RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 CCDC166P0CW27 439 aa10.78□□□□□ -0.68
SYNPO2-201ENST00000307142 PRLRP16471 622 aa10.78□□□□□ -0.68
SYNPO2-201ENST00000307142 BGNP21810 368 aa10.78□□□□□ -0.68
SYNPO2-201ENST00000307142 TRIM32Q13049 653 aa10.78□□□□□ -0.68
SYNPO2-201ENST00000307142 TEAD2Q15562 447 aa10.78□□□□□ -0.68
SYNPO2-201ENST00000307142 PTPRNQ16849 979 aa10.78□□□□□ -0.68
SYNPO2-201ENST00000307142 ALG11Q2TAA5 492 aa10.78□□□□□ -0.68
SYNPO2-201ENST00000307142 ZDHHC20Q5W0Z9 365 aa10.78□□□□□ -0.68
SYNPO2-201ENST00000307142 DTX3LQ8TDB6 740 aa10.78□□□□□ -0.68
SYNPO2-201ENST00000307142 CYB5D2Q8WUJ1 264 aa10.78□□□□□ -0.68
SYNPO2-201ENST00000307142 SELENOMQ8WWX9 145 aa10.78□□□□□ -0.68
SYNPO2-201ENST00000307142 ERP27Q96DN0 273 aa10.78□□□□□ -0.68
SYNPO2-201ENST00000307142 ACAT2Q9BWD1 397 aa10.78□□□□□ -0.68
SYNPO2-201ENST00000307142 RHOBTB2Q9BYZ6 727 aa10.78□□□□□ -0.68
SYNPO2-201ENST00000307142 L1RE1Q9UN81 338 aa10.78□□□□□ -0.68
SYNPO2-201ENST00000307142 OR10H1Q9Y4A9 318 aa10.78□□□□□ -0.68
SYNPO2-201ENST00000307142 CCDC154A6NI56 674 aa10.78□□□□□ -0.68
SYNPO2-201ENST00000307142 FPGTO14772 594 aa10.78□□□□□ -0.68
SYNPO2-201ENST00000307142 PHGDHO43175 533 aaKnown RBP10.78□□□□□ -0.68
SYNPO2-201ENST00000307142 UQCRBP14927 111 aa10.78□□□□□ -0.68
SYNPO2-201ENST00000307142 PLOD1Q02809 727 aaPredicted RBP10.78□□□□□ -0.68
SYNPO2-201ENST00000307142 TRIP4Q15650 581 aaPredicted RBP10.78□□□□□ -0.68
SYNPO2-201ENST00000307142 COMMD2Q86X83 199 aa10.78□□□□□ -0.68
SYNPO2-201ENST00000307142 GATAD2AQ86YP4 633 aa10.78□□□□□ -0.68
SYNPO2-201ENST00000307142 TEX9Q8N6V9 391 aa10.78□□□□□ -0.68
SYNPO2-201ENST00000307142 FBXO25Q8TCJ0 367 aa10.78□□□□□ -0.68
SYNPO2-201ENST00000307142 HEXDCQ8WVB3 486 aa10.78□□□□□ -0.68
SYNPO2-201ENST00000307142 KXD1Q9BQD3 176 aa10.78□□□□□ -0.68
SYNPO2-201ENST00000307142 TBC1D30Q9Y2I9 924 aa10.78□□□□□ -0.68
SYNPO2-201ENST00000307142 C5P01031 1676 aa10.78□□□□□ -0.68
SYNPO2-201ENST00000307142 CHURC1-FNTBB4DL54 471 aa10.78□□□□□ -0.68
SYNPO2-201ENST00000307142 POP4O95707 220 aaKnown RBP10.78□□□□□ -0.68
SYNPO2-201ENST00000307142 FGF1P05230 155 aa10.78□□□□□ -0.68
SYNPO2-201ENST00000307142 CNPP09543 421 aaKnown RBP10.78□□□□□ -0.68
SYNPO2-201ENST00000307142 COX7A2P14406 83 aa10.78□□□□□ -0.68
SYNPO2-201ENST00000307142 FOXM1Q08050 763 aa10.78□□□□□ -0.68
SYNPO2-201ENST00000307142 FNBP1LQ5T0N5 605 aa10.78□□□□□ -0.68
SYNPO2-201ENST00000307142 XYLT1Q86Y38 959 aa10.78□□□□□ -0.68
SYNPO2-201ENST00000307142 CATSPER2Q96P56 530 aa10.78□□□□□ -0.68
SYNPO2-201ENST00000307142 CPXM1Q96SM3 734 aa10.78□□□□□ -0.68
SYNPO2-201ENST00000307142 COPS8Q99627 209 aa10.78□□□□□ -0.68
SYNPO2-201ENST00000307142 TTLL2Q9BWV7 592 aa10.78□□□□□ -0.68
SYNPO2-201ENST00000307142 IL1RAPL1Q9NZN1 696 aa10.78□□□□□ -0.68
SYNPO2-201ENST00000307142 SLC24A2Q9UI40 661 aa10.78□□□□□ -0.68
SYNPO2-201ENST00000307142 TNPO3Q9Y5L0 923 aaKnown RBP10.78□□□□□ -0.68
SYNPO2-201ENST00000307142 TCHHQ07283 1943 aa10.78□□□□□ -0.68
SYNPO2-201ENST00000307142 PSMA4P25789 261 aaKnown RBP10.78□□□□□ -0.68
SYNPO2-201ENST00000307142 RPL21P46778 160 aaKnown RBP10.78□□□□□ -0.68
SYNPO2-201ENST00000307142 RHBDF2Q6PJF5 856 aa10.78□□□□□ -0.68
SYNPO2-201ENST00000307142 CFAP206Q8IYR0 622 aa10.78□□□□□ -0.68
SYNPO2-201ENST00000307142 GALNT4Q8N4A0 578 aa10.78□□□□□ -0.68
SYNPO2-201ENST00000307142 HDAC10Q969S8 669 aa10.78□□□□□ -0.68
SYNPO2-201ENST00000307142 FAM120BQ96EK7 910 aaKnown RBP10.78□□□□□ -0.68
SYNPO2-201ENST00000307142 PHTF1Q9UMS5 762 aa10.78□□□□□ -0.68
SYNPO2-201ENST00000307142 POLR1DQ9Y2S0 133 aa10.78□□□□□ -0.68
SYNPO2-201ENST00000307142 MYH9P35579 1960 aaKnown RBP10.78□□□□□ -0.68
SYNPO2-201ENST00000307142 LRRC37A3O60309 1634 aa10.78□□□□□ -0.68
SYNPO2-201ENST00000307142 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.77□□□□□ -0.68
SYNPO2-201ENST00000307142 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.77□□□□□ -0.68
SYNPO2-201ENST00000307142 USP1O94782 785 aa10.77□□□□□ -0.68
SYNPO2-201ENST00000307142 PECAM1P16284 738 aaPredicted RBP10.77□□□□□ -0.68
SYNPO2-201ENST00000307142 AMZ1Q400G9 498 aa10.77□□□□□ -0.68
SYNPO2-201ENST00000307142 AGKQ53H12 422 aa10.77□□□□□ -0.68
SYNPO2-201ENST00000307142 CAPRIN2Q6IMN6 1127 aaKnown RBP10.77□□□□□ -0.68
SYNPO2-201ENST00000307142 PMF1Q6P1K2 205 aa10.77□□□□□ -0.68
SYNPO2-201ENST00000307142 NKAPQ8N5F7 415 aaKnown RBP10.77□□□□□ -0.68
SYNPO2-201ENST00000307142 HMCESQ96FZ2 354 aa10.77□□□□□ -0.68
SYNPO2-201ENST00000307142 KLHL32Q96NJ5 620 aa10.77□□□□□ -0.68
SYNPO2-201ENST00000307142 HEPHQ9BQS7 1158 aa10.77□□□□□ -0.68
SYNPO2-201ENST00000307142 CHST7Q9NS84 486 aa10.77□□□□□ -0.68
SYNPO2-201ENST00000307142 IL36AQ9UHA7 158 aa10.77□□□□□ -0.68
SYNPO2-201ENST00000307142 SNX10Q9Y5X0 201 aa10.77□□□□□ -0.68
SYNPO2-201ENST00000307142 TPP1O14773 563 aa10.77□□□□□ -0.68
SYNPO2-201ENST00000307142 IYDQ6PHW0 289 aa10.77□□□□□ -0.68
SYNPO2-201ENST00000307142 ZNF621Q6ZSS3 439 aa10.77□□□□□ -0.68
SYNPO2-201ENST00000307142 PAGE2Q7Z2X7 111 aa10.77□□□□□ -0.68
SYNPO2-201ENST00000307142 LUZP2Q86TE4 346 aa10.77□□□□□ -0.68
SYNPO2-201ENST00000307142 SCAMP5Q8TAC9 235 aa10.77□□□□□ -0.68
SYNPO2-201ENST00000307142 FAIM2Q9BWQ8 316 aa10.77□□□□□ -0.68
SYNPO2-201ENST00000307142 TRIM4Q9C037 500 aa10.77□□□□□ -0.68
SYNPO2-201ENST00000307142 KDM3BQ7LBC6 1761 aa10.77□□□□□ -0.68
SYNPO2-201ENST00000307142 GLYATL1P3A0A0U1RQE8 302 aa10.77□□□□□ -0.69
SYNPO2-201ENST00000307142 TM9SF1O15321 606 aa10.77□□□□□ -0.69
SYNPO2-201ENST00000307142 TM7SF2O76062 418 aa10.77□□□□□ -0.69
SYNPO2-201ENST00000307142 OR6A2O95222 327 aa10.77□□□□□ -0.69
SYNPO2-201ENST00000307142 EPORP19235 508 aa10.77□□□□□ -0.69
SYNPO2-201ENST00000307142 ADRA1DP25100 572 aa10.77□□□□□ -0.69
SYNPO2-201ENST00000307142 POU1F1P28069 291 aa10.77□□□□□ -0.69
SYNPO2-201ENST00000307142 CRYMQ14894 314 aa10.77□□□□□ -0.69
SYNPO2-201ENST00000307142 MIIPQ5JXC2 388 aa10.77□□□□□ -0.69
SYNPO2-201ENST00000307142 IRGCQ6NXR0 463 aa10.77□□□□□ -0.69
SYNPO2-201ENST00000307142 C4orf32Q8N8J7 132 aa10.77□□□□□ -0.69
SYNPO2-201ENST00000307142 LNX1Q8TBB1 728 aaPredicted RBP10.77□□□□□ -0.69
SYNPO2-201ENST00000307142 STAG3L4Q8TBR4 150 aa10.77□□□□□ -0.69
SYNPO2-201ENST00000307142 PRRG4Q9BZD6 226 aa10.77□□□□□ -0.69
SYNPO2-201ENST00000307142 A0A0U1RQF3 1178 aa10.77□□□□□ -0.69
SYNPO2-201ENST00000307142 KCNU1A8MYU2 1149 aa10.77□□□□□ -0.69
SYNPO2-201ENST00000307142 WDR47O94967 919 aa10.77□□□□□ -0.69
SYNPO2-201ENST00000307142 IDSP22304 550 aa10.77□□□□□ -0.69
SYNPO2-201ENST00000307142 GNA12Q03113 381 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms