RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 C6orf10Q5SRN2 563 aa19.28■□□□□ 0.68
RTN4-201ENST00000317610 FAM45BPQ6NSW5 357 aa19.28■□□□□ 0.68
RTN4-201ENST00000317610 HMBOX1Q6NT76 420 aa19.28■□□□□ 0.68
RTN4-201ENST00000317610 SPATA6LQ8N4H0 392 aa19.28■□□□□ 0.68
RTN4-201ENST00000317610 FAM45AQ8TCE6 357 aa19.28■□□□□ 0.68
RTN4-201ENST00000317610 HM13Q8TCT9 377 aa19.28■□□□□ 0.68
RTN4-201ENST00000317610 HEXDCQ8WVB3 486 aa19.28■□□□□ 0.68
RTN4-201ENST00000317610 SLC29A1Q99808 456 aa19.28■□□□□ 0.68
RTN4-201ENST00000317610 ANKRD60Q9BZ19 345 aa19.28■□□□□ 0.68
RTN4-201ENST00000317610 ELP3Q9H9T3 547 aa19.28■□□□□ 0.68
RTN4-201ENST00000317610 CDHR5Q9HBB8 845 aa19.28■□□□□ 0.68
RTN4-201ENST00000317610 GOLGA2P5Q9HBQ8 144 aa19.28■□□□□ 0.68
RTN4-201ENST00000317610 TMEM181Q9P2C4 612 aa19.28■□□□□ 0.68
RTN4-201ENST00000317610 MYRFQ9Y2G1 1151 aa19.28■□□□□ 0.68
RTN4-201ENST00000317610 MAP3K7CLP57077 242 aa19.28■□□□□ 0.68
RTN4-201ENST00000317610 TMEM62Q0P6H9 643 aa19.28■□□□□ 0.68
RTN4-201ENST00000317610 PPIL2Q13356 520 aa19.28■□□□□ 0.68
RTN4-201ENST00000317610 MTX3Q5HYI7 312 aa19.28■□□□□ 0.68
RTN4-201ENST00000317610 DENND5AQ6IQ26 1287 aa19.28■□□□□ 0.68
RTN4-201ENST00000317610 DLK2Q6UY11 383 aa19.28■□□□□ 0.68
RTN4-201ENST00000317610 TRIML2Q8N7C3 387 aa19.28■□□□□ 0.68
RTN4-201ENST00000317610 C2CD4AQ8NCU7 369 aaPredicted RBP19.28■□□□□ 0.68
RTN4-201ENST00000317610 PTCD2Q8WV60 388 aaKnown RBP19.28■□□□□ 0.68
RTN4-201ENST00000317610 GFM2Q969S9 779 aaKnown RBP19.28■□□□□ 0.68
RTN4-201ENST00000317610 ZNF512Q96ME7 567 aaPredicted RBP19.28■□□□□ 0.68
RTN4-201ENST00000317610 COLEC11Q9BWP8 271 aa19.28■□□□□ 0.68
RTN4-201ENST00000317610 TRPV6Q9H1D0 765 aa19.28■□□□□ 0.68
RTN4-201ENST00000317610 IGSF5Q9NSI5 407 aa19.28■□□□□ 0.68
RTN4-201ENST00000317610 RRN3Q9NYV6 651 aa19.28■□□□□ 0.68
RTN4-201ENST00000317610 KLK14Q9P0G3 267 aa19.28■□□□□ 0.68
RTN4-201ENST00000317610 GINS2Q9Y248 185 aa19.28■□□□□ 0.68
RTN4-201ENST00000317610 UBDO15205 165 aa19.27■□□□□ 0.68
RTN4-201ENST00000317610 CSPG5O95196 566 aa19.27■□□□□ 0.68
RTN4-201ENST00000317610 FAM163BP0C2L3 166 aa19.27■□□□□ 0.68
RTN4-201ENST00000317610 HOXD8P13378 290 aaPredicted RBP19.27■□□□□ 0.68
RTN4-201ENST00000317610 SLC1A2P43004 574 aa19.27■□□□□ 0.68
RTN4-201ENST00000317610 CDC42EP1Q00587 391 aa19.27■□□□□ 0.68
RTN4-201ENST00000317610 PFKPQ01813 784 aa19.27■□□□□ 0.68
RTN4-201ENST00000317610 PM20D1Q6GTS8 502 aa19.27■□□□□ 0.68
RTN4-201ENST00000317610 ESRP1Q6NXG1 681 aaKnown RBP19.27■□□□□ 0.68
RTN4-201ENST00000317610 AFAP1L2Q8N4X5 818 aa19.27■□□□□ 0.68
RTN4-201ENST00000317610 ANKFN1Q8N957 763 aa19.27■□□□□ 0.68
RTN4-201ENST00000317610 SHCBP1Q8NEM2 672 aa19.27■□□□□ 0.68
RTN4-201ENST00000317610 ITFG2Q969R8 447 aa19.27■□□□□ 0.68
RTN4-201ENST00000317610 BIRC8Q96P09 236 aa19.27■□□□□ 0.68
RTN4-201ENST00000317610 FCRL5Q96RD9 977 aa19.27■□□□□ 0.68
RTN4-201ENST00000317610 TMEM79Q9BSE2 394 aa19.27■□□□□ 0.68
RTN4-201ENST00000317610 CNGB3Q9NQW8 809 aa19.27■□□□□ 0.68
RTN4-201ENST00000317610 DDIT4Q9NX09 232 aa19.27■□□□□ 0.68
RTN4-201ENST00000317610 CNOT6Q9ULM6 557 aaKnown RBP19.27■□□□□ 0.68
RTN4-201ENST00000317610 GABRDO14764 452 aa19.26■□□□□ 0.67
RTN4-201ENST00000317610 HTRA2O43464 458 aaPredicted RBP19.26■□□□□ 0.67
RTN4-201ENST00000317610 LRIG2O94898 1065 aa19.26■□□□□ 0.67
RTN4-201ENST00000317610 SNRPB2P08579 225 aaKnown RBP19.26■□□□□ 0.67
RTN4-201ENST00000317610 HNRNPLP14866 589 aaKnown RBP eCLIP19.26■□□□□ 0.675e-9■■■□□ 16.4
RTN4-201ENST00000317610 C1QTNF8P60827 252 aa19.26■□□□□ 0.67
RTN4-201ENST00000317610 COG7P83436 770 aa19.26■□□□□ 0.67
RTN4-201ENST00000317610 POU4F1Q01851 419 aa19.26■□□□□ 0.67
RTN4-201ENST00000317610 GALNT1Q10472 559 aaPredicted RBP19.26■□□□□ 0.67
RTN4-201ENST00000317610 AGKQ53H12 422 aa19.26■□□□□ 0.67
RTN4-201ENST00000317610 TECRLQ5HYJ1 363 aa19.26■□□□□ 0.67
RTN4-201ENST00000317610 SAMD4BQ5PRF9 694 aaKnown RBP19.26■□□□□ 0.67
RTN4-201ENST00000317610 PTAR1Q7Z6K3 402 aaPredicted RBP19.26■□□□□ 0.67
RTN4-201ENST00000317610 ERO1BQ86YB8 467 aa19.26■□□□□ 0.67
RTN4-201ENST00000317610 PBXIP1Q96AQ6 731 aa19.26■□□□□ 0.67
RTN4-201ENST00000317610 CCDC126Q96EE4 140 aa19.26■□□□□ 0.67
RTN4-201ENST00000317610 ELMO2Q96JJ3 720 aa19.26■□□□□ 0.67
RTN4-201ENST00000317610 EML4Q9HC35 981 aaKnown RBP19.26■□□□□ 0.67
RTN4-201ENST00000317610 OR12D3Q9UGF7 316 aa19.26■□□□□ 0.67
RTN4-201ENST00000317610 TCAF1Q9Y4C2 921 aa19.26■□□□□ 0.67
RTN4-201ENST00000317610 SNX10Q9Y5X0 201 aa19.26■□□□□ 0.67
RTN4-201ENST00000317610 COL4A4P53420 1690 aaPredicted RBP19.26■□□□□ 0.67
RTN4-201ENST00000317610 BMP10O95393 424 aa19.26■□□□□ 0.67
RTN4-201ENST00000317610 F9P00740 461 aa19.26■□□□□ 0.67
RTN4-201ENST00000317610 NCAM1P13591 858 aa19.26■□□□□ 0.67
RTN4-201ENST00000317610 DARSP14868 501 aaKnown RBP19.26■□□□□ 0.67
RTN4-201ENST00000317610 AXLP30530 894 aa19.26■□□□□ 0.67
RTN4-201ENST00000317610 CD151P48509 253 aa19.26■□□□□ 0.67
RTN4-201ENST00000317610 CXCR3P49682 368 aa19.26■□□□□ 0.67
RTN4-201ENST00000317610 RALGDSQ12967 914 aa19.26■□□□□ 0.67
RTN4-201ENST00000317610 POU6F1Q14863 301 aa19.26■□□□□ 0.67
RTN4-201ENST00000317610 RAB41Q5JT25 222 aa19.26■□□□□ 0.67
RTN4-201ENST00000317610 KIAA0319Q5VV43 1072 aa19.26■□□□□ 0.67
RTN4-201ENST00000317610 PPP4R4Q6NUP7 873 aa19.26■□□□□ 0.67
RTN4-201ENST00000317610 DHRS4L2Q6PKH6 230 aa19.26■□□□□ 0.67
RTN4-201ENST00000317610 POTEHQ6S545 545 aa19.26■□□□□ 0.67
RTN4-201ENST00000317610 PPHLN1Q8NEY8 458 aaKnown RBP19.26■□□□□ 0.67
RTN4-201ENST00000317610 SPATA22Q8NHS9 363 aa19.26■□□□□ 0.67
RTN4-201ENST00000317610 TMIGD2Q96BF3 282 aa19.26■□□□□ 0.67
RTN4-201ENST00000317610 RMND5BQ96G75 393 aaPredicted RBP19.26■□□□□ 0.67
RTN4-201ENST00000317610 MED10Q9BTT4 135 aa19.26■□□□□ 0.67
RTN4-201ENST00000317610 EFHD1Q9BUP0 239 aa19.26■□□□□ 0.67
RTN4-201ENST00000317610 SLC25A23Q9BV35 468 aa19.26■□□□□ 0.67
RTN4-201ENST00000317610 TNFRSF12AQ9NP84 129 aa19.26■□□□□ 0.67
RTN4-201ENST00000317610 TREX1Q9NSU2 369 aa19.26■□□□□ 0.67
RTN4-201ENST00000317610 DUS2Q9NX74 493 aaKnown RBP19.26■□□□□ 0.67
RTN4-201ENST00000317610 KCNH4Q9UQ05 1017 aa19.26■□□□□ 0.67
RTN4-201ENST00000317610 SNX13Q9Y5W8 968 aa19.26■□□□□ 0.67
RTN4-201ENST00000317610 NEMP2A6NFY4 417 aa19.25■□□□□ 0.67
RTN4-201ENST00000317610 BMP2P12643 396 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms