RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 SPATA21Q7Z572 469 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 GRASPQ7Z6J2 395 aaPredicted RBP7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 TMEM25Q86YD3 366 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 LZTR1Q8N653 840 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 OTUD6BQ8N6M0 293 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 EFHBQ8N7U6 833 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 SPPL3Q8TCT6 385 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 LRRC8CQ8TDW0 803 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 SLC25A51Q9H1U9 297 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 CCDC134Q9H6E4 229 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 MAN1C1Q9NR34 630 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 VPS28Q9UK41 221 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 INTS6Q9UL03 887 aaKnown RBP7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 ACTL7BQ9Y614 415 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 TRIOBPQ9H2D6 2365 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 MOSPD3O75425 235 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 USP1O94782 785 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 PIGNO95427 931 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 GBP2P32456 591 aaPredicted RBP7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 ABL2P42684 1182 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 COG7P83436 770 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 NRG1Q02297 640 aaPredicted RBP7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 MPP3Q13368 585 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 PRPSAP1Q14558 356 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 VWA5B1Q5TIE3 1220 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 TMC5Q6UXY8 1006 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 CEP128Q6ZU80 1094 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 MARK2Q7KZI7 788 aaKnown RBP7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 CAMK1DQ8IU85 385 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 C10orf107Q8IVU9 208 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 CCDC197Q8NCU1 140 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 MDGA1Q8NFP4 955 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 TTC8Q8TAM2 541 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 SHKBP1Q8TBC3 707 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 C2orf15Q8WU43 125 aaKnown RBP7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 KCTD4Q8WVF5 259 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 EID2BQ96D98 161 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 TMEM237Q96Q45 408 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 OLFM1Q99784 485 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 LBHD1Q9BQE6 289 aaPredicted RBP7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 KIFC1Q9BW19 673 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 IL22Q9GZX6 179 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 MANSC1Q9H8J5 431 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 PRKAG2Q9UGJ0 569 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 TCAF1Q9Y4C2 921 aa7.07□□□□□ -1.28
LYSMD3-201ENST00000315948 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.06□□□□□ -1.28
LYSMD3-201ENST00000315948 EPOPA6NHQ4 379 aa7.06□□□□□ -1.28
LYSMD3-201ENST00000315948 LDB2O43679 373 aa7.06□□□□□ -1.28
LYSMD3-201ENST00000315948 PARNO95453 639 aaKnown RBP7.06□□□□□ -1.28
LYSMD3-201ENST00000315948 LRG1P02750 347 aa7.06□□□□□ -1.28
LYSMD3-201ENST00000315948 DHRS4L1P0CG22 281 aa7.06□□□□□ -1.28
LYSMD3-201ENST00000315948 ZNF177Q13360 481 aaPredicted RBP7.06□□□□□ -1.28
LYSMD3-201ENST00000315948 SNX30Q5VWJ9 437 aa7.06□□□□□ -1.28
LYSMD3-201ENST00000315948 FBXW10Q5XX13 1052 aa7.06□□□□□ -1.28
LYSMD3-201ENST00000315948 CLP1Q92989 425 aaKnown RBP7.06□□□□□ -1.28
LYSMD3-201ENST00000315948 SGSM3Q96HU1 749 aa7.06□□□□□ -1.28
LYSMD3-201ENST00000315948 VAT1Q99536 393 aa7.06□□□□□ -1.28
LYSMD3-201ENST00000315948 RBBP8Q99708 897 aa7.06□□□□□ -1.28
LYSMD3-201ENST00000315948 FEM1AQ9BSK4 669 aa7.06□□□□□ -1.28
LYSMD3-201ENST00000315948 SEZ6LQ9BYH1 1024 aa7.06□□□□□ -1.28
LYSMD3-201ENST00000315948 ARMCX1Q9P291 453 aa7.06□□□□□ -1.28
LYSMD3-201ENST00000315948 TXNDC16Q9P2K2 825 aa7.06□□□□□ -1.28
LYSMD3-201ENST00000315948 VPS51Q9UID3 782 aa7.06□□□□□ -1.28
LYSMD3-201ENST00000315948 AAR2Q9Y312 384 aaKnown RBP7.06□□□□□ -1.28
LYSMD3-201ENST00000315948 HBS1LQ9Y450 684 aaKnown RBP7.06□□□□□ -1.28
LYSMD3-201ENST00000315948 INSL6Q9Y581 213 aa7.06□□□□□ -1.28
LYSMD3-201ENST00000315948 ANKRD12Q6UB98 2062 aa7.06□□□□□ -1.28
LYSMD3-201ENST00000315948 EDF1O60869 148 aaKnown RBP7.06□□□□□ -1.28
LYSMD3-201ENST00000315948 KRT38O76015 456 aa7.06□□□□□ -1.28
LYSMD3-201ENST00000315948 TMCC1O94876 653 aa7.06□□□□□ -1.28
LYSMD3-201ENST00000315948 C2P06681 752 aa7.06□□□□□ -1.28
LYSMD3-201ENST00000315948 PLK1P53350 603 aa7.06□□□□□ -1.28
LYSMD3-201ENST00000315948 OXCT1P55809 520 aa7.06□□□□□ -1.28
LYSMD3-201ENST00000315948 CROCCP2Q86T23 111 aa7.06□□□□□ -1.28
LYSMD3-201ENST00000315948 ALYREFQ86V81 257 aaKnown RBP7.06□□□□□ -1.28
LYSMD3-201ENST00000315948 ZC3HC1Q86WB0 502 aaKnown RBP7.06□□□□□ -1.28
LYSMD3-201ENST00000315948 MRPL43Q8N983 215 aaKnown RBP7.06□□□□□ -1.28
LYSMD3-201ENST00000315948 LPCAT1Q8NF37 534 aa7.06□□□□□ -1.28
LYSMD3-201ENST00000315948 CCT6BQ92526 530 aa7.06□□□□□ -1.28
LYSMD3-201ENST00000315948 TMA16Q96EY4 203 aaKnown RBP7.06□□□□□ -1.28
LYSMD3-201ENST00000315948 EBF4Q9BQW3 602 aa7.06□□□□□ -1.28
LYSMD3-201ENST00000315948 IQCGQ9H095 443 aaKnown RBP7.06□□□□□ -1.28
LYSMD3-201ENST00000315948 TREX1Q9NSU2 369 aa7.06□□□□□ -1.28
LYSMD3-201ENST00000315948 GALPQ9UBC7 116 aa7.06□□□□□ -1.28
LYSMD3-201ENST00000315948 SMG5Q9UPR3 1016 aaKnown RBP7.06□□□□□ -1.28
LYSMD3-201ENST00000315948 A0A096LPK6 155 aa7.06□□□□□ -1.28
LYSMD3-201ENST00000315948 MTSS1O43312 755 aa7.06□□□□□ -1.28
LYSMD3-201ENST00000315948 SPAG6O75602 509 aa7.06□□□□□ -1.28
LYSMD3-201ENST00000315948 CBX6O95503 412 aa7.06□□□□□ -1.28
LYSMD3-201ENST00000315948 SBK3P0C264 359 aa7.06□□□□□ -1.28
LYSMD3-201ENST00000315948 BMPR1AP36894 532 aa7.06□□□□□ -1.28
LYSMD3-201ENST00000315948 CLCN4P51793 760 aa7.06□□□□□ -1.28
LYSMD3-201ENST00000315948 TRAF2Q12933 501 aa7.06□□□□□ -1.28
LYSMD3-201ENST00000315948 CDH18Q13634 790 aa7.06□□□□□ -1.28
LYSMD3-201ENST00000315948 TCEAL5Q5H9L2 206 aa7.06□□□□□ -1.28
LYSMD3-201ENST00000315948 SPANXN3Q5MJ09 141 aa7.06□□□□□ -1.28
LYSMD3-201ENST00000315948 C4orf22Q6V702 233 aa7.06□□□□□ -1.28
LYSMD3-201ENST00000315948 TEX26Q8N6G2 289 aa7.06□□□□□ -1.28
LYSMD3-201ENST00000315948 ITFG1Q8TB96 612 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms