RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 THG1LQ9NWX6 298 aaKnown RBP12.92□□□□□ -0.34
DDX39A-202ENST00000324340 INTS6Q9UL03 887 aaKnown RBP12.92□□□□□ -0.34
DDX39A-202ENST00000324340 NOVA2Q9UNW9 492 aaKnown RBP12.92□□□□□ -0.34
DDX39A-202ENST00000324340 TEX264Q9Y6I9 313 aa12.92□□□□□ -0.34
DDX39A-202ENST00000324340 MYO18AQ92614 2054 aaKnown RBP12.91□□□□□ -0.34
DDX39A-202ENST00000324340 COL4A3Q01955 1670 aa12.91□□□□□ -0.34
DDX39A-202ENST00000324340 MUSKO15146 869 aa12.91□□□□□ -0.34
DDX39A-202ENST00000324340 SNAP91O60641 907 aa12.91□□□□□ -0.34
DDX39A-202ENST00000324340 NFATC1O95644 943 aa12.91□□□□□ -0.34
DDX39A-202ENST00000324340 ADH1CP00326 375 aa12.91□□□□□ -0.34
DDX39A-202ENST00000324340 MMP2P08253 660 aa12.91□□□□□ -0.34
DDX39A-202ENST00000324340 GSTA2P09210 222 aa12.91□□□□□ -0.34
DDX39A-202ENST00000324340 LINGO3P0C6S8 592 aa12.91□□□□□ -0.34
DDX39A-202ENST00000324340 TSHRP16473 764 aa12.91□□□□□ -0.34
DDX39A-202ENST00000324340 CR2P20023 1033 aa12.91□□□□□ -0.34
DDX39A-202ENST00000324340 CES1P23141 567 aa12.91□□□□□ -0.34
DDX39A-202ENST00000324340 ADRA1AP35348 466 aa12.91□□□□□ -0.34
DDX39A-202ENST00000324340 GRIA1P42261 906 aa12.91□□□□□ -0.34
DDX39A-202ENST00000324340 NIPAL4Q0D2K0 466 aa12.91□□□□□ -0.34
DDX39A-202ENST00000324340 BNIP1Q12981 228 aa12.91□□□□□ -0.34
DDX39A-202ENST00000324340 ZNF235Q14590 738 aa12.91□□□□□ -0.34
DDX39A-202ENST00000324340 PITRM1Q5JRX3 1037 aa12.91□□□□□ -0.34
DDX39A-202ENST00000324340 SPDYAQ5MJ70 313 aa12.91□□□□□ -0.34
DDX39A-202ENST00000324340 ASTLQ6HA08 431 aaPredicted RBP12.91□□□□□ -0.34
DDX39A-202ENST00000324340 NAPEPLDQ6IQ20 393 aa12.91□□□□□ -0.34
DDX39A-202ENST00000324340 RETSATQ6NUM9 610 aa12.91□□□□□ -0.34
DDX39A-202ENST00000324340 KDELC1Q6UW63 502 aa12.91□□□□□ -0.34
DDX39A-202ENST00000324340 LINC00523Q86TU6 105 aa12.91□□□□□ -0.34
DDX39A-202ENST00000324340 METTL3Q86U44 580 aaKnown RBP12.91□□□□□ -0.34
DDX39A-202ENST00000324340 ZBED8Q8IZ13 594 aa12.91□□□□□ -0.34
DDX39A-202ENST00000324340 AGGF1Q8N302 714 aaeCLIP12.91□□□□□ -0.34
DDX39A-202ENST00000324340 SPATA22Q8NHS9 363 aa12.91□□□□□ -0.34
DDX39A-202ENST00000324340 ATP2A3Q93084 1043 aa12.91□□□□□ -0.34
DDX39A-202ENST00000324340 TTC25Q96NG3 672 aa12.91□□□□□ -0.34
DDX39A-202ENST00000324340 TRAPPC9Q96Q05 1148 aa12.91□□□□□ -0.34
DDX39A-202ENST00000324340 CASS4Q9NQ75 786 aa12.91□□□□□ -0.34
DDX39A-202ENST00000324340 ABCB8Q9NUT2 735 aa12.91□□□□□ -0.34
DDX39A-202ENST00000324340 DNAJC17Q9NVM6 304 aaKnown RBP12.91□□□□□ -0.34
DDX39A-202ENST00000324340 NINJ2Q9NZG7 142 aa12.91□□□□□ -0.34
DDX39A-202ENST00000324340 EPS15L1Q9UBC2 864 aa12.91□□□□□ -0.34
DDX39A-202ENST00000324340 CD207Q9UJ71 328 aa12.91□□□□□ -0.34
DDX39A-202ENST00000324340 ACTL7AQ9Y615 435 aa12.91□□□□□ -0.34
DDX39A-202ENST00000324340 LAMA3Q16787 3333 aa12.91□□□□□ -0.34
DDX39A-202ENST00000324340 EME2A4GXA9 379 aaPredicted RBP12.9□□□□□ -0.34
DDX39A-202ENST00000324340 F5H423 210 aaPredicted RBP12.9□□□□□ -0.34
DDX39A-202ENST00000324340 AP3B1O00203 1094 aa12.9□□□□□ -0.34
DDX39A-202ENST00000324340 DIAPH2O60879 1101 aa12.9□□□□□ -0.34
DDX39A-202ENST00000324340 AVILO75366 819 aa12.9□□□□□ -0.34
DDX39A-202ENST00000324340 ECI2O75521 394 aa12.9□□□□□ -0.34
DDX39A-202ENST00000324340 MT-CYBP00156 380 aaPredicted RBP12.9□□□□□ -0.34
DDX39A-202ENST00000324340 ABHD2P08910 425 aa12.9□□□□□ -0.34
DDX39A-202ENST00000324340 ADH5P11766 374 aa12.9□□□□□ -0.34
DDX39A-202ENST00000324340 PABPC1P11940 636 aaKnown RBP12.9□□□□□ -0.34
DDX39A-202ENST00000324340 MAXP61244 160 aa12.9□□□□□ -0.34
DDX39A-202ENST00000324340 MAGOHP61326 146 aaKnown RBP12.9□□□□□ -0.34
DDX39A-202ENST00000324340 NCALDP61601 193 aa12.9□□□□□ -0.34
DDX39A-202ENST00000324340 DSC2Q02487 901 aa12.9□□□□□ -0.34
DDX39A-202ENST00000324340 NSUN2Q08J23 767 aaKnown RBP eCLIP12.9□□□□□ -0.34
DDX39A-202ENST00000324340 IHHQ14623 411 aa12.9□□□□□ -0.34
DDX39A-202ENST00000324340 FASTKD3Q14CZ7 662 aaKnown RBP12.9□□□□□ -0.34
DDX39A-202ENST00000324340 GAB4Q2WGN9 574 aa12.9□□□□□ -0.34
DDX39A-202ENST00000324340 KRT71Q3SY84 523 aa12.9□□□□□ -0.34
DDX39A-202ENST00000324340 FUT11Q495W5 492 aa12.9□□□□□ -0.34
DDX39A-202ENST00000324340 TRIM68Q6AZZ1 485 aa12.9□□□□□ -0.34
DDX39A-202ENST00000324340 GPR153Q6NV75 609 aa12.9□□□□□ -0.34
DDX39A-202ENST00000324340 ETFBKMTQ8IXQ9 262 aa12.9□□□□□ -0.34
DDX39A-202ENST00000324340 NAF1Q96HR8 494 aaKnown RBP12.9□□□□□ -0.34
DDX39A-202ENST00000324340 LRCH3Q96II8 777 aa12.9□□□□□ -0.34
DDX39A-202ENST00000324340 MRGPRX2Q96LB1 330 aa12.9□□□□□ -0.34
DDX39A-202ENST00000324340 SIGLEC10Q96LC7 697 aa12.9□□□□□ -0.34
DDX39A-202ENST00000324340 CINPQ9BW66 212 aaPredicted RBP12.9□□□□□ -0.34
DDX39A-202ENST00000324340 VCXQ9H320 206 aa12.9□□□□□ -0.34
DDX39A-202ENST00000324340 MYO9BQ13459 2157 aa12.89□□□□□ -0.35
DDX39A-202ENST00000324340 KIAA1549LQ6ZVL6 1849 aa12.89□□□□□ -0.35
DDX39A-202ENST00000324340 BANF1O75531 89 aa12.89□□□□□ -0.35
DDX39A-202ENST00000324340 TMCC1O94876 653 aa12.89□□□□□ -0.35
DDX39A-202ENST00000324340 LMNAP02545 664 aaKnown RBP12.89□□□□□ -0.35
DDX39A-202ENST00000324340 CISD3P0C7P0 127 aa12.89□□□□□ -0.35
DDX39A-202ENST00000324340 ARSAP15289 507 aa12.89□□□□□ -0.35
DDX39A-202ENST00000324340 PSMC3P17980 439 aa12.89□□□□□ -0.35
DDX39A-202ENST00000324340 ELK3P41970 407 aa12.89□□□□□ -0.35
DDX39A-202ENST00000324340 SERPINH1P50454 418 aaKnown RBP12.89□□□□□ -0.35
DDX39A-202ENST00000324340 SULT2A1Q06520 285 aa12.89□□□□□ -0.35
DDX39A-202ENST00000324340 SPARCL1Q14515 664 aa12.89□□□□□ -0.35
DDX39A-202ENST00000324340 SLC29A2Q14542 456 aa12.89□□□□□ -0.35
DDX39A-202ENST00000324340 KYNUQ16719 465 aa12.89□□□□□ -0.35
DDX39A-202ENST00000324340 BBS9Q3SYG4 887 aa12.89□□□□□ -0.35
DDX39A-202ENST00000324340 RALGPS1Q5JS13 557 aa12.89□□□□□ -0.35
DDX39A-202ENST00000324340 UBAP2Q5T6F2 1119 aaKnown RBP12.89□□□□□ -0.35
DDX39A-202ENST00000324340 ARMC3Q5W041 872 aa12.89□□□□□ -0.35
DDX39A-202ENST00000324340 DENND2CQ68D51 928 aa12.89□□□□□ -0.35
DDX39A-202ENST00000324340 PARM1Q6UWI2 310 aa12.89□□□□□ -0.35
DDX39A-202ENST00000324340 LINGO4Q6UY18 593 aa12.89□□□□□ -0.35
DDX39A-202ENST00000324340 RANBP10Q6VN20 620 aa12.89□□□□□ -0.35
DDX39A-202ENST00000324340 MTSS1LQ765P7 747 aa12.89□□□□□ -0.35
DDX39A-202ENST00000324340 ASRGL1Q7L266 308 aa12.89□□□□□ -0.35
DDX39A-202ENST00000324340 ADIPOR2Q86V24 386 aa12.89□□□□□ -0.35
DDX39A-202ENST00000324340 AHI1Q8N157 1196 aa12.89□□□□□ -0.35
DDX39A-202ENST00000324340 FBXO36Q8NEA4 188 aa12.89□□□□□ -0.35
DDX39A-202ENST00000324340 PYROXD1Q8WU10 500 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms