RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 FGF1P05230 155 aa10.35□□□□□ -0.75
VIPAS39-201ENST00000327028 ATXN1LP0C7T5 689 aaKnown RBP10.35□□□□□ -0.75
VIPAS39-201ENST00000327028 HLA-DPA1P20036 260 aa10.35□□□□□ -0.75
VIPAS39-201ENST00000327028 RECQLP46063 649 aaPredicted RBP10.35□□□□□ -0.75
VIPAS39-201ENST00000327028 NPY2RP49146 381 aa10.35□□□□□ -0.75
VIPAS39-201ENST00000327028 CCNHP51946 323 aaPredicted RBP10.35□□□□□ -0.75
VIPAS39-201ENST00000327028 TRAF2Q12933 501 aa10.35□□□□□ -0.75
VIPAS39-201ENST00000327028 MTM1Q13496 603 aa10.35□□□□□ -0.75
VIPAS39-201ENST00000327028 ZNF234Q14588 700 aa10.35□□□□□ -0.75
VIPAS39-201ENST00000327028 MYLK3Q32MK0 819 aa10.35□□□□□ -0.75
VIPAS39-201ENST00000327028 CCDC38Q502W7 563 aa10.35□□□□□ -0.75
VIPAS39-201ENST00000327028 RYBPQ8N488 228 aaPredicted RBP10.35□□□□□ -0.75
VIPAS39-201ENST00000327028 OR6K2Q8NGY2 324 aa10.35□□□□□ -0.75
VIPAS39-201ENST00000327028 SIGLEC10Q96LC7 697 aa10.35□□□□□ -0.75
VIPAS39-201ENST00000327028 TTC25Q96NG3 672 aa10.35□□□□□ -0.75
VIPAS39-201ENST00000327028 CPEB1Q9BZB8 566 aaKnown RBP10.35□□□□□ -0.75
VIPAS39-201ENST00000327028 ATP13A3Q9H7F0 1226 aa10.35□□□□□ -0.75
VIPAS39-201ENST00000327028 FBRSL1Q9HCM7 1045 aaKnown RBP10.35□□□□□ -0.75
VIPAS39-201ENST00000327028 NINJ2Q9NZG7 142 aa10.35□□□□□ -0.75
VIPAS39-201ENST00000327028 BFARQ9NZS9 450 aa10.35□□□□□ -0.75
VIPAS39-201ENST00000327028 RAI2Q9Y5P3 530 aa10.35□□□□□ -0.75
VIPAS39-201ENST00000327028 TEX264Q9Y6I9 313 aa10.35□□□□□ -0.75
VIPAS39-201ENST00000327028 SDR42E2A6NKP2 422 aa10.34□□□□□ -0.75
VIPAS39-201ENST00000327028 NPC1O15118 1278 aa10.34□□□□□ -0.75
VIPAS39-201ENST00000327028 POP4O95707 220 aaKnown RBP10.34□□□□□ -0.75
VIPAS39-201ENST00000327028 NDST3O95803 873 aa10.34□□□□□ -0.75
VIPAS39-201ENST00000327028 CPP00450 1065 aa10.34□□□□□ -0.75
VIPAS39-201ENST00000327028 HNRNPLP14866 589 aaKnown RBP eCLIP10.34□□□□□ -0.75
VIPAS39-201ENST00000327028 MGAT1P26572 445 aa10.34□□□□□ -0.75
VIPAS39-201ENST00000327028 CHRNA4P43681 627 aa10.34□□□□□ -0.75
VIPAS39-201ENST00000327028 SESN2P58004 480 aaPredicted RBP10.34□□□□□ -0.75
VIPAS39-201ENST00000327028 BCL2L1Q07817 233 aa10.34□□□□□ -0.75
VIPAS39-201ENST00000327028 GRM3Q14832 879 aa10.34□□□□□ -0.75
VIPAS39-201ENST00000327028 SLC1A5Q15758 541 aa10.34□□□□□ -0.75
VIPAS39-201ENST00000327028 UAP1Q16222 522 aaPredicted RBP10.34□□□□□ -0.75
VIPAS39-201ENST00000327028 SIRPB2Q5JXA9 342 aa10.34□□□□□ -0.75
VIPAS39-201ENST00000327028 ARMC3Q5W041 872 aa10.34□□□□□ -0.75
VIPAS39-201ENST00000327028 DPY19L3Q6ZPD9 716 aa10.34□□□□□ -0.75
VIPAS39-201ENST00000327028 FBXO36Q8NEA4 188 aa10.34□□□□□ -0.75
VIPAS39-201ENST00000327028 OR2A12Q8NGT7 310 aa10.34□□□□□ -0.75
VIPAS39-201ENST00000327028 VOPP1Q96AW1 172 aa10.34□□□□□ -0.75
VIPAS39-201ENST00000327028 TMEM245Q9H330 911 aa10.34□□□□□ -0.75
VIPAS39-201ENST00000327028 PIH1D1Q9NWS0 290 aaKnown RBP10.34□□□□□ -0.75
VIPAS39-201ENST00000327028 HCN2Q9UL51 889 aa10.34□□□□□ -0.75
VIPAS39-201ENST00000327028 DUSP12Q9UNI6 340 aa10.34□□□□□ -0.75
VIPAS39-201ENST00000327028 CHMP2BQ9UQN3 213 aa10.34□□□□□ -0.75
VIPAS39-201ENST00000327028 EDDM13A0A1B0GTR0 161 aa10.34□□□□□ -0.75
VIPAS39-201ENST00000327028 FZD6O60353 706 aa10.34□□□□□ -0.75
VIPAS39-201ENST00000327028 TSHRP16473 764 aa10.34□□□□□ -0.75
VIPAS39-201ENST00000327028 SERPINA4P29622 427 aa10.34□□□□□ -0.75
VIPAS39-201ENST00000327028 HSD17B3P37058 310 aa10.34□□□□□ -0.75
VIPAS39-201ENST00000327028 ELK3P41970 407 aa10.34□□□□□ -0.75
VIPAS39-201ENST00000327028 RAD51Q06609 339 aa10.34□□□□□ -0.75
VIPAS39-201ENST00000327028 PON2Q15165 354 aa10.34□□□□□ -0.75
VIPAS39-201ENST00000327028 HNRNPA1L2Q32P51 320 aaKnown RBP10.34□□□□□ -0.75
VIPAS39-201ENST00000327028 TMEM196Q5HYL7 178 aa10.34□□□□□ -0.75
VIPAS39-201ENST00000327028 EGFLAMQ63HQ2 1017 aa10.34□□□□□ -0.75
VIPAS39-201ENST00000327028 KDELC2Q7Z4H8 507 aa10.34□□□□□ -0.75
VIPAS39-201ENST00000327028 ANKMY2Q8IV38 441 aa10.34□□□□□ -0.75
VIPAS39-201ENST00000327028 MPP5Q8N3R9 675 aa10.34□□□□□ -0.75
VIPAS39-201ENST00000327028 PYROXD1Q8WU10 500 aa10.34□□□□□ -0.75
VIPAS39-201ENST00000327028 EZH1Q92800 747 aaPredicted RBP10.34□□□□□ -0.75
VIPAS39-201ENST00000327028 C9orf72Q96LT7 481 aa10.34□□□□□ -0.75
VIPAS39-201ENST00000327028 IL22Q9GZX6 179 aa10.34□□□□□ -0.75
VIPAS39-201ENST00000327028 EPB41L4BQ9H329 900 aa10.34□□□□□ -0.75
VIPAS39-201ENST00000327028 PABPC3Q9H361 631 aaKnown RBP10.34□□□□□ -0.75
VIPAS39-201ENST00000327028 SEMA4AQ9H3S1 761 aa10.34□□□□□ -0.75
VIPAS39-201ENST00000327028 SYBUQ9NX95 663 aa10.34□□□□□ -0.75
VIPAS39-201ENST00000327028 PCDHGC4Q9Y5F7 938 aa10.34□□□□□ -0.75
VIPAS39-201ENST00000327028 TCF20Q9UGU0 1960 aaKnown RBP10.33□□□□□ -0.76
VIPAS39-201ENST00000327028 K7EQS6 105 aa10.33□□□□□ -0.76
VIPAS39-201ENST00000327028 TRAFD1O14545 582 aaPredicted RBP10.33□□□□□ -0.76
VIPAS39-201ENST00000327028 RIPK2O43353 540 aa10.33□□□□□ -0.76
VIPAS39-201ENST00000327028 HTRA2O43464 458 aaPredicted RBP10.33□□□□□ -0.76
VIPAS39-201ENST00000327028 BNIP3LO60238 219 aa10.33□□□□□ -0.76
VIPAS39-201ENST00000327028 PIGNO95427 931 aa10.33□□□□□ -0.76
VIPAS39-201ENST00000327028 TTC4O95801 387 aa10.33□□□□□ -0.76
VIPAS39-201ENST00000327028 PRLP01236 227 aa10.33□□□□□ -0.76
VIPAS39-201ENST00000327028 CHRM1P11229 460 aaPredicted RBP10.33□□□□□ -0.76
VIPAS39-201ENST00000327028 DRD1P21728 446 aa10.33□□□□□ -0.76
VIPAS39-201ENST00000327028 RPL26P61254 145 aaKnown RBP10.33□□□□□ -0.76
VIPAS39-201ENST00000327028 ENPP2Q13822 863 aa10.33□□□□□ -0.76
VIPAS39-201ENST00000327028 CASP8Q14790 479 aa10.33□□□□□ -0.76
VIPAS39-201ENST00000327028 CERCAMQ5T4B2 595 aa10.33□□□□□ -0.76
VIPAS39-201ENST00000327028 FSTL4Q6MZW2 842 aa10.33□□□□□ -0.76
VIPAS39-201ENST00000327028 SERPINA13PQ6UXR4 307 aa10.33□□□□□ -0.76
VIPAS39-201ENST00000327028 HDXQ7Z353 690 aa10.33□□□□□ -0.76
VIPAS39-201ENST00000327028 IGDCC3Q8IVU1 814 aa10.33□□□□□ -0.76
VIPAS39-201ENST00000327028 SLC25A41Q8N5S1 370 aa10.33□□□□□ -0.76
VIPAS39-201ENST00000327028 UBLCP1Q8WVY7 318 aaPredicted RBP10.33□□□□□ -0.76
VIPAS39-201ENST00000327028 PTPRN2Q92932 1015 aa10.33□□□□□ -0.76
VIPAS39-201ENST00000327028 STAMBPL1Q96FJ0 436 aa10.33□□□□□ -0.76
VIPAS39-201ENST00000327028 EBNA1BP2Q99848 306 aaKnown RBP10.33□□□□□ -0.76
VIPAS39-201ENST00000327028 HEPHQ9BQS7 1158 aa10.33□□□□□ -0.76
VIPAS39-201ENST00000327028 ADGRE3Q9BY15 652 aa10.33□□□□□ -0.76
VIPAS39-201ENST00000327028 ZDHHC6Q9H6R6 413 aa10.33□□□□□ -0.76
VIPAS39-201ENST00000327028 RPL26L1Q9UNX3 145 aaKnown RBP10.33□□□□□ -0.76
VIPAS39-201ENST00000327028 CHKBQ9Y259 395 aa10.33□□□□□ -0.76
VIPAS39-201ENST00000327028 F5P12259 2224 aa10.33□□□□□ -0.76
VIPAS39-201ENST00000327028 C19orf67A6NJJ6 358 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms