RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 GP5P40197 560 aa17.37■□□□□ 0.37
SCAMP4-201ENST00000316097 PGFP49763 221 aa17.37■□□□□ 0.37
SCAMP4-201ENST00000316097 CREB5Q02930 508 aa17.37■□□□□ 0.37
SCAMP4-201ENST00000316097 DSC1Q08554 894 aa17.37■□□□□ 0.37
SCAMP4-201ENST00000316097 FAM171BQ6P995 826 aa17.37■□□□□ 0.37
SCAMP4-201ENST00000316097 LPCAT2Q7L5N7 544 aa17.37■□□□□ 0.37
SCAMP4-201ENST00000316097 PGAM4Q8N0Y7 254 aa17.37■□□□□ 0.37
SCAMP4-201ENST00000316097 TMEM102Q8N9M5 508 aaPredicted RBP17.37■□□□□ 0.37
SCAMP4-201ENST00000316097 KCTD13Q8WZ19 329 aa17.37■□□□□ 0.37
SCAMP4-201ENST00000316097 DLG3Q92796 817 aa17.37■□□□□ 0.37
SCAMP4-201ENST00000316097 SUSD3Q96L08 255 aa17.37■□□□□ 0.37
SCAMP4-201ENST00000316097 MARK4Q96L34 752 aa17.37■□□□□ 0.37
SCAMP4-201ENST00000316097 QKIQ96PU8 341 aaKnown RBP eCLIP17.37■□□□□ 0.37
SCAMP4-201ENST00000316097 HAUS8Q9BT25 410 aa17.37■□□□□ 0.37
SCAMP4-201ENST00000316097 BEGAINQ9BUH8 593 aa17.37■□□□□ 0.37
SCAMP4-201ENST00000316097 CEP41Q9BYV8 373 aa17.37■□□□□ 0.37
SCAMP4-201ENST00000316097 ANLNQ9NQW6 1124 aa17.37■□□□□ 0.37
SCAMP4-201ENST00000316097 PIGVQ9NUD9 493 aa17.37■□□□□ 0.37
SCAMP4-201ENST00000316097 TDRKHQ9Y2W6 561 aaKnown RBP17.37■□□□□ 0.37
SCAMP4-201ENST00000316097 RNF11Q9Y3C5 154 aa17.37■□□□□ 0.37
SCAMP4-201ENST00000316097 G3V2L1 256 aa17.36■□□□□ 0.37
SCAMP4-201ENST00000316097 LTFP02788 710 aa17.36■□□□□ 0.37
SCAMP4-201ENST00000316097 NCAM1P13591 858 aa17.36■□□□□ 0.37
SCAMP4-201ENST00000316097 ZNF23P17027 643 aa17.36■□□□□ 0.37
SCAMP4-201ENST00000316097 ABCG1P45844 678 aa17.36■□□□□ 0.37
SCAMP4-201ENST00000316097 IRF9Q00978 393 aa17.36■□□□□ 0.37
SCAMP4-201ENST00000316097 YWHAHQ04917 246 aaPredicted RBP17.36■□□□□ 0.37
SCAMP4-201ENST00000316097 SLC25A52Q3SY17 297 aa17.36■□□□□ 0.37
SCAMP4-201ENST00000316097 TMEM198Q66K66 360 aa17.36■□□□□ 0.37
SCAMP4-201ENST00000316097 ERI1Q8IV48 349 aaKnown RBP17.36■□□□□ 0.37
SCAMP4-201ENST00000316097 CHERPQ8IWX8 916 aaKnown RBP17.36■□□□□ 0.37
SCAMP4-201ENST00000316097 SLC7A14Q8TBB6 771 aa17.36■□□□□ 0.37
SCAMP4-201ENST00000316097 SMARCD1Q96GM5 515 aa17.36■□□□□ 0.37
SCAMP4-201ENST00000316097 CNDP1Q96KN2 507 aa17.36■□□□□ 0.37
SCAMP4-201ENST00000316097 FAM193BQ96PV7 902 aaPredicted RBP17.36■□□□□ 0.37
SCAMP4-201ENST00000316097 KCTD15Q96SI1 283 aaPredicted RBP17.36■□□□□ 0.37
SCAMP4-201ENST00000316097 SEMA6AQ9H2E6 1030 aa17.36■□□□□ 0.37
SCAMP4-201ENST00000316097 SAGE1Q9NXZ1 904 aa17.36■□□□□ 0.37
SCAMP4-201ENST00000316097 MYO18AQ92614 2054 aaKnown RBP17.36■□□□□ 0.37
SCAMP4-201ENST00000316097 C7orf72A4D263 438 aa17.36■□□□□ 0.37
SCAMP4-201ENST00000316097 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.36■□□□□ 0.37
SCAMP4-201ENST00000316097 CYP11A1P05108 521 aa17.36■□□□□ 0.37
SCAMP4-201ENST00000316097 GOT1P17174 413 aa17.36■□□□□ 0.37
SCAMP4-201ENST00000316097 CCR10P46092 362 aa17.36■□□□□ 0.37
SCAMP4-201ENST00000316097 PRMT2P55345 433 aa17.36■□□□□ 0.37
SCAMP4-201ENST00000316097 DAOAP59103 153 aa17.36■□□□□ 0.37
SCAMP4-201ENST00000316097 ART3Q13508 389 aa17.36■□□□□ 0.37
SCAMP4-201ENST00000316097 DLG2Q15700 870 aa17.36■□□□□ 0.37
SCAMP4-201ENST00000316097 SLC39A12Q504Y0 691 aa17.36■□□□□ 0.37
SCAMP4-201ENST00000316097 PTAR1Q7Z6K3 402 aaPredicted RBP17.36■□□□□ 0.37
SCAMP4-201ENST00000316097 COLGALT1Q8NBJ5 622 aa17.36■□□□□ 0.37
SCAMP4-201ENST00000316097 ZSCAN18Q8TBC5 510 aaPredicted RBP17.36■□□□□ 0.37
SCAMP4-201ENST00000316097 FNDC8Q8TC99 324 aa17.36■□□□□ 0.37
SCAMP4-201ENST00000316097 GRIN3AQ8TCU5 1115 aa17.36■□□□□ 0.37
SCAMP4-201ENST00000316097 TMA16Q96EY4 203 aaKnown RBP17.36■□□□□ 0.37
SCAMP4-201ENST00000316097 GATA5Q9BWX5 397 aaPredicted RBP17.36■□□□□ 0.37
SCAMP4-201ENST00000316097 NUF2Q9BZD4 464 aa17.36■□□□□ 0.37
SCAMP4-201ENST00000316097 CAB39LQ9H9S4 337 aa17.36■□□□□ 0.37
SCAMP4-201ENST00000316097 EPS15L1Q9UBC2 864 aa17.36■□□□□ 0.37
SCAMP4-201ENST00000316097 VPS28Q9UK41 221 aa17.36■□□□□ 0.37
SCAMP4-201ENST00000316097 PCDHB7Q9Y5E2 793 aa17.36■□□□□ 0.37
SCAMP4-201ENST00000316097 MRPL42Q9Y6G3 142 aaKnown RBP17.36■□□□□ 0.37
SCAMP4-201ENST00000316097 I6L893 689 aaPredicted RBP17.35■□□□□ 0.37
SCAMP4-201ENST00000316097 TRIM13O60858 407 aa17.35■□□□□ 0.37
SCAMP4-201ENST00000316097 BCAS2O75934 225 aaPredicted RBP17.35■□□□□ 0.37
SCAMP4-201ENST00000316097 FAM163BP0C2L3 166 aa17.35■□□□□ 0.37
SCAMP4-201ENST00000316097 MLNP12872 115 aa17.35■□□□□ 0.37
SCAMP4-201ENST00000316097 ZNF26P17031 533 aaPredicted RBP17.35■□□□□ 0.37
SCAMP4-201ENST00000316097 NAB1Q13506 487 aa17.35■□□□□ 0.37
SCAMP4-201ENST00000316097 BFSP2Q13515 415 aa17.35■□□□□ 0.37
SCAMP4-201ENST00000316097 MGAT5BQ3V5L5 792 aa17.35■□□□□ 0.37
SCAMP4-201ENST00000316097 IL23RQ5VWK5 629 aa17.35■□□□□ 0.37
SCAMP4-201ENST00000316097 NXNQ6DKJ4 435 aa17.35■□□□□ 0.37
SCAMP4-201ENST00000316097 ABI1Q8IZP0 508 aa17.35■□□□□ 0.37
SCAMP4-201ENST00000316097 RIN3Q8TB24 985 aa17.35■□□□□ 0.37
SCAMP4-201ENST00000316097 HTR3CQ8WXA8 447 aa17.35■□□□□ 0.37
SCAMP4-201ENST00000316097 GFM2Q969S9 779 aaKnown RBP17.35■□□□□ 0.37
SCAMP4-201ENST00000316097 ATP6V1E2Q96A05 226 aa17.35■□□□□ 0.37
SCAMP4-201ENST00000316097 PKMYT1Q99640 499 aa17.35■□□□□ 0.37
SCAMP4-201ENST00000316097 ILKAPQ9H0C8 392 aaPredicted RBP17.35■□□□□ 0.37
SCAMP4-201ENST00000316097 CAAP1Q9H8G2 361 aa17.35■□□□□ 0.37
SCAMP4-201ENST00000316097 NUDT5Q9UKK9 219 aa17.35■□□□□ 0.37
SCAMP4-201ENST00000316097 ARHGEF37A1IGU5 675 aa17.35■□□□□ 0.37
SCAMP4-201ENST00000316097 TMEM114B3SHH9 223 aa17.35■□□□□ 0.37
SCAMP4-201ENST00000316097 MDM4O15151 490 aa17.35■□□□□ 0.37
SCAMP4-201ENST00000316097 COQ9O75208 318 aa17.35■□□□□ 0.37
SCAMP4-201ENST00000316097 TADA2AO75478 443 aa17.35■□□□□ 0.37
SCAMP4-201ENST00000316097 STT3AP46977 705 aa17.35■□□□□ 0.37
SCAMP4-201ENST00000316097 CDK9P50750 372 aaKnown RBP17.35■□□□□ 0.37
SCAMP4-201ENST00000316097 SFSWAPQ12872 951 aaKnown RBP17.35■□□□□ 0.37
SCAMP4-201ENST00000316097 POTEHQ6S545 545 aa17.35■□□□□ 0.37
SCAMP4-201ENST00000316097 TMCO2Q7Z6W1 182 aaPredicted RBP17.35■□□□□ 0.37
SCAMP4-201ENST00000316097 URGCPQ8TCY9 931 aa17.35■□□□□ 0.37
SCAMP4-201ENST00000316097 GPR152Q8TDT2 470 aa17.35■□□□□ 0.37
SCAMP4-201ENST00000316097 SREK1Q8WXA9 508 aaKnown RBP17.35■□□□□ 0.37
SCAMP4-201ENST00000316097 CERS2Q96G23 380 aa17.35■□□□□ 0.37
SCAMP4-201ENST00000316097 TMEM165Q9HC07 324 aa17.35■□□□□ 0.37
SCAMP4-201ENST00000316097 A0A096LPK6 155 aa17.34■□□□□ 0.37
SCAMP4-201ENST00000316097 A0A0A0MRY4 1105 aa17.34■□□□□ 0.37
SCAMP4-201ENST00000316097 MATN2O00339 956 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms