RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 SCNN1GP51170 649 aa14.86□□□□□ -0.03
TCOF1-201ENST00000323668 FIG4Q92562 907 aa14.86□□□□□ -0.03
TCOF1-201ENST00000323668 HDAC10Q969S8 669 aa14.86□□□□□ -0.03
TCOF1-201ENST00000323668 POLR1EQ9GZS1 481 aaKnown RBP14.86□□□□□ -0.03
TCOF1-201ENST00000323668 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.86□□□□□ -0.03
TCOF1-201ENST00000323668 EGFL7Q9UHF1 273 aa14.86□□□□□ -0.03
TCOF1-201ENST00000323668 TMCO1Q9UM00 188 aa14.86□□□□□ -0.03
TCOF1-201ENST00000323668 LGR5O75473 907 aa14.86□□□□□ -0.03
TCOF1-201ENST00000323668 SLC2A4P14672 509 aa14.86□□□□□ -0.03
TCOF1-201ENST00000323668 RALGDSQ12967 914 aa14.86□□□□□ -0.03
TCOF1-201ENST00000323668 CHADLQ6NUI6 762 aa14.86□□□□□ -0.03
TCOF1-201ENST00000323668 PATL1Q86TB9 770 aaKnown RBP14.86□□□□□ -0.03
TCOF1-201ENST00000323668 UNC93B1Q9H1C4 597 aa14.86□□□□□ -0.03
TCOF1-201ENST00000323668 AZIN1O14977 448 aa14.85□□□□□ -0.03
TCOF1-201ENST00000323668 TIPRLO75663 272 aa14.85□□□□□ -0.03
TCOF1-201ENST00000323668 FMO4P31512 558 aa14.85□□□□□ -0.03
TCOF1-201ENST00000323668 S100A5P33763 92 aa14.85□□□□□ -0.03
TCOF1-201ENST00000323668 TRIM25Q14258 630 aaKnown RBP14.85□□□□□ -0.03
TCOF1-201ENST00000323668 TARBP2Q15633 366 aaKnown RBP14.85□□□□□ -0.03
TCOF1-201ENST00000323668 MTX3Q5HYI7 312 aa14.85□□□□□ -0.03
TCOF1-201ENST00000323668 SNX31Q8N9S9 440 aa14.85□□□□□ -0.03
TCOF1-201ENST00000323668 ITFG1Q8TB96 612 aa14.85□□□□□ -0.03
TCOF1-201ENST00000323668 FCRL2Q96LA5 508 aaPredicted RBP14.85□□□□□ -0.03
TCOF1-201ENST00000323668 TSPAN18Q96SJ8 248 aa14.85□□□□□ -0.03
TCOF1-201ENST00000323668 ACOX2Q99424 681 aa14.85□□□□□ -0.03
TCOF1-201ENST00000323668 ADGRE3Q9BY15 652 aa14.85□□□□□ -0.03
TCOF1-201ENST00000323668 POLR1BQ9H9Y6 1135 aa14.85□□□□□ -0.03
TCOF1-201ENST00000323668 SCUBE2Q9NQ36 999 aa14.85□□□□□ -0.03
TCOF1-201ENST00000323668 ADGRE1Q14246 886 aa14.85□□□□□ -0.03
TCOF1-201ENST00000323668 DMC1Q14565 340 aa14.85□□□□□ -0.03
TCOF1-201ENST00000323668 PLEKHG4Q58EX7 1191 aa14.85□□□□□ -0.03
TCOF1-201ENST00000323668 MBLAC2Q68D91 279 aa14.85□□□□□ -0.03
TCOF1-201ENST00000323668 ABRAXAS1Q6UWZ7 409 aa14.85□□□□□ -0.03
TCOF1-201ENST00000323668 SLC35F5Q8WV83 523 aa14.85□□□□□ -0.03
TCOF1-201ENST00000323668 PDLIM7Q9NR12 457 aa14.85□□□□□ -0.03
TCOF1-201ENST00000323668 LIMD1Q9UGP4 676 aa14.85□□□□□ -0.03
TCOF1-201ENST00000323668 TMEM247A6NEH6 219 aa14.85□□□□□ -0.03
TCOF1-201ENST00000323668 LRIG2O94898 1065 aa14.85□□□□□ -0.03
TCOF1-201ENST00000323668 SCNN1AP37088 669 aa14.85□□□□□ -0.03
TCOF1-201ENST00000323668 CCNG1P51959 295 aa14.85□□□□□ -0.03
TCOF1-201ENST00000323668 MPP1Q00013 466 aa14.85□□□□□ -0.03
TCOF1-201ENST00000323668 CTXN3Q4LDR2 81 aa14.85□□□□□ -0.03
TCOF1-201ENST00000323668 RNF219Q5W0B1 726 aaPredicted RBP14.85□□□□□ -0.03
TCOF1-201ENST00000323668 PHTF2Q8N3S3 785 aa14.85□□□□□ -0.03
TCOF1-201ENST00000323668 SPATA22Q8NHS9 363 aa14.85□□□□□ -0.03
TCOF1-201ENST00000323668 FAM120BQ96EK7 910 aaKnown RBP14.85□□□□□ -0.03
TCOF1-201ENST00000323668 UGT2B28Q9BY64 529 aa14.85□□□□□ -0.03
TCOF1-201ENST00000323668 CATSPERZQ9NTU4 200 aa14.85□□□□□ -0.03
TCOF1-201ENST00000323668 TRMUO75648 421 aaKnown RBP14.85□□□□□ -0.03
TCOF1-201ENST00000323668 NDUFV1P49821 464 aa14.85□□□□□ -0.03
TCOF1-201ENST00000323668 MAXP61244 160 aa14.85□□□□□ -0.03
TCOF1-201ENST00000323668 VAC14Q08AM6 782 aa14.85□□□□□ -0.03
TCOF1-201ENST00000323668 FAM156AQ8NDB6 213 aa14.85□□□□□ -0.03
TCOF1-201ENST00000323668 OR9Q1Q8NGQ5 310 aa14.85□□□□□ -0.03
TCOF1-201ENST00000323668 UTP4Q969X6 686 aaKnown RBP14.85□□□□□ -0.03
TCOF1-201ENST00000323668 OR52B2Q96RD2 323 aa14.85□□□□□ -0.03
TCOF1-201ENST00000323668 LPIN3Q9BQK8 851 aa14.85□□□□□ -0.03
TCOF1-201ENST00000323668 DPY30Q9C005 99 aa14.85□□□□□ -0.03
TCOF1-201ENST00000323668 SNAP91O60641 907 aa14.84□□□□□ -0.03
TCOF1-201ENST00000323668 SERPINB1P30740 379 aa14.84□□□□□ -0.03
TCOF1-201ENST00000323668 MYLPFQ96A32 169 aa14.84□□□□□ -0.03
TCOF1-201ENST00000323668 PRR11Q96HE9 360 aaPredicted RBP14.84□□□□□ -0.03
TCOF1-201ENST00000323668 HOPXQ9BPY8 73 aaPredicted RBP14.84□□□□□ -0.03
TCOF1-201ENST00000323668 GPBP1L1Q9HC44 474 aaPredicted RBP14.84□□□□□ -0.03
TCOF1-201ENST00000323668 PTTG2Q9NZH5 202 aa14.84□□□□□ -0.03
TCOF1-201ENST00000323668 SCHIP1Q9P0W5 487 aaPredicted RBP14.84□□□□□ -0.03
TCOF1-201ENST00000323668 LEF1Q9UJU2 399 aaPredicted RBP14.84□□□□□ -0.03
TCOF1-201ENST00000323668 KATNA1O75449 491 aa14.84□□□□□ -0.03
TCOF1-201ENST00000323668 IRF1P10914 325 aa14.84□□□□□ -0.03
TCOF1-201ENST00000323668 PSMD5Q16401 504 aa14.84□□□□□ -0.03
TCOF1-201ENST00000323668 ESRP1Q6NXG1 681 aaKnown RBP14.84□□□□□ -0.03
TCOF1-201ENST00000323668 VPS37AQ8NEZ2 397 aa14.84□□□□□ -0.03
TCOF1-201ENST00000323668 LPCAT1Q8NF37 534 aa14.84□□□□□ -0.03
TCOF1-201ENST00000323668 PTCD2Q8WV60 388 aaKnown RBP14.84□□□□□ -0.03
TCOF1-201ENST00000323668 SNX27Q96L92 541 aa14.84□□□□□ -0.03
TCOF1-201ENST00000323668 TEKT5Q96M29 485 aa14.84□□□□□ -0.03
TCOF1-201ENST00000323668 PLGRKTQ9HBL7 147 aa14.84□□□□□ -0.03
TCOF1-201ENST00000323668 OXSMQ9NWU1 459 aa14.84□□□□□ -0.03
TCOF1-201ENST00000323668 CYTH4Q9UIA0 394 aa14.84□□□□□ -0.03
TCOF1-201ENST00000323668 SLC22A2O15244 555 aa14.84□□□□□ -0.03
TCOF1-201ENST00000323668 TSPAN3O60637 253 aa14.84□□□□□ -0.03
TCOF1-201ENST00000323668 RTN3O95197 1032 aaPredicted RBP14.84□□□□□ -0.03
TCOF1-201ENST00000323668 LILRA4P59901 499 aa14.84□□□□□ -0.03
TCOF1-201ENST00000323668 DAB2P98082 770 aa14.84□□□□□ -0.03
TCOF1-201ENST00000323668 INCA1Q0VD86 236 aa14.84□□□□□ -0.03
TCOF1-201ENST00000323668 FSTL1Q12841 308 aa14.84□□□□□ -0.03
TCOF1-201ENST00000323668 ATP1A4Q13733 1029 aa14.84□□□□□ -0.03
TCOF1-201ENST00000323668 BRMS1LQ5PSV4 323 aa14.84□□□□□ -0.03
TCOF1-201ENST00000323668 TMEM198Q66K66 360 aa14.84□□□□□ -0.03
TCOF1-201ENST00000323668 FAM9CQ8IZT9 166 aa14.84□□□□□ -0.03
TCOF1-201ENST00000323668 GLMNQ92990 594 aa14.84□□□□□ -0.03
TCOF1-201ENST00000323668 RMND5AQ9H871 391 aa14.84□□□□□ -0.03
TCOF1-201ENST00000323668 FAM32AQ9Y421 112 aaKnown RBP14.84□□□□□ -0.03
TCOF1-201ENST00000323668 CBX4O00257 560 aa14.83□□□□□ -0.03
TCOF1-201ENST00000323668 THOP1P52888 689 aa14.83□□□□□ -0.03
TCOF1-201ENST00000323668 MAPK10P53779 464 aa14.83□□□□□ -0.03
TCOF1-201ENST00000323668 TAS2R39P59534 338 aa14.83□□□□□ -0.03
TCOF1-201ENST00000323668 DLG1Q12959 904 aa14.83□□□□□ -0.03
TCOF1-201ENST00000323668 GPSM1Q86YR5 675 aa14.83□□□□□ -0.03
TCOF1-201ENST00000323668 HOMEZQ8IX15 550 aa14.83□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms