RNA–Protein interactions for RNA: ENST00000310260.7

VANGL1-201, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VANGL1, Length 2,265 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-201ENST00000310260 ICA1LQ8NDH6 482 aa12.86□□□□□ -0.35
VANGL1-201ENST00000310260 CEP295NLQ96MC4 621 aa12.86□□□□□ -0.35
VANGL1-201ENST00000310260 MCEEQ96PE7 176 aa12.86□□□□□ -0.35
VANGL1-201ENST00000310260 TMEM121Q9BTD3 319 aa12.86□□□□□ -0.35
VANGL1-201ENST00000310260 MRPS26Q9BYN8 205 aaKnown RBP12.86□□□□□ -0.35
VANGL1-201ENST00000310260 RNF38Q9H0F5 515 aa12.86□□□□□ -0.35
VANGL1-201ENST00000310260 WDR6Q9NNW5 1121 aaKnown RBP12.86□□□□□ -0.35
VANGL1-201ENST00000310260 ARHGEF38Q9NXL2 777 aa12.86□□□□□ -0.35
VANGL1-201ENST00000310260 PLK2Q9NYY3 685 aa12.86□□□□□ -0.35
VANGL1-201ENST00000310260 MARCOQ9UEW3 520 aaPredicted RBP12.86□□□□□ -0.35
VANGL1-201ENST00000310260 SFMBT1Q9UHJ3 866 aa12.86□□□□□ -0.35
VANGL1-201ENST00000310260 PCDHGB4Q9UN71 923 aa12.86□□□□□ -0.35
VANGL1-201ENST00000310260 DRG1Q9Y295 367 aaKnown RBP12.86□□□□□ -0.35
VANGL1-201ENST00000310260 USTQ9Y2C2 406 aa12.86□□□□□ -0.35
VANGL1-201ENST00000310260 HBS1LQ9Y450 684 aaKnown RBP12.86□□□□□ -0.35
VANGL1-201ENST00000310260 PCDHGB5Q9Y5G0 923 aa12.86□□□□□ -0.35
VANGL1-201ENST00000310260 IQANK1A0A1B0GTG1 560 aa12.86□□□□□ -0.35
VANGL1-201ENST00000310260 CAPN8A6NHC0 703 aa12.86□□□□□ -0.35
VANGL1-201ENST00000310260 DENRO43583 198 aaKnown RBP12.86□□□□□ -0.35
VANGL1-201ENST00000310260 PDE5AO76074 875 aa12.86□□□□□ -0.35
VANGL1-201ENST00000310260 CKMP06732 381 aa12.86□□□□□ -0.35
VANGL1-201ENST00000310260 ITGAVP06756 1048 aa12.86□□□□□ -0.35
VANGL1-201ENST00000310260 PMLP29590 882 aa12.86□□□□□ -0.35
VANGL1-201ENST00000310260 RFC1P35251 1148 aaPredicted RBP12.86□□□□□ -0.35
VANGL1-201ENST00000310260 RPL34P49207 117 aaKnown RBP12.86□□□□□ -0.35
VANGL1-201ENST00000310260 SERPINB8P50452 374 aa12.86□□□□□ -0.35
VANGL1-201ENST00000310260 PHEXP78562 749 aa12.86□□□□□ -0.35
VANGL1-201ENST00000310260 MTM1Q13496 603 aa12.86□□□□□ -0.35
VANGL1-201ENST00000310260 APOFQ13790 326 aa12.86□□□□□ -0.35
VANGL1-201ENST00000310260 ATP13A4Q4VNC1 1196 aa12.86□□□□□ -0.35
VANGL1-201ENST00000310260 KLHL35Q6PF15 583 aa12.86□□□□□ -0.35
VANGL1-201ENST00000310260 MFSD7Q6UXD7 560 aa12.86□□□□□ -0.35
VANGL1-201ENST00000310260 ISLR2Q6UXK2 745 aa12.86□□□□□ -0.35
VANGL1-201ENST00000310260 DEFB106AQ8N104 65 aa12.86□□□□□ -0.35
VANGL1-201ENST00000310260 CEP70Q8NHQ1 597 aa12.86□□□□□ -0.35
VANGL1-201ENST00000310260 JOSD2Q8TAC2 188 aa12.86□□□□□ -0.35
VANGL1-201ENST00000310260 FNDC8Q8TC99 324 aa12.86□□□□□ -0.35
VANGL1-201ENST00000310260 CPT1BQ92523 772 aa12.86□□□□□ -0.35
VANGL1-201ENST00000310260 FGF13Q92913 245 aa12.86□□□□□ -0.35
VANGL1-201ENST00000310260 NKD2Q969F2 451 aaPredicted RBP12.86□□□□□ -0.35
VANGL1-201ENST00000310260 SRPK1Q96SB4 655 aaKnown RBP12.86□□□□□ -0.35
VANGL1-201ENST00000310260 SLC46A2Q9BY10 475 aa12.86□□□□□ -0.35
VANGL1-201ENST00000310260 ZNF395Q9H8N7 513 aaPredicted RBP12.86□□□□□ -0.35
VANGL1-201ENST00000310260 PARVAQ9NVD7 372 aa12.86□□□□□ -0.35
VANGL1-201ENST00000310260 SGK1O00141 431 aa12.85□□□□□ -0.35
VANGL1-201ENST00000310260 MOSPD3O75425 235 aa12.85□□□□□ -0.35
VANGL1-201ENST00000310260 IFNB1P01574 187 aa12.85□□□□□ -0.35
VANGL1-201ENST00000310260 ATP5BP06576 529 aaKnown RBP12.85□□□□□ -0.35
VANGL1-201ENST00000310260 IRF1P10914 325 aa12.85□□□□□ -0.35
VANGL1-201ENST00000310260 PDGFRAP16234 1089 aa12.85□□□□□ -0.35
VANGL1-201ENST00000310260 MTHFRP42898 656 aa12.85□□□□□ -0.35
VANGL1-201ENST00000310260 NME3Q13232 169 aa12.85□□□□□ -0.35
VANGL1-201ENST00000310260 MAMLD1Q13495 774 aa12.85□□□□□ -0.35
VANGL1-201ENST00000310260 CDO1Q16878 200 aa12.85□□□□□ -0.35
VANGL1-201ENST00000310260 GRAMD1BQ3KR37 738 aa12.85□□□□□ -0.35
VANGL1-201ENST00000310260 RALGPS1Q5JS13 557 aa12.85□□□□□ -0.35
VANGL1-201ENST00000310260 PTCRAQ6ISU1 281 aaPredicted RBP12.85□□□□□ -0.35
VANGL1-201ENST00000310260 NAT8LQ8N9F0 302 aa12.85□□□□□ -0.35
VANGL1-201ENST00000310260 PDZD8Q8NEN9 1154 aa12.85□□□□□ -0.35
VANGL1-201ENST00000310260 SLC35B4Q969S0 331 aa12.85□□□□□ -0.35
VANGL1-201ENST00000310260 CCDC124Q96CT7 223 aaKnown RBP12.85□□□□□ -0.35
VANGL1-201ENST00000310260 PHF12Q96QT6 1004 aa12.85□□□□□ -0.35
VANGL1-201ENST00000310260 POPDC2Q9HBU9 364 aa12.85□□□□□ -0.35
VANGL1-201ENST00000310260 PCDH18Q9HCL0 1135 aa12.85□□□□□ -0.35
VANGL1-201ENST00000310260 GKN1Q9NS71 199 aa12.85□□□□□ -0.35
VANGL1-201ENST00000310260 COMMD8Q9NX08 183 aa12.85□□□□□ -0.35
VANGL1-201ENST00000310260 FAM92AA1XBS5 289 aa12.85□□□□□ -0.35
VANGL1-201ENST00000310260 SDR42E2A6NKP2 422 aa12.85□□□□□ -0.35
VANGL1-201ENST00000310260 MSI1O43347 362 aaKnown RBP12.85□□□□□ -0.35
VANGL1-201ENST00000310260 COCHO43405 550 aa12.85□□□□□ -0.35
VANGL1-201ENST00000310260 TMEM63AO94886 807 aa12.85□□□□□ -0.35
VANGL1-201ENST00000310260 KRT1P04264 644 aa12.85□□□□□ -0.35
VANGL1-201ENST00000310260 FYNP06241 537 aa12.85□□□□□ -0.35
VANGL1-201ENST00000310260 MBL2P11226 248 aaPredicted RBP12.85□□□□□ -0.35
VANGL1-201ENST00000310260 EPHB1P54762 984 aa12.85□□□□□ -0.35
VANGL1-201ENST00000310260 PITX1P78337 314 aaPredicted RBP12.85□□□□□ -0.35
VANGL1-201ENST00000310260 TMPRSS15P98073 1019 aa12.85□□□□□ -0.35
VANGL1-201ENST00000310260 PRSS36Q5K4E3 855 aa12.85□□□□□ -0.35
VANGL1-201ENST00000310260 PGM2L1Q6PCE3 622 aa12.85□□□□□ -0.35
VANGL1-201ENST00000310260 BORAQ6PGQ7 559 aa12.85□□□□□ -0.35
VANGL1-201ENST00000310260 TRIM67Q6ZTA4 783 aa12.85□□□□□ -0.35
VANGL1-201ENST00000310260 PPIL6Q8IXY8 311 aa12.85□□□□□ -0.35
VANGL1-201ENST00000310260 SLC44A1Q8WWI5 657 aa12.85□□□□□ -0.35
VANGL1-201ENST00000310260 KHSRPQ92945 711 aaKnown RBP eCLIP12.85□□□□□ -0.353e-6■■■■□ 19.6
VANGL1-201ENST00000310260 HSPBAP1Q96EW2 488 aa12.85□□□□□ -0.35
VANGL1-201ENST00000310260 DCUN1D1Q96GG9 259 aa12.85□□□□□ -0.35
VANGL1-201ENST00000310260 VCPIP1Q96JH7 1222 aa12.85□□□□□ -0.35
VANGL1-201ENST00000310260 EBF4Q9BQW3 602 aa12.85□□□□□ -0.35
VANGL1-201ENST00000310260 ZNF696Q9H7X3 374 aa12.85□□□□□ -0.35
VANGL1-201ENST00000310260 ABCC13Q9NSE7 274 aa12.85□□□□□ -0.35
VANGL1-201ENST00000310260 TBCCD1Q9NVR7 557 aa12.85□□□□□ -0.35
VANGL1-201ENST00000310260 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.85□□□□□ -0.35
VANGL1-201ENST00000310260 SIRPGQ9P1W8 387 aa12.85□□□□□ -0.35
VANGL1-201ENST00000310260 DTNAQ9Y4J8 743 aa12.85□□□□□ -0.35
VANGL1-201ENST00000310260 MBTPS2O43462 519 aa12.84□□□□□ -0.35
VANGL1-201ENST00000310260 DNAJA2O60884 412 aa12.84□□□□□ -0.35
VANGL1-201ENST00000310260 SUPT3HO75486 399 aa12.84□□□□□ -0.35
VANGL1-201ENST00000310260 FGF19O95750 216 aa12.84□□□□□ -0.35
VANGL1-201ENST00000310260 KITP10721 976 aa12.84□□□□□ -0.35
VANGL1-201ENST00000310260 ATP6V1B1P15313 513 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms