RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 AGAP3Q96P47 875 aa18.09■□□□□ 0.49
SSSCA1-201ENST00000309328 TUBB2BQ9BVA1 445 aa18.09■□□□□ 0.49
SSSCA1-201ENST00000309328 USP29Q9HBJ7 922 aa18.09■□□□□ 0.49
SSSCA1-201ENST00000309328 GLOD4Q9HC38 313 aa18.09■□□□□ 0.49
SSSCA1-201ENST00000309328 GOLGA6AQ9NYA3 693 aa18.09■□□□□ 0.49
SSSCA1-201ENST00000309328 SARDHQ9UL12 918 aa18.09■□□□□ 0.49
SSSCA1-201ENST00000309328 R3HDM2Q9Y2K5 976 aaKnown RBP18.09■□□□□ 0.49
SSSCA1-201ENST00000309328 IGHV1OR15-9A0A0B4J2B8 117 aa18.08■□□□□ 0.48
SSSCA1-201ENST00000309328 A0A1W2PP55 124 aa18.08■□□□□ 0.48
SSSCA1-201ENST00000309328 AP1G1O43747 822 aa18.08■□□□□ 0.48
SSSCA1-201ENST00000309328 NDUFS2O75306 463 aa18.08■□□□□ 0.48
SSSCA1-201ENST00000309328 GCATO75600 419 aa18.08■□□□□ 0.48
SSSCA1-201ENST00000309328 ANXA9O76027 345 aa18.08■□□□□ 0.48
SSSCA1-201ENST00000309328 XPAP23025 273 aaPredicted RBP18.08■□□□□ 0.48
SSSCA1-201ENST00000309328 DRD3P35462 400 aa18.08■□□□□ 0.48
SSSCA1-201ENST00000309328 NUDT1P36639 197 aa18.08■□□□□ 0.48
SSSCA1-201ENST00000309328 DPP6P42658 865 aa18.08■□□□□ 0.48
SSSCA1-201ENST00000309328 RGRP47804 291 aa18.08■□□□□ 0.48
SSSCA1-201ENST00000309328 FNTAP49354 379 aa18.08■□□□□ 0.48
SSSCA1-201ENST00000309328 MAXP61244 160 aa18.08■□□□□ 0.48
SSSCA1-201ENST00000309328 ELP6Q0PNE2 266 aa18.08■□□□□ 0.48
SSSCA1-201ENST00000309328 PRPSAP1Q14558 356 aa18.08■□□□□ 0.48
SSSCA1-201ENST00000309328 ELF2Q15723 593 aa18.08■□□□□ 0.48
SSSCA1-201ENST00000309328 CYP1B1Q16678 543 aa18.08■□□□□ 0.48
SSSCA1-201ENST00000309328 NEK5Q6P3R8 708 aa18.08■□□□□ 0.48
SSSCA1-201ENST00000309328 ZNF567Q8N184 647 aa18.08■□□□□ 0.48
SSSCA1-201ENST00000309328 AADATQ8N5Z0 425 aa18.08■□□□□ 0.48
SSSCA1-201ENST00000309328 ARRDC2Q8TBH0 407 aa18.08■□□□□ 0.48
SSSCA1-201ENST00000309328 GRK7Q8WTQ7 553 aa18.08■□□□□ 0.48
SSSCA1-201ENST00000309328 FOXJ1Q92949 421 aa18.08■□□□□ 0.48
SSSCA1-201ENST00000309328 KLHL32Q96NJ5 620 aa18.08■□□□□ 0.48
SSSCA1-201ENST00000309328 FCRL5Q96RD9 977 aa18.08■□□□□ 0.48
SSSCA1-201ENST00000309328 SLC6A17Q9H1V8 727 aa18.08■□□□□ 0.48
SSSCA1-201ENST00000309328 GBA3Q9H227 469 aa18.08■□□□□ 0.48
SSSCA1-201ENST00000309328 PREBQ9HCU5 417 aa18.08■□□□□ 0.48
SSSCA1-201ENST00000309328 WSB2Q9NYS7 404 aaPredicted RBP18.08■□□□□ 0.48
SSSCA1-201ENST00000309328 CYP8B1Q9UNU6 501 aa18.08■□□□□ 0.48
SSSCA1-201ENST00000309328 AAR2Q9Y312 384 aaKnown RBP18.08■□□□□ 0.48
SSSCA1-201ENST00000309328 ATG2BQ96BY7 2078 aa18.08■□□□□ 0.48
SSSCA1-201ENST00000309328 C16orf96A6NNT2 1141 aa18.07■□□□□ 0.48
SSSCA1-201ENST00000309328 TRAFD1O14545 582 aaPredicted RBP18.07■□□□□ 0.48
SSSCA1-201ENST00000309328 MAP3K13O43283 966 aa18.07■□□□□ 0.48
SSSCA1-201ENST00000309328 PLRG1O43660 514 aaKnown RBP18.07■□□□□ 0.48
SSSCA1-201ENST00000309328 RHOBTB1O94844 696 aa18.07■□□□□ 0.48
SSSCA1-201ENST00000309328 ADRB3P13945 408 aa18.07■□□□□ 0.48
SSSCA1-201ENST00000309328 DMWDQ09019 674 aa18.07■□□□□ 0.48
SSSCA1-201ENST00000309328 CNTN1Q12860 1018 aa18.07■□□□□ 0.48
SSSCA1-201ENST00000309328 TCF15Q12870 199 aa18.07■□□□□ 0.48
SSSCA1-201ENST00000309328 ANKRD20A2Q5SQ80 823 aa18.07■□□□□ 0.48
SSSCA1-201ENST00000309328 ARMC12Q5T9G4 340 aa18.07■□□□□ 0.48
SSSCA1-201ENST00000309328 ANKRD20A1Q5TYW2 823 aa18.07■□□□□ 0.48
SSSCA1-201ENST00000309328 AGBL4Q5VU57 503 aa18.07■□□□□ 0.48
SSSCA1-201ENST00000309328 ANKRD20A3Q5VUR7 823 aa18.07■□□□□ 0.48
SSSCA1-201ENST00000309328 ERAP2Q6P179 960 aa18.07■□□□□ 0.48
SSSCA1-201ENST00000309328 ARHGEF18Q6ZSZ5 1173 aa18.07■□□□□ 0.48
SSSCA1-201ENST00000309328 CEP68Q76N32 757 aa18.07■□□□□ 0.48
SSSCA1-201ENST00000309328 CACUL1Q86Y37 369 aa18.07■□□□□ 0.48
SSSCA1-201ENST00000309328 CAMK1DQ8IU85 385 aa18.07■□□□□ 0.48
SSSCA1-201ENST00000309328 CREG2Q8IUH2 290 aa18.07■□□□□ 0.48
SSSCA1-201ENST00000309328 CCDC89Q8N998 374 aa18.07■□□□□ 0.48
SSSCA1-201ENST00000309328 FAM71DQ8N9W8 422 aa18.07■□□□□ 0.48
SSSCA1-201ENST00000309328 PRSS33Q8NF86 280 aa18.07■□□□□ 0.48
SSSCA1-201ENST00000309328 OR2T34Q8NGX1 318 aa18.07■□□□□ 0.48
SSSCA1-201ENST00000309328 C1orf54Q8WWF1 131 aa18.07■□□□□ 0.48
SSSCA1-201ENST00000309328 ATG4AQ8WYN0 398 aa18.07■□□□□ 0.48
SSSCA1-201ENST00000309328 ERLEC1Q96DZ1 483 aa18.07■□□□□ 0.48
SSSCA1-201ENST00000309328 TOE1Q96GM8 510 aaKnown RBP18.07■□□□□ 0.48
SSSCA1-201ENST00000309328 MS4A14Q96JA4 679 aa18.07■□□□□ 0.48
SSSCA1-201ENST00000309328 SRPK1Q96SB4 655 aaKnown RBP18.07■□□□□ 0.48
SSSCA1-201ENST00000309328 TMEM121Q9BTD3 319 aa18.07■□□□□ 0.48
SSSCA1-201ENST00000309328 ADGRE3Q9BY15 652 aa18.07■□□□□ 0.48
SSSCA1-201ENST00000309328 FAM153AQ9UHL3 310 aa18.07■□□□□ 0.48
SSSCA1-201ENST00000309328 RSPH14Q9UHP6 348 aa18.07■□□□□ 0.48
SSSCA1-201ENST00000309328 RAI2Q9Y5P3 530 aa18.07■□□□□ 0.48
SSSCA1-201ENST00000309328 UPK3BL1B0FP48 263 aa18.06■□□□□ 0.48
SSSCA1-201ENST00000309328 UPK3BL2E5RIL1 263 aa18.06■□□□□ 0.48
SSSCA1-201ENST00000309328 H0Y858 1186 aa18.06■□□□□ 0.48
SSSCA1-201ENST00000309328 CCDC188H7C350 402 aa18.06■□□□□ 0.48
SSSCA1-201ENST00000309328 TSPAN6O43657 245 aa18.06■□□□□ 0.48
SSSCA1-201ENST00000309328 SEMA4FO95754 770 aa18.06■□□□□ 0.48
SSSCA1-201ENST00000309328 EPOP01588 193 aa18.06■□□□□ 0.48
SSSCA1-201ENST00000309328 ADPRHP54922 357 aa18.06■□□□□ 0.48
SSSCA1-201ENST00000309328 DSC2Q02487 901 aa18.06■□□□□ 0.48
SSSCA1-201ENST00000309328 MPP3Q13368 585 aa18.06■□□□□ 0.48
SSSCA1-201ENST00000309328 PIP5KL1Q5T9C9 394 aa18.06■□□□□ 0.48
SSSCA1-201ENST00000309328 CCDC70Q6NSX1 233 aa18.06■□□□□ 0.48
SSSCA1-201ENST00000309328 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.06■□□□□ 0.48
SSSCA1-201ENST00000309328 PARS2Q7L3T8 475 aaKnown RBP18.06■□□□□ 0.48
SSSCA1-201ENST00000309328 LPCAT2Q7L5N7 544 aa18.06■□□□□ 0.48
SSSCA1-201ENST00000309328 PRELID2Q8N945 189 aa18.06■□□□□ 0.48
SSSCA1-201ENST00000309328 ATL2Q8NHH9 583 aa18.06■□□□□ 0.48
SSSCA1-201ENST00000309328 LRRN4Q8WUT4 740 aa18.06■□□□□ 0.48
SSSCA1-201ENST00000309328 MAGOHBQ96A72 148 aaKnown RBP18.06■□□□□ 0.48
SSSCA1-201ENST00000309328 TADA1Q96BN2 335 aa18.06■□□□□ 0.48
SSSCA1-201ENST00000309328 ZC3H10Q96K80 434 aaKnown RBP18.06■□□□□ 0.48
SSSCA1-201ENST00000309328 FAM118BQ9BPY3 351 aa18.06■□□□□ 0.48
SSSCA1-201ENST00000309328 DUSP15Q9H1R2 295 aaPredicted RBP18.06■□□□□ 0.48
SSSCA1-201ENST00000309328 NEUROG2Q9H2A3 272 aa18.06■□□□□ 0.48
SSSCA1-201ENST00000309328 RAB23Q9ULC3 237 aa18.06■□□□□ 0.48
SSSCA1-201ENST00000309328 PHTF1Q9UMS5 762 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms