RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 SGF29Q96ES7 293 aa15.71■□□□□ 0.11
SHROOM1-201ENST00000319854 Q9H521 79 aa15.71■□□□□ 0.11
SHROOM1-201ENST00000319854 PFDN4Q9NQP4 134 aa15.71■□□□□ 0.11
SHROOM1-201ENST00000319854 RNF11Q9Y3C5 154 aa15.71■□□□□ 0.11
SHROOM1-201ENST00000319854 RALGAPA2Q2PPJ7 1873 aa15.71■□□□□ 0.11
SHROOM1-201ENST00000319854 ALDH1A2O94788 518 aa15.71■□□□□ 0.11
SHROOM1-201ENST00000319854 VAPBO95292 243 aa15.71■□□□□ 0.11
SHROOM1-201ENST00000319854 PRKAR2AP13861 404 aaKnown RBP15.71■□□□□ 0.11
SHROOM1-201ENST00000319854 CXCR3P49682 368 aa15.71■□□□□ 0.11
SHROOM1-201ENST00000319854 THOP1P52888 689 aa15.71■□□□□ 0.11
SHROOM1-201ENST00000319854 TSPY1Q01534 308 aa15.71■□□□□ 0.11
SHROOM1-201ENST00000319854 PCLAFQ15004 111 aa15.71■□□□□ 0.11
SHROOM1-201ENST00000319854 RAB41Q5JT25 222 aa15.71■□□□□ 0.11
SHROOM1-201ENST00000319854 PPM1LQ5SGD2 360 aa15.71■□□□□ 0.11
SHROOM1-201ENST00000319854 STEAP4Q687X5 459 aa15.71■□□□□ 0.11
SHROOM1-201ENST00000319854 BORAQ6PGQ7 559 aa15.71■□□□□ 0.11
SHROOM1-201ENST00000319854 POTEHQ6S545 545 aa15.71■□□□□ 0.11
SHROOM1-201ENST00000319854 DENND6AQ8IWF6 608 aa15.71■□□□□ 0.11
SHROOM1-201ENST00000319854 LRRC43Q8N309 656 aa15.71■□□□□ 0.11
SHROOM1-201ENST00000319854 RAB3IL1Q8TBN0 382 aa15.71■□□□□ 0.11
SHROOM1-201ENST00000319854 LENG8Q96PV6 779 aaPredicted RBP15.71■□□□□ 0.11
SHROOM1-201ENST00000319854 FTHL17Q9BXU8 183 aa15.71■□□□□ 0.11
SHROOM1-201ENST00000319854 TRPV6Q9H1D0 765 aa15.71■□□□□ 0.11
SHROOM1-201ENST00000319854 MKS1Q9NXB0 559 aa15.71■□□□□ 0.11
SHROOM1-201ENST00000319854 RSL24D1Q9UHA3 163 aaKnown RBP15.71■□□□□ 0.11
SHROOM1-201ENST00000319854 GOLGA8QA0A0J9YX86 632 aa15.71■□□□□ 0.1
SHROOM1-201ENST00000319854 GOLGA8OA6NCC3 632 aa15.71■□□□□ 0.1
SHROOM1-201ENST00000319854 GOLGA8NF8WBI6 632 aa15.71■□□□□ 0.1
SHROOM1-201ENST00000319854 TMX2-CTNND1H3BSU7 103 aa15.71■□□□□ 0.1
SHROOM1-201ENST00000319854 CCL22O00626 93 aa15.71■□□□□ 0.1
SHROOM1-201ENST00000319854 NEMP1O14524 444 aa15.71■□□□□ 0.1
SHROOM1-201ENST00000319854 GLRA3O75311 464 aa15.71■□□□□ 0.1
SHROOM1-201ENST00000319854 COL6A2P12110 1019 aa15.71■□□□□ 0.1
SHROOM1-201ENST00000319854 CYBAP13498 195 aa15.71■□□□□ 0.1
SHROOM1-201ENST00000319854 MX2P20592 715 aa15.71■□□□□ 0.1
SHROOM1-201ENST00000319854 YWHAHQ04917 246 aaPredicted RBP15.71■□□□□ 0.1
SHROOM1-201ENST00000319854 BNIPLQ7Z465 357 aa15.71■□□□□ 0.1
SHROOM1-201ENST00000319854 C14orf80Q86SX3 495 aa15.71■□□□□ 0.1
SHROOM1-201ENST00000319854 TTC16Q8NEE8 873 aa15.71■□□□□ 0.1
SHROOM1-201ENST00000319854 PPP1R14BQ96C90 147 aa15.71■□□□□ 0.1
SHROOM1-201ENST00000319854 SCYL1Q96KG9 808 aa15.71■□□□□ 0.1
SHROOM1-201ENST00000319854 SLX1AQ9BQ83 275 aa15.71■□□□□ 0.1
SHROOM1-201ENST00000319854 FICDQ9BVA6 458 aa15.71■□□□□ 0.1
SHROOM1-201ENST00000319854 GBA3Q9H227 469 aa15.71■□□□□ 0.1
SHROOM1-201ENST00000319854 SLC2A6Q9UGQ3 507 aa15.71■□□□□ 0.1
SHROOM1-201ENST00000319854 PTCH2Q9Y6C5 1203 aa15.71■□□□□ 0.1
SHROOM1-201ENST00000319854 ZCWPW2A0A1B0GU75 182 aa15.7■□□□□ 0.1
SHROOM1-201ENST00000319854 A0A1W2PQH9 124 aa15.7■□□□□ 0.1
SHROOM1-201ENST00000319854 PRKCGP05129 697 aa15.7■□□□□ 0.1
SHROOM1-201ENST00000319854 RPL10P27635 214 aaKnown RBP15.7■□□□□ 0.1
SHROOM1-201ENST00000319854 HOXC8P31273 242 aa15.7■□□□□ 0.1
SHROOM1-201ENST00000319854 PKNOX1P55347 436 aa15.7■□□□□ 0.1
SHROOM1-201ENST00000319854 CROCCQ5TZA2 2017 aa15.7■□□□□ 0.1
SHROOM1-201ENST00000319854 ERI1Q8IV48 349 aaKnown RBP15.7■□□□□ 0.1
SHROOM1-201ENST00000319854 RNF168Q8IYW5 571 aaPredicted RBP15.7■□□□□ 0.1
SHROOM1-201ENST00000319854 NTAN1Q96AB6 310 aa15.7■□□□□ 0.1
SHROOM1-201ENST00000319854 SLC2A11Q9BYW1 496 aa15.7■□□□□ 0.1
SHROOM1-201ENST00000319854 ARHGAP26Q9UNA1 814 aa15.7■□□□□ 0.1
SHROOM1-201ENST00000319854 FAF1Q9UNN5 650 aaPredicted RBP15.7■□□□□ 0.1
SHROOM1-201ENST00000319854 TK2O00142 265 aa15.7■□□□□ 0.1
SHROOM1-201ENST00000319854 TOMM70O94826 608 aa15.7■□□□□ 0.1
SHROOM1-201ENST00000319854 F9P00740 461 aa15.7■□□□□ 0.1
SHROOM1-201ENST00000319854 RALBP11234 206 aa15.7■□□□□ 0.1
SHROOM1-201ENST00000319854 NAA20P61599 178 aa15.7■□□□□ 0.1
SHROOM1-201ENST00000319854 NRF1Q16656 503 aa15.7■□□□□ 0.1
SHROOM1-201ENST00000319854 RARS2Q5T160 578 aaKnown RBP15.7■□□□□ 0.1
SHROOM1-201ENST00000319854 IL31Q6EBC2 164 aa15.7■□□□□ 0.1
SHROOM1-201ENST00000319854 ATAD1Q8NBU5 361 aa15.7■□□□□ 0.1
SHROOM1-201ENST00000319854 MAPK15Q8TD08 544 aa15.7■□□□□ 0.1
SHROOM1-201ENST00000319854 KLHL5Q96PQ7 755 aa15.7■□□□□ 0.1
SHROOM1-201ENST00000319854 HCSTQ9UBK5 93 aa15.7■□□□□ 0.1
SHROOM1-201ENST00000319854 PAIP2BQ9ULR5 123 aaKnown RBP15.7■□□□□ 0.1
SHROOM1-201ENST00000319854 A0A0U1RQF3 1178 aa15.69■□□□□ 0.1
SHROOM1-201ENST00000319854 C7orf72A4D263 438 aa15.69■□□□□ 0.1
SHROOM1-201ENST00000319854 CPA3P15088 417 aa15.69■□□□□ 0.1
SHROOM1-201ENST00000319854 EPHA3P29320 983 aa15.69■□□□□ 0.1
SHROOM1-201ENST00000319854 MPP1Q00013 466 aa15.69■□□□□ 0.1
SHROOM1-201ENST00000319854 KLF10Q13118 480 aa15.69■□□□□ 0.1
SHROOM1-201ENST00000319854 C16orf72Q14CZ0 275 aa15.69■□□□□ 0.1
SHROOM1-201ENST00000319854 SLC9B1Q4ZJI4 515 aa15.69■□□□□ 0.1
SHROOM1-201ENST00000319854 ZNF280DQ6N043 979 aa15.69■□□□□ 0.1
SHROOM1-201ENST00000319854 NCCRP1Q6ZVX7 275 aaPredicted RBP15.69■□□□□ 0.1
SHROOM1-201ENST00000319854 RNF135Q8IUD6 432 aa15.69■□□□□ 0.1
SHROOM1-201ENST00000319854 ALDH16A1Q8IZ83 802 aa15.69■□□□□ 0.1
SHROOM1-201ENST00000319854 THEM5Q8N1Q8 247 aa15.69■□□□□ 0.1
SHROOM1-201ENST00000319854 DDI1Q8WTU0 396 aa15.69■□□□□ 0.1
SHROOM1-201ENST00000319854 USP13Q92995 863 aaPredicted RBP15.69■□□□□ 0.1
SHROOM1-201ENST00000319854 PABPC5Q96DU9 382 aaKnown RBP15.69■□□□□ 0.1
SHROOM1-201ENST00000319854 TEKT5Q96M29 485 aa15.69■□□□□ 0.1
SHROOM1-201ENST00000319854 CDRT15Q96T59 188 aa15.69■□□□□ 0.1
SHROOM1-201ENST00000319854 SLC9A7Q96T83 725 aa15.69■□□□□ 0.1
SHROOM1-201ENST00000319854 ACBD6Q9BR61 282 aa15.69■□□□□ 0.1
SHROOM1-201ENST00000319854 SLC39A8Q9C0K1 460 aa15.69■□□□□ 0.1
SHROOM1-201ENST00000319854 DOLKQ9UPQ8 538 aa15.69■□□□□ 0.1
SHROOM1-201ENST00000319854 SLC27A5Q9Y2P5 690 aa15.69■□□□□ 0.1
SHROOM1-201ENST00000319854 DDHD2O94830 711 aa15.69■□□□□ 0.1
SHROOM1-201ENST00000319854 C2P06681 752 aa15.69■□□□□ 0.1
SHROOM1-201ENST00000319854 SPRP35270 261 aaPredicted RBP15.69■□□□□ 0.1
SHROOM1-201ENST00000319854 SERPINB5P36952 375 aa15.69■□□□□ 0.1
SHROOM1-201ENST00000319854 TUSC3Q13454 348 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms