RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 SERPINB6P35237 376 aa26.74■■□□□ 1.87
CDKN2A-201ENST00000304494 CLDN2P57739 230 aa26.74■■□□□ 1.87
CDKN2A-201ENST00000304494 KRT81Q14533 505 aa26.74■■□□□ 1.87
CDKN2A-201ENST00000304494 ASTE1Q2TB18 679 aaPredicted RBP26.74■■□□□ 1.87
CDKN2A-201ENST00000304494 CFAP58Q5T655 872 aa26.74■■□□□ 1.87
CDKN2A-201ENST00000304494 TXNRD3NBQ6F5E7 133 aa26.74■■□□□ 1.87
CDKN2A-201ENST00000304494 KYAT3Q6YP21 454 aaKnown RBP26.74■■□□□ 1.87
CDKN2A-201ENST00000304494 SLCO6A1Q86UG4 719 aa26.74■■□□□ 1.87
CDKN2A-201ENST00000304494 PNPLA1Q8N8W4 532 aa26.74■■□□□ 1.87
CDKN2A-201ENST00000304494 ZNF599Q96NL3 588 aa26.74■■□□□ 1.87
CDKN2A-201ENST00000304494 SUV39H2Q9H5I1 410 aa26.74■■□□□ 1.87
CDKN2A-201ENST00000304494 PCDH18Q9HCL0 1135 aa26.74■■□□□ 1.87
CDKN2A-201ENST00000304494 KLHL11Q9NVR0 708 aa26.74■■□□□ 1.87
CDKN2A-201ENST00000304494 RCOR3Q9P2K3 495 aaPredicted RBP26.74■■□□□ 1.87
CDKN2A-201ENST00000304494 GGT7Q9UJ14 662 aa26.74■■□□□ 1.87
CDKN2A-201ENST00000304494 MSRB2Q9Y3D2 182 aa26.74■■□□□ 1.87
CDKN2A-201ENST00000304494 FPGTO14772 594 aa26.73■■□□□ 1.87
CDKN2A-201ENST00000304494 SPINT1O43278 529 aa26.73■■□□□ 1.87
CDKN2A-201ENST00000304494 PIGNO95427 931 aa26.73■■□□□ 1.87
CDKN2A-201ENST00000304494 ATXN1LP0C7T5 689 aaKnown RBP26.73■■□□□ 1.87
CDKN2A-201ENST00000304494 AMPD1P23109 780 aa26.73■■□□□ 1.87
CDKN2A-201ENST00000304494 NSUN2Q08J23 767 aaKnown RBP eCLIP26.73■■□□□ 1.87
CDKN2A-201ENST00000304494 ELP6Q0PNE2 266 aa26.73■■□□□ 1.87
CDKN2A-201ENST00000304494 ARHGAP36Q6ZRI8 547 aa26.73■■□□□ 1.87
CDKN2A-201ENST00000304494 Q6ZSR6 202 aa26.73■■□□□ 1.87
CDKN2A-201ENST00000304494 TSEN2Q8NCE0 465 aaKnown RBP26.73■■□□□ 1.87
CDKN2A-201ENST00000304494 DENND6BQ8NEG7 585 aa26.73■■□□□ 1.87
CDKN2A-201ENST00000304494 CXorf40AQ8TE69 158 aa26.73■■□□□ 1.87
CDKN2A-201ENST00000304494 ATP13A3Q9H7F0 1226 aa26.73■■□□□ 1.87
CDKN2A-201ENST00000304494 TOR4AQ9NXH8 423 aa26.73■■□□□ 1.87
CDKN2A-201ENST00000304494 KLK13Q9UKR3 277 aa26.73■■□□□ 1.87
CDKN2A-201ENST00000304494 KNL1Q8NG31 2342 aa26.72■■□□□ 1.87
CDKN2A-201ENST00000304494 TSPAN11A1L157 253 aa26.72■■□□□ 1.87
CDKN2A-201ENST00000304494 FAM221BA6H8Z2 402 aa26.72■■□□□ 1.87
CDKN2A-201ENST00000304494 PROSCO94903 275 aa26.72■■□□□ 1.87
CDKN2A-201ENST00000304494 TMEM253P0C7T8 217 aa26.72■■□□□ 1.87
CDKN2A-201ENST00000304494 TIMP2P16035 220 aa26.72■■□□□ 1.87
CDKN2A-201ENST00000304494 SERPINA4P29622 427 aa26.72■■□□□ 1.87
CDKN2A-201ENST00000304494 RENBPP51606 427 aa26.72■■□□□ 1.87
CDKN2A-201ENST00000304494 CDH6P55285 790 aa26.72■■□□□ 1.87
CDKN2A-201ENST00000304494 BNIP3Q12983 259 aa26.72■■□□□ 1.87
CDKN2A-201ENST00000304494 TMCO4Q5TGY1 634 aa26.72■■□□□ 1.87
CDKN2A-201ENST00000304494 BRAT1Q6PJG6 821 aa26.72■■□□□ 1.87
CDKN2A-201ENST00000304494 PTAR1Q7Z6K3 402 aaPredicted RBP26.72■■□□□ 1.87
CDKN2A-201ENST00000304494 SRLQ86TD4 932 aa26.72■■□□□ 1.87
CDKN2A-201ENST00000304494 CNGA4Q8IV77 575 aa26.72■■□□□ 1.87
CDKN2A-201ENST00000304494 TSC1Q92574 1164 aa26.72■■□□□ 1.87
CDKN2A-201ENST00000304494 IFT43Q96FT9 208 aa26.72■■□□□ 1.87
CDKN2A-201ENST00000304494 BMFQ96LC9 184 aa26.72■■□□□ 1.87
CDKN2A-201ENST00000304494 CCDC42Q96M95 316 aa26.72■■□□□ 1.87
CDKN2A-201ENST00000304494 C1QTNF7Q9BXJ2 289 aa26.72■■□□□ 1.87
CDKN2A-201ENST00000304494 SEPT3Q9UH03 358 aa26.72■■□□□ 1.87
CDKN2A-201ENST00000304494 GOLGA8CPA6NN73 597 aa26.71■■□□□ 1.87
CDKN2A-201ENST00000304494 RAD51BO15315 384 aa26.71■■□□□ 1.87
CDKN2A-201ENST00000304494 LDOC1O95751 146 aaPredicted RBP26.71■■□□□ 1.87
CDKN2A-201ENST00000304494 RABIFP47224 123 aa26.71■■□□□ 1.87
CDKN2A-201ENST00000304494 ADKP55263 362 aaKnown RBP26.71■■□□□ 1.87
CDKN2A-201ENST00000304494 LBRQ14739 615 aaKnown RBP26.71■■□□□ 1.87
CDKN2A-201ENST00000304494 LRRC73Q5JTD7 316 aa26.71■■□□□ 1.87
CDKN2A-201ENST00000304494 UNQ6494/PRO21346Q6UXR6 183 aa26.71■■□□□ 1.87
CDKN2A-201ENST00000304494 EID2Q8N6I1 236 aa26.71■■□□□ 1.87
CDKN2A-201ENST00000304494 PSKH2Q96QS6 385 aa26.71■■□□□ 1.87
CDKN2A-201ENST00000304494 KLF6Q99612 283 aaPredicted RBP26.71■■□□□ 1.87
CDKN2A-201ENST00000304494 PACSIN1Q9BY11 444 aa26.71■■□□□ 1.87
CDKN2A-201ENST00000304494 ETNK2Q9NVF9 386 aa26.71■■□□□ 1.87
CDKN2A-201ENST00000304494 COL5A1P20908 1838 aaPredicted RBP26.71■■□□□ 1.87
CDKN2A-201ENST00000304494 SPEGQ15772 3267 aa26.7■■□□□ 1.87
CDKN2A-201ENST00000304494 POM121BA6NF01 834 aa26.7■■□□□ 1.86
CDKN2A-201ENST00000304494 TM7SF2O76062 418 aa26.7■■□□□ 1.86
CDKN2A-201ENST00000304494 DKK1O94907 266 aa26.7■■□□□ 1.86
CDKN2A-201ENST00000304494 RGRP47804 291 aa26.7■■□□□ 1.86
CDKN2A-201ENST00000304494 UGP2Q16851 508 aa26.7■■□□□ 1.86
CDKN2A-201ENST00000304494 ERAP2Q6P179 960 aa26.7■■□□□ 1.86
CDKN2A-201ENST00000304494 KANSL1Q7Z3B3 1105 aa26.7■■□□□ 1.86
CDKN2A-201ENST00000304494 TP53INP2Q8IXH6 220 aa26.7■■□□□ 1.86
CDKN2A-201ENST00000304494 SLC22A18ASQ8N1D0 253 aa26.7■■□□□ 1.86
CDKN2A-201ENST00000304494 FAM71BQ8TC56 605 aa26.7■■□□□ 1.86
CDKN2A-201ENST00000304494 CNDP2Q96KP4 475 aaKnown RBP26.7■■□□□ 1.86
CDKN2A-201ENST00000304494 NHEJ1Q9H9Q4 299 aaPredicted RBP26.7■■□□□ 1.86
CDKN2A-201ENST00000304494 GPR27Q9NS67 375 aa26.7■■□□□ 1.86
CDKN2A-201ENST00000304494 DOCK9Q9BZ29 2069 aa26.7■■□□□ 1.86
CDKN2A-201ENST00000304494 ACACBO00763 2458 aa26.7■■□□□ 1.86
CDKN2A-201ENST00000304494 CABIN1Q9Y6J0 2220 aa26.69■■□□□ 1.86
CDKN2A-201ENST00000304494 BUB1BO60566 1050 aaPredicted RBP26.69■■□□□ 1.86
CDKN2A-201ENST00000304494 MMP20O60882 483 aa26.69■■□□□ 1.86
CDKN2A-201ENST00000304494 AP1S1P61966 158 aa26.69■■□□□ 1.86
CDKN2A-201ENST00000304494 BCL2L1Q07817 233 aa26.69■■□□□ 1.86
CDKN2A-201ENST00000304494 ZNF235Q14590 738 aa26.69■■□□□ 1.86
CDKN2A-201ENST00000304494 TMEM52BQ4KMG9 183 aa26.69■■□□□ 1.86
CDKN2A-201ENST00000304494 SARM1Q6SZW1 724 aa26.69■■□□□ 1.86
CDKN2A-201ENST00000304494 CAMK1DQ8IU85 385 aa26.69■■□□□ 1.86
CDKN2A-201ENST00000304494 BBS5Q8N3I7 341 aa26.69■■□□□ 1.86
CDKN2A-201ENST00000304494 ATPAF2Q8N5M1 289 aa26.69■■□□□ 1.86
CDKN2A-201ENST00000304494 NSMCE1Q8WV22 266 aa26.69■■□□□ 1.86
CDKN2A-201ENST00000304494 CHP1Q99653 195 aa26.69■■□□□ 1.86
CDKN2A-201ENST00000304494 TRPM6Q9BX84 2022 aa26.69■■□□□ 1.86
CDKN2A-201ENST00000304494 C1QTNF9BB2RNN3 333 aa26.68■■□□□ 1.86
CDKN2A-201ENST00000304494 AKR1B15C9JRZ8 316 aaPredicted RBP26.68■■□□□ 1.86
CDKN2A-201ENST00000304494 ENC1O14682 589 aa26.68■■□□□ 1.86
CDKN2A-201ENST00000304494 MAFKO60675 156 aa26.68■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms