RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 PEAK1Q9H792 1746 aa11□□□□□ -0.65
SNRNP200-201ENST00000323853 CAB39LQ9H9S4 337 aa11□□□□□ -0.65
SNRNP200-201ENST00000323853 RPS6KA6Q9UK32 745 aa11□□□□□ -0.65
SNRNP200-201ENST00000323853 CABYRO75952 493 aa10.99□□□□□ -0.65
SNRNP200-201ENST00000323853 RECQL5O94762 991 aaPredicted RBP10.99□□□□□ -0.65
SNRNP200-201ENST00000323853 LINC00032P0C843 101 aa10.99□□□□□ -0.65
SNRNP200-201ENST00000323853 HGFP14210 728 aa10.99□□□□□ -0.65
SNRNP200-201ENST00000323853 ATP6V1C1P21283 382 aa10.99□□□□□ -0.65
SNRNP200-201ENST00000323853 ADARP55265 1226 aaKnown RBP10.99□□□□□ -0.65
SNRNP200-201ENST00000323853 FOLH1Q04609 750 aa10.99□□□□□ -0.65
SNRNP200-201ENST00000323853 INO80DQ53TQ3 878 aaPredicted RBP10.99□□□□□ -0.65
SNRNP200-201ENST00000323853 GPRIN3Q6ZVF9 776 aa10.99□□□□□ -0.65
SNRNP200-201ENST00000323853 HEATR4Q86WZ0 1026 aa10.99□□□□□ -0.65
SNRNP200-201ENST00000323853 NKX2-3Q8TAU0 364 aa10.99□□□□□ -0.65
SNRNP200-201ENST00000323853 BSNDQ8WZ55 320 aa10.99□□□□□ -0.65
SNRNP200-201ENST00000323853 ARL8BQ9NVJ2 186 aa10.99□□□□□ -0.65
SNRNP200-201ENST00000323853 PRPF19Q9UMS4 504 aaKnown RBP10.99□□□□□ -0.65
SNRNP200-201ENST00000323853 GSTT1P30711 240 aa10.99□□□□□ -0.65
SNRNP200-201ENST00000323853 MFSD5Q6N075 450 aa10.99□□□□□ -0.65
SNRNP200-201ENST00000323853 KRT73Q86Y46 540 aa10.99□□□□□ -0.65
SNRNP200-201ENST00000323853 PPTC7Q8NI37 304 aa10.99□□□□□ -0.65
SNRNP200-201ENST00000323853 HELQQ8TDG4 1101 aa10.99□□□□□ -0.65
SNRNP200-201ENST00000323853 ANKRD49Q8WVL7 239 aa10.99□□□□□ -0.65
SNRNP200-201ENST00000323853 SLC44A1Q8WWI5 657 aa10.99□□□□□ -0.65
SNRNP200-201ENST00000323853 XPR1Q9UBH6 696 aa10.99□□□□□ -0.65
SNRNP200-201ENST00000323853 MAPRE3Q9UPY8 281 aa10.99□□□□□ -0.65
SNRNP200-201ENST00000323853 GIT1Q9Y2X7 761 aa10.99□□□□□ -0.65
SNRNP200-201ENST00000323853 CAMTA1Q9Y6Y1 1673 aa10.99□□□□□ -0.65
SNRNP200-201ENST00000323853 HDAC3O15379 428 aa10.99□□□□□ -0.65
SNRNP200-201ENST00000323853 ACSM2AQ08AH3 577 aa10.99□□□□□ -0.65
SNRNP200-201ENST00000323853 TAF5Q15542 800 aa10.99□□□□□ -0.65
SNRNP200-201ENST00000323853 EML3Q32P44 896 aa10.99□□□□□ -0.65
SNRNP200-201ENST00000323853 PPP1R15BQ5SWA1 713 aa10.99□□□□□ -0.65
SNRNP200-201ENST00000323853 BROXQ5VW32 411 aa10.99□□□□□ -0.65
SNRNP200-201ENST00000323853 ACSM2BQ68CK6 577 aa10.99□□□□□ -0.65
SNRNP200-201ENST00000323853 ZNF544Q6NX49 715 aa10.99□□□□□ -0.65
SNRNP200-201ENST00000323853 FAM35AQ86V20 835 aa10.99□□□□□ -0.65
SNRNP200-201ENST00000323853 SLC39A8Q9C0K1 460 aa10.99□□□□□ -0.65
SNRNP200-201ENST00000323853 SLCO1B3Q9NPD5 702 aa10.99□□□□□ -0.65
SNRNP200-201ENST00000323853 AKAP12Q02952 1782 aa10.99□□□□□ -0.65
SNRNP200-201ENST00000323853 ALOX12P18054 663 aa10.99□□□□□ -0.65
SNRNP200-201ENST00000323853 SNRPD1P62314 119 aaKnown RBP10.99□□□□□ -0.65
SNRNP200-201ENST00000323853 EEF1DP3Q658K8 133 aa10.99□□□□□ -0.65
SNRNP200-201ENST00000323853 DSG4Q86SJ6 1040 aa10.99□□□□□ -0.65
SNRNP200-201ENST00000323853 C12orf50Q8NA57 414 aaPredicted RBP10.99□□□□□ -0.65
SNRNP200-201ENST00000323853 DEPDC7Q96QD5 511 aa10.99□□□□□ -0.65
SNRNP200-201ENST00000323853 ATAD3AQ9NVI7 634 aa10.99□□□□□ -0.65
SNRNP200-201ENST00000323853 PRKAG3Q9UGI9 489 aa10.99□□□□□ -0.65
SNRNP200-201ENST00000323853 TRAV19A0A0A6YYK7 116 aa10.99□□□□□ -0.65
SNRNP200-201ENST00000323853 IRF6O14896 467 aa10.99□□□□□ -0.65
SNRNP200-201ENST00000323853 NBNO60934 754 aa10.99□□□□□ -0.65
SNRNP200-201ENST00000323853 XYLBO75191 536 aa10.99□□□□□ -0.65
SNRNP200-201ENST00000323853 SH3BGRLO75368 114 aa10.99□□□□□ -0.65
SNRNP200-201ENST00000323853 CTBP1Q13363 440 aa10.99□□□□□ -0.65
SNRNP200-201ENST00000323853 SHROOM1Q2M3G4 852 aaPredicted RBP10.99□□□□□ -0.65
SNRNP200-201ENST00000323853 LACTB2Q53H82 288 aaPredicted RBP10.99□□□□□ -0.65
SNRNP200-201ENST00000323853 LRRC57Q8N9N7 239 aa10.99□□□□□ -0.65
SNRNP200-201ENST00000323853 TMEM39AQ9NV64 488 aa10.99□□□□□ -0.65
SNRNP200-201ENST00000323853 R3HDM2Q9Y2K5 976 aaKnown RBP10.99□□□□□ -0.65
SNRNP200-201ENST00000323853 KPNA5O15131 536 aa10.99□□□□□ -0.65
SNRNP200-201ENST00000323853 TGDSO95455 350 aa10.99□□□□□ -0.65
SNRNP200-201ENST00000323853 TSPAN8P19075 237 aa10.99□□□□□ -0.65
SNRNP200-201ENST00000323853 C4BPBP20851 252 aa10.99□□□□□ -0.65
SNRNP200-201ENST00000323853 NTSP30990 170 aa10.99□□□□□ -0.65
SNRNP200-201ENST00000323853 CSNK2BP67870 215 aa10.99□□□□□ -0.65
SNRNP200-201ENST00000323853 NOMO2Q5JPE7 1267 aa10.99□□□□□ -0.65
SNRNP200-201ENST00000323853 DCLRE1AQ6PJP8 1040 aa10.99□□□□□ -0.65
SNRNP200-201ENST00000323853 OR4L1Q8NH43 312 aa10.99□□□□□ -0.65
SNRNP200-201ENST00000323853 WDR36Q8NI36 951 aaKnown RBP10.99□□□□□ -0.65
SNRNP200-201ENST00000323853 DNAJB14Q8TBM8 379 aa10.99□□□□□ -0.65
SNRNP200-201ENST00000323853 SLC47A1Q96FL8 570 aa10.99□□□□□ -0.65
SNRNP200-201ENST00000323853 P2RY11Q96G91 374 aa10.99□□□□□ -0.65
SNRNP200-201ENST00000323853 PPP1R16AQ96I34 528 aa10.99□□□□□ -0.65
SNRNP200-201ENST00000323853 PACSIN3Q9UKS6 424 aa10.99□□□□□ -0.65
SNRNP200-201ENST00000323853 TRIM43BA6NCK2 446 aa10.98□□□□□ -0.65
SNRNP200-201ENST00000323853 FYNP06241 537 aa10.98□□□□□ -0.65
SNRNP200-201ENST00000323853 ERCC2P18074 760 aa10.98□□□□□ -0.65
SNRNP200-201ENST00000323853 EIF2B2P49770 351 aaKnown RBP10.98□□□□□ -0.65
SNRNP200-201ENST00000323853 HIRAP54198 1017 aaPredicted RBP10.98□□□□□ -0.65
SNRNP200-201ENST00000323853 PIWIL4Q7Z3Z4 852 aaKnown RBP10.98□□□□□ -0.65
SNRNP200-201ENST00000323853 VN1R5Q7Z5H4 357 aa10.98□□□□□ -0.65
SNRNP200-201ENST00000323853 ZNF557Q8N988 423 aaPredicted RBP10.98□□□□□ -0.65
SNRNP200-201ENST00000323853 NACC2Q96BF6 587 aa10.98□□□□□ -0.65
SNRNP200-201ENST00000323853 PLLPQ9Y342 182 aa10.98□□□□□ -0.65
SNRNP200-201ENST00000323853 B4GALT4O60513 344 aa10.98□□□□□ -0.65
SNRNP200-201ENST00000323853 EPHA3P29320 983 aa10.98□□□□□ -0.65
SNRNP200-201ENST00000323853 NOS3P29474 1203 aa10.98□□□□□ -0.65
SNRNP200-201ENST00000323853 RPL38P63173 70 aaKnown RBP10.98□□□□□ -0.65
SNRNP200-201ENST00000323853 XIAPP98170 497 aa10.98□□□□□ -0.65
SNRNP200-201ENST00000323853 CREMQ03060 361 aa10.98□□□□□ -0.65
SNRNP200-201ENST00000323853 MAPK11Q15759 364 aa10.98□□□□□ -0.65
SNRNP200-201ENST00000323853 LLGL2Q6P1M3 1020 aa10.98□□□□□ -0.65
SNRNP200-201ENST00000323853 RNFT2Q96EX2 444 aa10.98□□□□□ -0.65
SNRNP200-201ENST00000323853 GPR20Q99678 358 aa10.98□□□□□ -0.65
SNRNP200-201ENST00000323853 SEMA3CQ99985 751 aa10.98□□□□□ -0.65
SNRNP200-201ENST00000323853 VPS4AQ9UN37 437 aa10.98□□□□□ -0.65
SNRNP200-201ENST00000323853 HBS1LQ9Y450 684 aaKnown RBP10.98□□□□□ -0.65
SNRNP200-201ENST00000323853 SIGLEC1Q9BZZ2 1709 aa10.98□□□□□ -0.65
SNRNP200-201ENST00000323853 SGTAO43765 313 aa10.98□□□□□ -0.65
SNRNP200-201ENST00000323853 CILPO75339 1184 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms