RNA–Protein interactions for RNA: ENST00000312734.8

CGREF1-202, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CGREF1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-202ENST00000312734 TRAF2Q12933 501 aa27.53■■■□□ 2
CGREF1-202ENST00000312734 IFT20Q8IY31 132 aa27.53■■■□□ 2
CGREF1-202ENST00000312734 PAF1Q8N7H5 531 aa27.53■■■□□ 2
CGREF1-202ENST00000312734 NAT8LQ8N9F0 302 aa27.53■■■□□ 2
CGREF1-202ENST00000312734 BBOF1Q8ND07 529 aa27.53■■■□□ 2
CGREF1-202ENST00000312734 FLCNQ8NFG4 579 aa27.53■■■□□ 2
CGREF1-202ENST00000312734 OR8D1Q8WZ84 308 aa27.53■■■□□ 2
CGREF1-202ENST00000312734 SEC14L1Q92503 715 aa27.53■■■□□ 2
CGREF1-202ENST00000312734 VOPP1Q96AW1 172 aa27.53■■■□□ 2
CGREF1-202ENST00000312734 FAM129BQ96TA1 746 aa27.53■■■□□ 2
CGREF1-202ENST00000312734 FICDQ9BVA6 458 aa27.53■■■□□ 2
CGREF1-202ENST00000312734 FSD1LQ9BXM9 530 aa27.53■■■□□ 2
CGREF1-202ENST00000312734 CPEB1Q9BZB8 566 aaKnown RBP27.53■■■□□ 2
CGREF1-202ENST00000312734 GDF3Q9NR23 364 aa27.53■■■□□ 2
CGREF1-202ENST00000312734 UGT2B4P06133 528 aa27.52■■■□□ 2
CGREF1-202ENST00000312734 ELAVL3Q14576 367 aaKnown RBP27.52■■■□□ 2
CGREF1-202ENST00000312734 STARD3Q14849 445 aa27.52■■■□□ 2
CGREF1-202ENST00000312734 HIBCHQ6NVY1 386 aaPredicted RBP27.52■■■□□ 2
CGREF1-202ENST00000312734 SYNPOQ8N3V7 929 aa27.52■■■□□ 2
CGREF1-202ENST00000312734 IFT43Q96FT9 208 aa27.52■■■□□ 2
CGREF1-202ENST00000312734 MFSD1Q9H3U5 465 aa27.52■■■□□ 2
CGREF1-202ENST00000312734 LRRC40Q9H9A6 602 aa27.52■■■□□ 2
CGREF1-202ENST00000312734 FAM114A2Q9NRY5 505 aa27.52■■■□□ 2
CGREF1-202ENST00000312734 TMEM63AO94886 807 aa27.52■■■□□ 2
CGREF1-202ENST00000312734 COL9A1P20849 921 aa27.52■■■□□ 2
CGREF1-202ENST00000312734 SERPINA4P29622 427 aa27.52■■■□□ 2
CGREF1-202ENST00000312734 GRIA1P42261 906 aa27.52■■■□□ 2
CGREF1-202ENST00000312734 CARSP49589 748 aaKnown RBP27.52■■■□□ 2
CGREF1-202ENST00000312734 CDK18Q07002 472 aa27.52■■■□□ 2
CGREF1-202ENST00000312734 CAMK2GQ13555 558 aaPredicted RBP27.52■■■□□ 2
CGREF1-202ENST00000312734 POM121L1PQ3SYA9 428 aa27.52■■■□□ 2
CGREF1-202ENST00000312734 EOGTQ5NDL2 527 aa27.52■■■□□ 2
CGREF1-202ENST00000312734 GDPD4Q6W3E5 623 aa27.52■■■□□ 2
CGREF1-202ENST00000312734 KLHDC8BQ8IXV7 354 aa27.52■■■□□ 2
CGREF1-202ENST00000312734 TUBGCP5Q96RT8 1024 aa27.52■■■□□ 2
CGREF1-202ENST00000312734 TDRD1Q9BXT4 1180 aaKnown RBP27.52■■■□□ 2
CGREF1-202ENST00000312734 PIH1D1Q9NWS0 290 aaKnown RBP27.52■■■□□ 2
CGREF1-202ENST00000312734 A0A1W2PQF6 199 aa27.51■■□□□ 1.99
CGREF1-202ENST00000312734 ERI2A8K979 691 aaKnown RBP27.51■■□□□ 1.99
CGREF1-202ENST00000312734 TP73O15350 636 aa27.51■■□□□ 1.99
CGREF1-202ENST00000312734 PDHA1P08559 390 aa27.51■■□□□ 1.99
CGREF1-202ENST00000312734 TPSB2P20231 275 aa27.51■■□□□ 1.99
CGREF1-202ENST00000312734 MAGEA6P43360 314 aa27.51■■□□□ 1.99
CGREF1-202ENST00000312734 MORF4L2Q15014 288 aa27.51■■□□□ 1.99
CGREF1-202ENST00000312734 TPSAB1Q15661 275 aa27.51■■□□□ 1.99
CGREF1-202ENST00000312734 HSF5Q4G112 596 aaPredicted RBP27.51■■□□□ 1.99
CGREF1-202ENST00000312734 TRIM67Q6ZTA4 783 aa27.51■■□□□ 1.99
CGREF1-202ENST00000312734 MMAAQ8IVH4 418 aaKnown RBP27.51■■□□□ 1.99
CGREF1-202ENST00000312734 SLC25A41Q8N5S1 370 aa27.51■■□□□ 1.99
CGREF1-202ENST00000312734 PJA1Q8NG27 643 aa27.51■■□□□ 1.99
CGREF1-202ENST00000312734 PRCCQ92733 491 aaPredicted RBP27.51■■□□□ 1.99
CGREF1-202ENST00000312734 KLHL32Q96NJ5 620 aa27.51■■□□□ 1.99
CGREF1-202ENST00000312734 TBL1YQ9BQ87 522 aa27.51■■□□□ 1.99
CGREF1-202ENST00000312734 SUV39H2Q9H5I1 410 aa27.51■■□□□ 1.99
CGREF1-202ENST00000312734 EIF2B3Q9NR50 452 aaKnown RBP27.51■■□□□ 1.99
CGREF1-202ENST00000312734 SARDHQ9UL12 918 aa27.51■■□□□ 1.99
CGREF1-202ENST00000312734 MMP17Q9ULZ9 603 aa27.51■■□□□ 1.99
CGREF1-202ENST00000312734 PCDHB9Q9Y5E1 797 aa27.51■■□□□ 1.99
CGREF1-202ENST00000312734 PDGFBP01127 241 aaPredicted RBP27.5■■□□□ 1.99
CGREF1-202ENST00000312734 IL1BP01584 269 aa27.5■■□□□ 1.99
CGREF1-202ENST00000312734 HLTFQ14527 1009 aaKnown RBP eCLIP27.5■■□□□ 1.99
CGREF1-202ENST00000312734 GRM3Q14832 879 aa27.5■■□□□ 1.99
CGREF1-202ENST00000312734 ART4Q93070 314 aa27.5■■□□□ 1.99
CGREF1-202ENST00000312734 SIT1Q9Y3P8 196 aa27.5■■□□□ 1.99
CGREF1-202ENST00000312734 TRAFD1O14545 582 aaPredicted RBP27.49■■□□□ 1.99
CGREF1-202ENST00000312734 ADRA1AP35348 466 aa27.49■■□□□ 1.99
CGREF1-202ENST00000312734 CHRNA4P43681 627 aa27.49■■□□□ 1.99
CGREF1-202ENST00000312734 TNNT3P45378 269 aaPredicted RBP27.49■■□□□ 1.99
CGREF1-202ENST00000312734 MTM1Q13496 603 aa27.49■■□□□ 1.99
CGREF1-202ENST00000312734 GAS6Q14393 721 aa27.49■■□□□ 1.99
CGREF1-202ENST00000312734 GALNT3Q14435 633 aa27.49■■□□□ 1.99
CGREF1-202ENST00000312734 SLC14A2Q15849 920 aa27.49■■□□□ 1.99
CGREF1-202ENST00000312734 ZDHHC24Q6UX98 284 aa27.49■■□□□ 1.99
CGREF1-202ENST00000312734 TMEM92Q6UXU6 159 aa27.49■■□□□ 1.99
CGREF1-202ENST00000312734 PPP1R21Q6ZMI0 780 aa27.49■■□□□ 1.99
CGREF1-202ENST00000312734 HOOK3Q86VS8 718 aa27.49■■□□□ 1.99
CGREF1-202ENST00000312734 CACUL1Q86Y37 369 aa27.49■■□□□ 1.99
CGREF1-202ENST00000312734 OR52K1Q8NGK4 314 aa27.49■■□□□ 1.99
CGREF1-202ENST00000312734 PIP4K2CQ8TBX8 421 aa27.49■■□□□ 1.99
CGREF1-202ENST00000312734 FBXO25Q8TCJ0 367 aa27.49■■□□□ 1.99
CGREF1-202ENST00000312734 PWWP2AQ96N64 755 aa27.49■■□□□ 1.99
CGREF1-202ENST00000312734 PPM1HQ9ULR3 514 aa27.49■■□□□ 1.99
CGREF1-202ENST00000312734 SUN1O94901 812 aa27.49■■□□□ 1.99
CGREF1-202ENST00000312734 PRNPP04156 253 aa27.49■■□□□ 1.99
CGREF1-202ENST00000312734 DCNP07585 359 aaKnown RBP27.49■■□□□ 1.99
CGREF1-202ENST00000312734 CA4P22748 312 aa27.49■■□□□ 1.99
CGREF1-202ENST00000312734 CDK16Q00536 496 aa27.49■■□□□ 1.99
CGREF1-202ENST00000312734 ARMC12Q5T9G4 340 aa27.49■■□□□ 1.99
CGREF1-202ENST00000312734 NAPEPLDQ6IQ20 393 aa27.49■■□□□ 1.99
CGREF1-202ENST00000312734 DSG4Q86SJ6 1040 aa27.49■■□□□ 1.99
CGREF1-202ENST00000312734 MYRIPQ8NFW9 859 aa27.49■■□□□ 1.99
CGREF1-202ENST00000312734 LRIG1Q96JA1 1093 aa27.49■■□□□ 1.99
CGREF1-202ENST00000312734 FEM1CQ96JP0 617 aa27.49■■□□□ 1.99
CGREF1-202ENST00000312734 ZNF641Q96N77 438 aaPredicted RBP27.49■■□□□ 1.99
CGREF1-202ENST00000312734 NEUROG2Q9H2A3 272 aa27.49■■□□□ 1.99
CGREF1-202ENST00000312734 LOC285095A0A1B0GVY8 99 aa27.48■■□□□ 1.99
CGREF1-202ENST00000312734 KPNA3O00505 521 aaPredicted RBP27.48■■□□□ 1.99
CGREF1-202ENST00000312734 NDC80O14777 642 aa27.48■■□□□ 1.99
CGREF1-202ENST00000312734 ALOX15BO15296 676 aa27.48■■□□□ 1.99
CGREF1-202ENST00000312734 HTRA2O43464 458 aaPredicted RBP27.48■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms