RNA–Protein interactions for RNA: ENST00000322875.8

CD46-201, Transcript of CD46 molecule, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CD46, Length 3,278 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-201ENST00000322875 ROPN1LQ96C74 230 aa7.87□□□□□ -1.15
CD46-201ENST00000322875 CLIP3Q96DZ5 547 aa7.87□□□□□ -1.15
CD46-201ENST00000322875 ADPGKQ9BRR6 497 aa7.87□□□□□ -1.15
CD46-201ENST00000322875 SNRNP25Q9BV90 132 aaKnown RBP7.87□□□□□ -1.15
CD46-201ENST00000322875 GPATCH2LQ9NWQ4 482 aa7.87□□□□□ -1.15
CD46-201ENST00000322875 ANKRD6Q9Y2G4 727 aa7.87□□□□□ -1.15
CD46-201ENST00000322875 PCDHA10Q9Y5I2 948 aa7.87□□□□□ -1.15
CD46-201ENST00000322875 USP3Q9Y6I4 520 aa7.87□□□□□ -1.15
CD46-201ENST00000322875 SSC5DA1L4H1 1573 aa7.87□□□□□ -1.15
CD46-201ENST00000322875 PARP14Q460N5 1801 aa7.87□□□□□ -1.15
CD46-201ENST00000322875 DHRS12A0PJE2 317 aa7.87□□□□□ -1.15
CD46-201ENST00000322875 KLRG2A4D1S0 409 aaPredicted RBP7.87□□□□□ -1.15
CD46-201ENST00000322875 FAM149AA5PLN7 773 aa7.87□□□□□ -1.15
CD46-201ENST00000322875 A8MU76 341 aa7.87□□□□□ -1.15
CD46-201ENST00000322875 NME4O00746 187 aa7.87□□□□□ -1.15
CD46-201ENST00000322875 EI24O14681 340 aa7.87□□□□□ -1.15
CD46-201ENST00000322875 SCO2O43819 266 aa7.87□□□□□ -1.15
CD46-201ENST00000322875 DLX3O60479 287 aa7.87□□□□□ -1.15
CD46-201ENST00000322875 MICAL2O94851 1124 aa7.87□□□□□ -1.15
CD46-201ENST00000322875 POLBP06746 335 aa7.87□□□□□ -1.15
CD46-201ENST00000322875 TFE3P19532 575 aaPredicted RBP7.87□□□□□ -1.15
CD46-201ENST00000322875 CRHBPP24387 322 aa7.87□□□□□ -1.15
CD46-201ENST00000322875 CYP2F1P24903 491 aa7.87□□□□□ -1.15
CD46-201ENST00000322875 OXTRP30559 389 aa7.87□□□□□ -1.15
CD46-201ENST00000322875 CD68P34810 354 aaPredicted RBP7.87□□□□□ -1.15
CD46-201ENST00000322875 TNFSF9P41273 254 aa7.87□□□□□ -1.15
CD46-201ENST00000322875 TPTEP56180 551 aa7.87□□□□□ -1.15
CD46-201ENST00000322875 TRIM32Q13049 653 aa7.87□□□□□ -1.15
CD46-201ENST00000322875 MAPRE1Q15691 268 aaKnown RBP7.87□□□□□ -1.15
CD46-201ENST00000322875 DPYSL2Q16555 572 aa7.87□□□□□ -1.15
CD46-201ENST00000322875 PERM1Q5SV97 790 aa7.87□□□□□ -1.15
CD46-201ENST00000322875 ATAD3BQ5T9A4 648 aa7.87□□□□□ -1.15
CD46-201ENST00000322875 PMF1Q6P1K2 205 aa7.87□□□□□ -1.15
CD46-201ENST00000322875 KIAA0408Q6ZU52 694 aa7.87□□□□□ -1.15
CD46-201ENST00000322875 NEK10Q6ZWH5 1172 aa7.87□□□□□ -1.15
CD46-201ENST00000322875 PIWIL3Q7Z3Z3 882 aaKnown RBP7.87□□□□□ -1.15
CD46-201ENST00000322875 STRA8Q7Z7C7 330 aa7.87□□□□□ -1.15
CD46-201ENST00000322875 FAM160B2Q86V87 743 aa7.87□□□□□ -1.15
CD46-201ENST00000322875 SPARTQ8N0X7 666 aa7.87□□□□□ -1.15
CD46-201ENST00000322875 TRPV3Q8NET8 790 aa7.87□□□□□ -1.15
CD46-201ENST00000322875 BPIFB6Q8NFQ5 453 aa7.87□□□□□ -1.15
CD46-201ENST00000322875 CXorf38Q8TB03 319 aa7.87□□□□□ -1.15
CD46-201ENST00000322875 SYTL5Q8TDW5 730 aaPredicted RBP7.87□□□□□ -1.15
CD46-201ENST00000322875 CYGBQ8WWM9 190 aa7.87□□□□□ -1.15
CD46-201ENST00000322875 MUL1Q969V5 352 aa7.87□□□□□ -1.15
CD46-201ENST00000322875 ZNF486Q96H40 463 aaPredicted RBP7.87□□□□□ -1.15
CD46-201ENST00000322875 YME1L1Q96TA2 773 aa7.87□□□□□ -1.15
CD46-201ENST00000322875 AGAP2Q99490 1192 aa7.87□□□□□ -1.15
CD46-201ENST00000322875 C11orf84Q9BUA3 381 aaPredicted RBP7.87□□□□□ -1.15
CD46-201ENST00000322875 TARS2Q9BW92 718 aaKnown RBP7.87□□□□□ -1.15
CD46-201ENST00000322875 FUNDC2Q9BWH2 189 aa7.87□□□□□ -1.15
CD46-201ENST00000322875 SP140LQ9H930 580 aa7.87□□□□□ -1.15
CD46-201ENST00000322875 LRRC4Q9HBW1 653 aa7.87□□□□□ -1.15
CD46-201ENST00000322875 CPNE5Q9HCH3 593 aa7.87□□□□□ -1.15
CD46-201ENST00000322875 TBC1D13Q9NVG8 400 aa7.87□□□□□ -1.15
CD46-201ENST00000322875 PKD2L2Q9NZM6 624 aa7.87□□□□□ -1.15
CD46-201ENST00000322875 FBXO40Q9UH90 709 aa7.87□□□□□ -1.15
CD46-201ENST00000322875 PMF1-BGLAPU3KQ54 211 aa7.87□□□□□ -1.15
CD46-201ENST00000322875 CENPBD1B2RD01 187 aa7.86□□□□□ -1.15
CD46-201ENST00000322875 B4GAT1O43505 415 aa7.86□□□□□ -1.15
CD46-201ENST00000322875 DNAJB5O75953 348 aa7.86□□□□□ -1.15
CD46-201ENST00000322875 FARP2O94887 1054 aaPredicted RBP7.86□□□□□ -1.15
CD46-201ENST00000322875 SNAP29O95721 258 aa7.86□□□□□ -1.15
CD46-201ENST00000322875 SNRPB2P08579 225 aaKnown RBP7.86□□□□□ -1.15
CD46-201ENST00000322875 HSPA8P11142 646 aaKnown RBP7.86□□□□□ -1.15
CD46-201ENST00000322875 PDGFRAP16234 1089 aa7.86□□□□□ -1.15
CD46-201ENST00000322875 CXCR2P25025 360 aa7.86□□□□□ -1.15
CD46-201ENST00000322875 FASP25445 335 aa7.86□□□□□ -1.15
CD46-201ENST00000322875 HTR1BP28222 390 aa7.86□□□□□ -1.15
CD46-201ENST00000322875 RFC2P35250 354 aa7.86□□□□□ -1.15
CD46-201ENST00000322875 ARL2P36404 184 aa7.86□□□□□ -1.15
CD46-201ENST00000322875 RPS9P46781 194 aaKnown RBP7.86□□□□□ -1.15
CD46-201ENST00000322875 ATP4BP51164 291 aa7.86□□□□□ -1.15
CD46-201ENST00000322875 MAPK10P53779 464 aa7.86□□□□□ -1.15
CD46-201ENST00000322875 CSE1LP55060 971 aaKnown RBP7.86□□□□□ -1.15
CD46-201ENST00000322875 GJA9P57773 515 aa7.86□□□□□ -1.15
CD46-201ENST00000322875 DNASE1L3Q13609 305 aa7.86□□□□□ -1.15
CD46-201ENST00000322875 SEZ6Q53EL9 994 aa7.86□□□□□ -1.15
CD46-201ENST00000322875 LDLRAP1Q5SW96 308 aa7.86□□□□□ -1.15
CD46-201ENST00000322875 FAM102AQ5T9C2 384 aaPredicted RBP7.86□□□□□ -1.15
CD46-201ENST00000322875 BROXQ5VW32 411 aa7.86□□□□□ -1.15
CD46-201ENST00000322875 BTBD8Q5XKL5 378 aa7.86□□□□□ -1.15
CD46-201ENST00000322875 NXNQ6DKJ4 435 aa7.86□□□□□ -1.15
CD46-201ENST00000322875 UGT3A1Q6NUS8 523 aa7.86□□□□□ -1.15
CD46-201ENST00000322875 CYHR1Q6ZMK1 362 aa7.86□□□□□ -1.15
CD46-201ENST00000322875 TRMT1LQ7Z2T5 733 aaKnown RBP7.86□□□□□ -1.15
CD46-201ENST00000322875 SAPCD2Q86UD0 394 aa7.86□□□□□ -1.15
CD46-201ENST00000322875 ERO1BQ86YB8 467 aa7.86□□□□□ -1.15
CD46-201ENST00000322875 SNX29P2Q8IUI4 249 aa7.86□□□□□ -1.15
CD46-201ENST00000322875 FUNDC1Q8IVP5 155 aa7.86□□□□□ -1.15
CD46-201ENST00000322875 CENPLQ8N0S6 344 aaPredicted RBP7.86□□□□□ -1.15
CD46-201ENST00000322875 SFRP1Q8N474 314 aa7.86□□□□□ -1.15
CD46-201ENST00000322875 OR7G1Q8NGA0 311 aa7.86□□□□□ -1.15
CD46-201ENST00000322875 MAGED4Q96JG8 741 aa7.86□□□□□ -1.15
CD46-201ENST00000322875 TWNKQ96RR1 684 aa7.86□□□□□ -1.15
CD46-201ENST00000322875 GPR22Q99680 433 aa7.86□□□□□ -1.15
CD46-201ENST00000322875 BCL7BQ9BQE9 202 aa7.86□□□□□ -1.15
CD46-201ENST00000322875 UPF3AQ9H1J1 476 aaKnown RBP7.86□□□□□ -1.15
CD46-201ENST00000322875 OSBPL2Q9H1P3 480 aa7.86□□□□□ -1.15
CD46-201ENST00000322875 DHX35Q9H5Z1 703 aaKnown RBP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms