RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 GLP2RO95838 553 aa6.06□□□□□ -1.44
SEC22A-201ENST00000309934 IGHA2P01877 340 aa6.06□□□□□ -1.44
SEC22A-201ENST00000309934 HMBSP08397 361 aa6.06□□□□□ -1.44
SEC22A-201ENST00000309934 CTSAP10619 480 aa6.06□□□□□ -1.44
SEC22A-201ENST00000309934 SOX11P35716 441 aa6.06□□□□□ -1.44
SEC22A-201ENST00000309934 ELK3P41970 407 aa6.06□□□□□ -1.44
SEC22A-201ENST00000309934 SLCO1A2P46721 670 aa6.06□□□□□ -1.44
SEC22A-201ENST00000309934 SUOXP51687 545 aa6.06□□□□□ -1.44
SEC22A-201ENST00000309934 CRY1Q16526 586 aa6.06□□□□□ -1.44
SEC22A-201ENST00000309934 CLLU1OSQ5K130 101 aa6.06□□□□□ -1.44
SEC22A-201ENST00000309934 TMEM63BQ5T3F8 832 aa6.06□□□□□ -1.44
SEC22A-201ENST00000309934 RBM20Q5T481 1227 aaKnown RBP6.06□□□□□ -1.44
SEC22A-201ENST00000309934 DAB2IPQ5VWQ8 1189 aa6.06□□□□□ -1.44
SEC22A-201ENST00000309934 AFTPHQ6ULP2 937 aa6.06□□□□□ -1.44
SEC22A-201ENST00000309934 UMODL1-AS1Q8N2C9 162 aa6.06□□□□□ -1.44
SEC22A-201ENST00000309934 KREMEN2Q8NCW0 462 aa6.06□□□□□ -1.44
SEC22A-201ENST00000309934 HDAC2Q92769 488 aaKnown RBP6.06□□□□□ -1.44
SEC22A-201ENST00000309934 MCUR1Q96AQ8 359 aa6.06□□□□□ -1.44
SEC22A-201ENST00000309934 TIFAQ96CG3 184 aa6.06□□□□□ -1.44
SEC22A-201ENST00000309934 ZNF333Q96JL9 665 aa6.06□□□□□ -1.44
SEC22A-201ENST00000309934 FEM1CQ96JP0 617 aa6.06□□□□□ -1.44
SEC22A-201ENST00000309934 TEKT5Q96M29 485 aa6.06□□□□□ -1.44
SEC22A-201ENST00000309934 TGS1Q96RS0 853 aaKnown RBP6.06□□□□□ -1.44
SEC22A-201ENST00000309934 FICDQ9BVA6 458 aa6.06□□□□□ -1.44
SEC22A-201ENST00000309934 CAAP1Q9H8G2 361 aa6.06□□□□□ -1.44
SEC22A-201ENST00000309934 ZDHHC7Q9NXF8 308 aa6.06□□□□□ -1.44
SEC22A-201ENST00000309934 APPL1Q9UKG1 709 aa6.06□□□□□ -1.44
SEC22A-201ENST00000309934 RIMKLBQ9ULI2 386 aa6.06□□□□□ -1.44
SEC22A-201ENST00000309934 RBMX2Q9Y388 322 aaKnown RBP6.06□□□□□ -1.44
SEC22A-201ENST00000309934 PRPF4O43172 522 aaKnown RBP eCLIP6.06□□□□□ -1.44
SEC22A-201ENST00000309934 VPS26AO75436 327 aa6.06□□□□□ -1.44
SEC22A-201ENST00000309934 POU2F2P09086 479 aa6.06□□□□□ -1.44
SEC22A-201ENST00000309934 HOXA9P31269 272 aa6.06□□□□□ -1.44
SEC22A-201ENST00000309934 TMPRSS15P98073 1019 aa6.06□□□□□ -1.44
SEC22A-201ENST00000309934 DDR2Q16832 855 aa6.06□□□□□ -1.44
SEC22A-201ENST00000309934 ARMC12Q5T9G4 340 aa6.06□□□□□ -1.44
SEC22A-201ENST00000309934 ERAP2Q6P179 960 aa6.06□□□□□ -1.44
SEC22A-201ENST00000309934 PRUNE1Q86TP1 453 aa6.06□□□□□ -1.44
SEC22A-201ENST00000309934 ANKMY2Q8IV38 441 aa6.06□□□□□ -1.44
SEC22A-201ENST00000309934 CDC26Q8NHZ8 85 aa6.06□□□□□ -1.44
SEC22A-201ENST00000309934 CLIP3Q96DZ5 547 aa6.06□□□□□ -1.44
SEC22A-201ENST00000309934 RIPOR3Q96MK2 946 aa6.06□□□□□ -1.44
SEC22A-201ENST00000309934 ATP13A3Q9H7F0 1226 aa6.06□□□□□ -1.44
SEC22A-201ENST00000309934 WDR6Q9NNW5 1121 aaKnown RBP6.06□□□□□ -1.44
SEC22A-201ENST00000309934 GRHL1Q9NZI5 618 aa6.06□□□□□ -1.44
SEC22A-201ENST00000309934 PDP2Q9P2J9 529 aa6.06□□□□□ -1.44
SEC22A-201ENST00000309934 SORCS3Q9UPU3 1222 aa6.06□□□□□ -1.44
SEC22A-201ENST00000309934 L3MBTL1Q9Y468 752 aa6.06□□□□□ -1.44
SEC22A-201ENST00000309934 E5RI56 91 aa6.06□□□□□ -1.44
SEC22A-201ENST00000309934 NPC1O15118 1278 aa6.06□□□□□ -1.44
SEC22A-201ENST00000309934 ATP9BO43861 1147 aa6.06□□□□□ -1.44
SEC22A-201ENST00000309934 LRIG2O94898 1065 aa6.06□□□□□ -1.44
SEC22A-201ENST00000309934 PAPSS2O95340 614 aaPredicted RBP6.06□□□□□ -1.44
SEC22A-201ENST00000309934 HSPA4LO95757 839 aa6.06□□□□□ -1.44
SEC22A-201ENST00000309934 KRT16P08779 473 aa6.06□□□□□ -1.44
SEC22A-201ENST00000309934 PIK3CGP48736 1102 aa6.06□□□□□ -1.44
SEC22A-201ENST00000309934 CENPAP49450 140 aa6.06□□□□□ -1.44
SEC22A-201ENST00000309934 WNT7BP56706 349 aa6.06□□□□□ -1.44
SEC22A-201ENST00000309934 SMAD3P84022 425 aaKnown RBP6.06□□□□□ -1.44
SEC22A-201ENST00000309934 LLGL1Q15334 1064 aa6.06□□□□□ -1.44
SEC22A-201ENST00000309934 ADGRF1Q5T601 910 aa6.06□□□□□ -1.44
SEC22A-201ENST00000309934 TTC23LQ6PF05 361 aa6.06□□□□□ -1.44
SEC22A-201ENST00000309934 PACS1Q6VY07 963 aa6.06□□□□□ -1.44
SEC22A-201ENST00000309934 USP45Q70EL2 814 aa6.06□□□□□ -1.44
SEC22A-201ENST00000309934 PATL1Q86TB9 770 aaKnown RBP6.06□□□□□ -1.44
SEC22A-201ENST00000309934 CARNMT1Q8N4J0 409 aa6.06□□□□□ -1.44
SEC22A-201ENST00000309934 CPA6Q8N4T0 437 aa6.06□□□□□ -1.44
SEC22A-201ENST00000309934 SMYD1Q8NB12 490 aa6.06□□□□□ -1.44
SEC22A-201ENST00000309934 OR6P1Q8NGX9 317 aa6.06□□□□□ -1.44
SEC22A-201ENST00000309934 ZFPM2Q8WW38 1151 aa6.06□□□□□ -1.44
SEC22A-201ENST00000309934 MRRFQ96E11 262 aaKnown RBP6.06□□□□□ -1.44
SEC22A-201ENST00000309934 PAWRQ96IZ0 340 aaKnown RBP6.06□□□□□ -1.44
SEC22A-201ENST00000309934 FOPNLQ96NB1 174 aa6.06□□□□□ -1.44
SEC22A-201ENST00000309934 PGLYRP2Q96PD5 576 aa6.06□□□□□ -1.44
SEC22A-201ENST00000309934 GPR63Q9BZJ6 419 aa6.06□□□□□ -1.44
SEC22A-201ENST00000309934 SEMA4AQ9H3S1 761 aa6.06□□□□□ -1.44
SEC22A-201ENST00000309934 NT5MQ9NPB1 228 aa6.06□□□□□ -1.44
SEC22A-201ENST00000309934 STOML1Q9UBI4 398 aa6.06□□□□□ -1.44
SEC22A-201ENST00000309934 INSL5Q9Y5Q6 135 aa6.06□□□□□ -1.44
SEC22A-201ENST00000309934 GPC6Q9Y625 555 aaPredicted RBP6.06□□□□□ -1.44
SEC22A-201ENST00000309934 ZFP37Q9Y6Q3 630 aaPredicted RBP6.06□□□□□ -1.44
SEC22A-201ENST00000309934 ATXN2Q99700 1313 aaKnown RBP6.05□□□□□ -1.44
SEC22A-201ENST00000309934 E2F8A0AVK6 867 aa6.05□□□□□ -1.44
SEC22A-201ENST00000309934 TMEM120BA0PK00 339 aa6.05□□□□□ -1.44
SEC22A-201ENST00000309934 TRPC5OSA6NMA1 111 aa6.05□□□□□ -1.44
SEC22A-201ENST00000309934 DGKIO75912 1065 aa6.05□□□□□ -1.44
SEC22A-201ENST00000309934 GJB6O95452 261 aa6.05□□□□□ -1.44
SEC22A-201ENST00000309934 MYL2P10916 166 aa6.05□□□□□ -1.44
SEC22A-201ENST00000309934 CHN1P15882 459 aa6.05□□□□□ -1.44
SEC22A-201ENST00000309934 SKIV2L2P42285 1042 aaKnown RBP6.05□□□□□ -1.44
SEC22A-201ENST00000309934 AKR1D1P51857 326 aa6.05□□□□□ -1.44
SEC22A-201ENST00000309934 GNA12Q03113 381 aa6.05□□□□□ -1.44
SEC22A-201ENST00000309934 BCL2L1Q07817 233 aa6.05□□□□□ -1.44
SEC22A-201ENST00000309934 TWF1Q12792 350 aa6.05□□□□□ -1.44
SEC22A-201ENST00000309934 USP10Q14694 798 aaKnown RBP6.05□□□□□ -1.44
SEC22A-201ENST00000309934 MPP7Q5T2T1 576 aa6.05□□□□□ -1.44
SEC22A-201ENST00000309934 NCBP2-AS2Q69YL0 99 aa6.05□□□□□ -1.44
SEC22A-201ENST00000309934 FAM45BPQ6NSW5 357 aa6.05□□□□□ -1.44
SEC22A-201ENST00000309934 CERS6Q6ZMG9 384 aa6.05□□□□□ -1.44
SEC22A-201ENST00000309934 MAB21L3Q8N8X9 362 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms