RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 SCNN1AP37088 669 aa13.01□□□□□ -0.33
HMGCS1-201ENST00000325110 GRIA3P42263 894 aa13.01□□□□□ -0.33
HMGCS1-201ENST00000325110 SLC7A2P52569 658 aa13.01□□□□□ -0.33
HMGCS1-201ENST00000325110 WNT3AP56704 352 aa13.01□□□□□ -0.33
HMGCS1-201ENST00000325110 CDC42EP1Q00587 391 aa13.01□□□□□ -0.33
HMGCS1-201ENST00000325110 C9orf131Q5VYM1 1079 aa13.01□□□□□ -0.33
HMGCS1-201ENST00000325110 ZBTB46Q86UZ6 589 aa13.01□□□□□ -0.33
HMGCS1-201ENST00000325110 CATSPER1Q8NEC5 780 aa13.01□□□□□ -0.33
HMGCS1-201ENST00000325110 ZMIZ2Q8NF64 920 aa13.01□□□□□ -0.33
HMGCS1-201ENST00000325110 LPGAT1Q92604 370 aa13.01□□□□□ -0.33
HMGCS1-201ENST00000325110 VAT1Q99536 393 aa13.01□□□□□ -0.33
HMGCS1-201ENST00000325110 EFHD1Q9BUP0 239 aa13.01□□□□□ -0.33
HMGCS1-201ENST00000325110 SLC39A8Q9C0K1 460 aa13.01□□□□□ -0.33
HMGCS1-201ENST00000325110 KCNH4Q9UQ05 1017 aa13.01□□□□□ -0.33
HMGCS1-201ENST00000325110 MGAMO43451 1857 aa13□□□□□ -0.33
HMGCS1-201ENST00000325110 SLCO1B7G3V0H7 640 aa13□□□□□ -0.33
HMGCS1-201ENST00000325110 TSPAN3O60637 253 aa13□□□□□ -0.33
HMGCS1-201ENST00000325110 TNFAIP8O95379 198 aa13□□□□□ -0.33
HMGCS1-201ENST00000325110 ATP5F1P24539 256 aaPredicted RBP13□□□□□ -0.33
HMGCS1-201ENST00000325110 LRPAP1P30533 357 aa13□□□□□ -0.33
HMGCS1-201ENST00000325110 RPL5P46777 297 aaKnown RBP13□□□□□ -0.33
HMGCS1-201ENST00000325110 FUT11Q495W5 492 aa13□□□□□ -0.33
HMGCS1-201ENST00000325110 GPR158Q5T848 1215 aa13□□□□□ -0.33
HMGCS1-201ENST00000325110 MAMDC4Q6UXC1 1216 aa13□□□□□ -0.33
HMGCS1-201ENST00000325110 CUZD1Q86UP6 607 aa13□□□□□ -0.33
HMGCS1-201ENST00000325110 SMG8Q8ND04 991 aaKnown RBP13□□□□□ -0.33
HMGCS1-201ENST00000325110 NOL11Q9H8H0 719 aaKnown RBP13□□□□□ -0.33
HMGCS1-201ENST00000325110 RHBDL2Q9NX52 303 aa13□□□□□ -0.33
HMGCS1-201ENST00000325110 SMIM35A0A1B0GVV1 85 aa13□□□□□ -0.33
HMGCS1-201ENST00000325110 STRNO43815 780 aa13□□□□□ -0.33
HMGCS1-201ENST00000325110 RNASEH2AO75792 299 aaKnown RBP13□□□□□ -0.33
HMGCS1-201ENST00000325110 HLA-DQB2P05538 268 aa13□□□□□ -0.33
HMGCS1-201ENST00000325110 GALNT2Q10471 571 aa13□□□□□ -0.33
HMGCS1-201ENST00000325110 SCIMPQ6UWF3 145 aa13□□□□□ -0.33
HMGCS1-201ENST00000325110 ZBTB49Q6ZSB9 765 aa13□□□□□ -0.33
HMGCS1-201ENST00000325110 PIWIL4Q7Z3Z4 852 aaKnown RBP13□□□□□ -0.33
HMGCS1-201ENST00000325110 ADGRG6Q86SQ4 1221 aa13□□□□□ -0.33
HMGCS1-201ENST00000325110 SPATA2LQ8IUW3 424 aaPredicted RBP13□□□□□ -0.33
HMGCS1-201ENST00000325110 STYXQ8WUJ0 223 aa13□□□□□ -0.33
HMGCS1-201ENST00000325110 IFT43Q96FT9 208 aa13□□□□□ -0.33
HMGCS1-201ENST00000325110 KLHL32Q96NJ5 620 aa13□□□□□ -0.33
HMGCS1-201ENST00000325110 TMEM209Q96SK2 561 aa13□□□□□ -0.33
HMGCS1-201ENST00000325110 CATSPERBQ9H7T0 1116 aa13□□□□□ -0.33
HMGCS1-201ENST00000325110 SARS2Q9NP81 518 aaKnown RBP13□□□□□ -0.33
HMGCS1-201ENST00000325110 UBAP1Q9NZ09 502 aa13□□□□□ -0.33
HMGCS1-201ENST00000325110 GMPR2Q9P2T1 348 aaKnown RBP13□□□□□ -0.33
HMGCS1-201ENST00000325110 ST3GAL5Q9UNP4 418 aa13□□□□□ -0.33
HMGCS1-201ENST00000325110 KCNA5P22460 613 aa13□□□□□ -0.33
HMGCS1-201ENST00000325110 DPP6P42658 865 aa13□□□□□ -0.33
HMGCS1-201ENST00000325110 TIGD5Q53EQ6 642 aa13□□□□□ -0.33
HMGCS1-201ENST00000325110 GNASQ5JWF2 1037 aa13□□□□□ -0.33
HMGCS1-201ENST00000325110 ZFP1Q6P2D0 407 aa13□□□□□ -0.33
HMGCS1-201ENST00000325110 PIM3Q86V86 326 aa13□□□□□ -0.33
HMGCS1-201ENST00000325110 LILRA2Q8N149 483 aa13□□□□□ -0.33
HMGCS1-201ENST00000325110 C3orf58Q8NDZ4 430 aa13□□□□□ -0.33
HMGCS1-201ENST00000325110 GABPB2Q8TAK5 448 aaPredicted RBP13□□□□□ -0.33
HMGCS1-201ENST00000325110 TUBGCP3Q96CW5 907 aa13□□□□□ -0.33
HMGCS1-201ENST00000325110 SLC2A13Q96QE2 648 aa13□□□□□ -0.33
HMGCS1-201ENST00000325110 FAM124BQ9H5Z6 455 aaPredicted RBP13□□□□□ -0.33
HMGCS1-201ENST00000325110 EML4Q9HC35 981 aaKnown RBP13□□□□□ -0.33
HMGCS1-201ENST00000325110 SPON1Q9HCB6 807 aa13□□□□□ -0.33
HMGCS1-201ENST00000325110 ZBTB26Q9HCK0 441 aa13□□□□□ -0.33
HMGCS1-201ENST00000325110 IRAK4Q9NWZ3 460 aa13□□□□□ -0.33
HMGCS1-201ENST00000325110 BTRCQ9Y297 605 aa13□□□□□ -0.33
HMGCS1-201ENST00000325110 COMMD3-BMI1R4GMX3 469 aa13□□□□□ -0.33
HMGCS1-201ENST00000325110 TRIM38O00635 465 aa12.99□□□□□ -0.33
HMGCS1-201ENST00000325110 RTN3O95197 1032 aaPredicted RBP12.99□□□□□ -0.33
HMGCS1-201ENST00000325110 MT-ND1P03886 318 aa12.99□□□□□ -0.33
HMGCS1-201ENST00000325110 PRDX6P30041 224 aa12.99□□□□□ -0.33
HMGCS1-201ENST00000325110 TSPY1Q01534 308 aa12.99□□□□□ -0.33
HMGCS1-201ENST00000325110 PTPRCAPQ14761 206 aa12.99□□□□□ -0.33
HMGCS1-201ENST00000325110 IQSEC1Q6DN90 963 aa12.99□□□□□ -0.33
HMGCS1-201ENST00000325110 ARHGAP22Q7Z5H3 698 aa12.99□□□□□ -0.33
HMGCS1-201ENST00000325110 ZNF786Q8N393 782 aa12.99□□□□□ -0.33
HMGCS1-201ENST00000325110 SHCBP1Q8NEM2 672 aa12.99□□□□□ -0.33
HMGCS1-201ENST00000325110 HDAC10Q969S8 669 aa12.99□□□□□ -0.33
HMGCS1-201ENST00000325110 SLC45A3Q96JT2 553 aa12.99□□□□□ -0.33
HMGCS1-201ENST00000325110 CNDP1Q96KN2 507 aa12.99□□□□□ -0.33
HMGCS1-201ENST00000325110 MRPL57Q9BQC6 102 aaKnown RBP12.99□□□□□ -0.33
HMGCS1-201ENST00000325110 BRD8Q9H0E9 1235 aa12.99□□□□□ -0.33
HMGCS1-201ENST00000325110 COQ10BQ9H8M1 238 aa12.99□□□□□ -0.33
HMGCS1-201ENST00000325110 FAM105AQ9NUU6 356 aa12.99□□□□□ -0.33
HMGCS1-201ENST00000325110 SLC38A7Q9NVC3 462 aa12.99□□□□□ -0.33
HMGCS1-201ENST00000325110 PRG3Q9Y2Y8 225 aaPredicted RBP12.99□□□□□ -0.33
HMGCS1-201ENST00000325110 PTGDR2Q9Y5Y4 395 aa12.99□□□□□ -0.33
HMGCS1-201ENST00000325110 PSME4Q14997 1843 aa12.99□□□□□ -0.33
HMGCS1-201ENST00000325110 A0A1B0GTW7 788 aa12.99□□□□□ -0.33
HMGCS1-201ENST00000325110 HNRNPRO43390 633 aaKnown RBP12.99□□□□□ -0.33
HMGCS1-201ENST00000325110 TADA2AO75478 443 aa12.99□□□□□ -0.33
HMGCS1-201ENST00000325110 SPATA31D3P0C874 917 aa12.99□□□□□ -0.33
HMGCS1-201ENST00000325110 CDKL1Q00532 357 aa12.99□□□□□ -0.33
HMGCS1-201ENST00000325110 CAPRIN1Q14444 709 aaKnown RBP12.99□□□□□ -0.33
HMGCS1-201ENST00000325110 ZNF423Q2M1K9 1284 aa12.99□□□□□ -0.33
HMGCS1-201ENST00000325110 SPATA31D4Q6ZUB0 917 aa12.99□□□□□ -0.33
HMGCS1-201ENST00000325110 DCBLD1Q8N8Z6 715 aa12.99□□□□□ -0.33
HMGCS1-201ENST00000325110 NTAN1Q96AB6 310 aa12.99□□□□□ -0.33
HMGCS1-201ENST00000325110 BTBD9Q96Q07 612 aa12.99□□□□□ -0.33
HMGCS1-201ENST00000325110 LIN28AQ9H9Z2 209 aaKnown RBP12.99□□□□□ -0.33
HMGCS1-201ENST00000325110 MIOSQ9NXC5 875 aa12.99□□□□□ -0.33
HMGCS1-201ENST00000325110 TCAF1Q9Y4C2 921 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms