 aa17.02■□□□□ 0.32
CLDN6-201ENST00000328796 LATO43561 262 aa17.02■□□□□ 0.32
CLDN6-201ENST00000328796 AP1G1O43747 822 aa17.02■□□□□ 0.32
CLDN6-201ENST00000328796 GJB3O75712 270 aa17.02■□□□□ 0.32
CLDN6-201ENST00000328796 FSBPO95073 299 aa17.02■□□□□ 0.32
CLDN6-201ENST00000328796 APOC2P02655 101 aa17.02■□□□□ 0.32
CLDN6-201ENST00000328796 TBC1D3HP0C7X1 549 aa17.02■□□□□ 0.32
CLDN6-201ENST00000328796 MAOBP27338 520 aa17.02■□□□□ 0.32
CLDN6-201ENST00000328796 ABL2P42684 1182 aa17.02■□□□□ 0.32
CLDN6-201ENST00000328796 PPP2CBP62714 309 aa17.02■□□□□ 0.32
CLDN6-201ENST00000328796 PPP2CAP67775 309 aa17.02■□□□□ 0.32
CLDN6-201ENST00000328796 PRKD1Q15139 912 aaPredicted RBP17.02■□□□□ 0.32
CLDN6-201ENST00000328796 CCDC6Q16204 474 aa17.02■□□□□ 0.32
CLDN6-201ENST00000328796 MEI1Q5TIA1 1274 aa17.02■□□□□ 0.32
CLDN6-201ENST00000328796 TBC1D3GQ6DHY5 549 aa17.02■□□□□ 0.32
CLDN6-201ENST00000328796 TBC1D3CQ6IPX1 549 aa17.02■□□□□ 0.32
CLDN6-201ENST00000328796 AADACL2Q6P093 401 aa17.02■□□□□ 0.32
CLDN6-201ENST00000328796 NEK5Q6P3R8 708 aa17.02■□□□□ 0.32
CLDN6-201ENST00000328796 FBXL19Q6PCT2 694 aa17.02■□□□□ 0.32
CLDN6-201ENST00000328796 TRIM69Q86WT6 500 aa17.02■□□□□ 0.32
CLDN6-201ENST00000328796 CAMK1DQ8IU85 385 aa17.02■□□□□ 0.32
CLDN6-201ENST00000328796 RGL4Q8IZJ4 473 aa17.02■□□□□ 0.32
CLDN6-201ENST00000328796 TBC1D3Q8IZP1 549 aaPredicted RBP17.02■□□□□ 0.32
CLDN6-201ENST00000328796 P3H4Q92791 437 aa17.02■□□□□ 0.32
CLDN6-201ENST00000328796 RAB7BQ96AH8 199 aa17.02■□□□□ 0.32
CLDN6-201ENST00000328796 ALS2CR12Q96Q35 445 aa17.02■□□□□ 0.32
CLDN6-201ENST00000328796 ATXN2Q99700 1313 aaKnown RBP17.02■□□□□ 0.32
CLDN6-201ENST00000328796 EIF2B4Q9UI10 523 aaKnown RBP17.02■□□□□ 0.32
CLDN6-201ENST00000328796 FADS3Q9Y5Q0 445 aa17.02■□□□□ 0.32
CLDN6-201ENST00000328796 PLXNA2O75051 1894 aa17.02■□□□□ 0.31
CLDN6-201ENST00000328796 SPTBN4Q9H254 2564 aa17.02■□□□□ 0.31
CLDN6-201ENST00000328796 KCNK1O00180 336 aa17.02■□□□□ 0.31
CLDN6-201ENST00000328796 AREL1O15033 823 aa17.02■□□□□ 0.31
CLDN6-201ENST00000328796 SPINT1O43278 529 aa17.02■□□□□ 0.31
CLDN6-201ENST00000328796 CD27P26842 260 aa17.02■□□□□ 0.31
CLDN6-201ENST00000328796 SERPINA4P29622 427 aa17.02■□□□□ 0.31
CLDN6-201ENST00000328796 MAXP61244 160 aa17.02■□□□□ 0.31
CLDN6-201ENST00000328796 AP1B1Q10567 949 aa17.02■□□□□ 0.31
CLDN6-201ENST00000328796 RABEPKQ7Z6M1 372 aa17.02■□□□□ 0.31
CLDN6-201ENST00000328796 TRIM58Q8NG06 486 aa17.02■□□□□ 0.31
CLDN6-201ENST00000328796 CEP76Q8TAP6 659 aa17.02■□□□□ 0.31
CLDN6-201ENST00000328796 SPOCK2Q92563 424 aa17.02■□□□□ 0.31
CLDN6-201ENST00000328796 ECHDC3Q96DC8 303 aa17.02■□□□□ 0.31
CLDN6-201ENST00000328796 POLR1EQ9GZS1 481 aaKnown RBP17.02■□□□□ 0.31
CLDN6-201ENST00000328796 SMOC1Q9H4F8 434 aa17.02■□□□□ 0.31
CLDN6-201ENST00000328796 NOD2Q9HC29 1040 aa17.02■□□□□ 0.31
CLDN6-201ENST00000328796 SCUBE2Q9NQ36 999 aa17.02■□□□□ 0.31
CLDN6-201ENST00000328796 RBM22Q9NW64 420 aaKnown RBP eCLIP17.02■□□□□ 0.31
CLDN6-201ENST00000328796 SUSD2Q9UGT4 822 aa17.02■□□□□ 0.31
CLDN6-201ENST00000328796 ATP8A1Q9Y2Q0 1164 aa17.02■□□□□ 0.31
CLDN6-201ENST00000328796 A0A1W2PPC4 97 aa17.01■□□□□ 0.31
CLDN6-201ENST00000328796 TTC24A2A3L6 582 aaPredicted RBP17.01■□□□□ 0.31
CLDN6-201ENST00000328796 PATE3B3GLJ2 98 aa17.01■□□□□ 0.31
CLDN6-201ENST00000328796 TRAFD1O14545 582 aaPredicted RBP17.01■□□□□ 0.31
CLDN6-201ENST00000328796 FOXD2O60548 495 aaPredicted RBP17.01■□□□□ 0.31
CLDN6-201ENST00000328796 JCHAINP01591 159 aa17.01■□□□□ 0.31
CLDN6-201ENST00000328796 HLA-DQB2P05538 268 aa17.01■□□□□ 0.31
CLDN6-201ENST00000328796 TIMP2P16035 220 aa17.01■□□□□ 0.31
CLDN6-201ENST00000328796 CES1P23141 567 aa17.01■□□□□ 0.31
CLDN6-201ENST00000328796 SUOXP51687 545 aa17.01■□□□□ 0.31
CLDN6-201ENST00000328796 BCL2L1Q07817 233 aa17.01■□□□□ 0.31
CLDN6-201ENST00000328796 ZBTB17Q13105 803 aa17.01■□□□□ 0.31
CLDN6-201ENST00000328796 ZNF211Q13398 564 aaPredicted RBP17.01■□□□□ 0.31
CLDN6-201ENST00000328796 NOMO1Q15155 1222 aa17.01■□□□□ 0.31
CLDN6-201ENST00000328796 DUOXA1Q1HG43 343 aa17.01■□□□□ 0.31
CLDN6-201ENST00000328796 BRAT1Q6PJG6 821 aa17.01■□□□□ 0.31
CLDN6-201ENST00000328796 REXO1L1PQ8IX06 675 aa17.01■□□□□ 0.31
CLDN6-201ENST00000328796 CNTD1Q8N815 330 aa17.01■□□□□ 0.31
CLDN6-201ENST00000328796 SNX19Q92543 992 aa17.01■□□□□ 0.31
CLDN6-201ENST00000328796 HAUS1Q96CS2 278 aa17.01■□□□□ 0.31
CLDN6-201ENST00000328796 EBF2Q9HAK2 575 aa17.01■□□□□ 0.31
CLDN6-201ENST00000328796 HAUS2Q9NVX0 235 aa17.01■□□□□ 0.31
CLDN6-201ENST00000328796 PCDH15Q96QU1 1955 aa17■□□□□ 0.31
CLDN6-201ENST00000328796 LAMA1P25391 3075 aa17■□□□□ 0.31
CLDN6-201ENST00000328796 A0A1B0GTW7 788 aa17■□□□□ 0.31
CLDN6-201ENST00000328796 HACD1B0YJ81 288 aa17■□□□□ 0.31
CLDN6-201ENST00000328796 HTRA2O43464 458 aaPredicted RBP17■□□□□ 0.31
CLDN6-201ENST00000328796 TSPAN6O43657 245 aa17■□□□□ 0.31
CLDN6-201ENST00000328796 RNGTTO60942 597 aaKnown RBP17■□□□□ 0.31
CLDN6-201ENST00000328796 SOCS5O75159 536 aa17■□□□□ 0.31
CLDN6-201ENST00000328796 TJP3O95049 919 aa17■□□□□ 0.31
CLDN6-201ENST00000328796 NUDT1P36639 197 aa17■□□□□ 0.31
CLDN6-201ENST00000328796 CCDC173Q0VFZ6 552 aa17■□□□□ 0.31
CLDN6-201ENST00000328796 XRCC4Q13426 336 aa17■□□□□ 0.31
CLDN6-201ENST00000328796 SF3A2Q15428 464 aaKnown RBP17■□□□□ 0.31
CLDN6-201ENST00000328796 TMEM259Q4ZIN3 620 aa17■□□□□ 0.31
CLDN6-201ENST00000328796 SLC23A3Q6PIS1 610 aa17■□□□□ 0.31
CLDN6-201ENST00000328796 PRR23CQ6ZRP0 262 aa17■□□□□ 0.31
CLDN6-201ENST00000328796 TTC7BQ86TV6 843 aa17■□□□□ 0.31
CLDN6-201ENST00000328796 HORMAD1Q86X24 394 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms