RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 MAPKAPK3Q16644 382 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 HIST3H2AQ7L7L0 130 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 POC5Q8NA72 575 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 HIST1H2ACQ93077 130 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 ABCB10Q9NRK6 738 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 ARL15Q9NXU5 204 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 POLR1DQ9Y2S0 133 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 SLC12A8A0AV02 714 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 KRT36O76013 467 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 CHRNGP07510 517 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 SERPINA4P29622 427 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 SMCO1Q147U7 214 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 TAF5Q15542 800 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 ZNHIT3Q15649 155 aaPredicted RBP7.7□□□□□ -1.18
SF3B3-201ENST00000302516 ZDHHC20Q5W0Z9 365 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 FAM83AQ86UY5 434 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 MIB1Q86YT6 1006 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 RNASE11Q8TAA1 199 aaKnown RBP7.7□□□□□ -1.18
SF3B3-201ENST00000302516 TRIT1Q9H3H1 467 aaKnown RBP7.7□□□□□ -1.18
SF3B3-201ENST00000302516 S100A14Q9HCY8 104 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 GAKO14976 1311 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 LOC110117498-PIK3R3F6TDL0 507 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 TMCC2O75069 709 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 ANXA5P08758 320 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 TLX1P31314 330 aaPredicted RBP7.7□□□□□ -1.18
SF3B3-201ENST00000302516 RTP1P59025 263 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 NKX1-1Q15270 411 aaPredicted RBP7.7□□□□□ -1.18
SF3B3-201ENST00000302516 OVOS1Q6IE37 1185 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 ARHGAP36Q6ZRI8 547 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 BBS12Q6ZW61 710 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 CHPFQ8IZ52 775 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 BPIFB6Q8NFQ5 453 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 OR2T34Q8NGX1 318 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 OR2T3Q8NH03 318 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 HM13Q8TCT9 377 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 EBNA1BP2Q99848 306 aaKnown RBP7.7□□□□□ -1.18
SF3B3-201ENST00000302516 RCOR3Q9P2K3 495 aaPredicted RBP7.7□□□□□ -1.18
SF3B3-201ENST00000302516 PFDN2Q9UHV9 154 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 ZNF222Q9UK12 451 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 SNX7Q9UNH6 387 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 ERN1O75460 977 aaKnown RBP7.7□□□□□ -1.18
SF3B3-201ENST00000302516 CCDC166P0CW27 439 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 IL1R1P14778 569 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 VBP1P61758 197 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 UBAP2LQ14157 1087 aaKnown RBP7.7□□□□□ -1.18
SF3B3-201ENST00000302516 SPIDRQ14159 915 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 ARMC12Q5T9G4 340 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 NANOGNBQ7Z5D8 188 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 ZNF614Q8N883 585 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 WNT8BQ93098 351 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 CPB2Q96IY4 423 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 MNTQ99583 582 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 APOL2Q9BQE5 337 aa7.7□□□□□ -1.18
SF3B3-201ENST00000302516 FAM237BA0A1B0GVD1 139 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 SUV39H1O43463 412 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 TM7SF2O76062 418 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 COL6A2P12110 1019 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 VN1R5Q7Z5H4 357 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 UXS1Q8NBZ7 420 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 PIK3R3Q92569 461 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 PPP1R14AQ96A00 147 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 REXO5Q96IC2 774 aaKnown RBP7.69□□□□□ -1.18
SF3B3-201ENST00000302516 RHOBTB2Q9BYZ6 727 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 ALG9Q9H6U8 611 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 ENTPD5O75356 428 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 SERPINA1P01009 418 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 CST1P01037 141 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 ADSLP30566 484 aaPredicted RBP7.69□□□□□ -1.18
SF3B3-201ENST00000302516 NOS2P35228 1153 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 HKDC1Q2TB90 917 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 ZFP69Q49AA0 526 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 MIIPQ5JXC2 388 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 STXBP5Q5T5C0 1151 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 TRABD2AQ86V40 505 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 PIH1D2Q8WWB5 315 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 CKLFQ9UBR5 152 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 LGALS13Q9UHV8 139 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 STK25O00506 426 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 ITGA2BP08514 1039 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 CRATP43155 626 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 FCGRTP55899 365 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 ARMC8Q8IUR7 673 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 PGBD3Q8N328 593 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 NAT14Q8WUY8 206 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 C18orf25Q96B23 403 aaPredicted RBP7.69□□□□□ -1.18
SF3B3-201ENST00000302516 ACE2Q9BYF1 805 aaPredicted RBP7.69□□□□□ -1.18
SF3B3-201ENST00000302516 GPATCH2LQ9NWQ4 482 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 ULK1O75385 1050 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 CKMP06732 381 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 ARP10275 920 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 IDH2P48735 452 aaKnown RBP7.69□□□□□ -1.18
SF3B3-201ENST00000302516 LRRC55Q6ZSA7 311 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 COMMD2Q86X83 199 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 RAB43Q86YS6 212 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 FCGR1BQ92637 280 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 SMAD5Q99717 465 aaKnown RBP7.69□□□□□ -1.18
SF3B3-201ENST00000302516 SMURF2Q9HAU4 748 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 CHKBQ9Y259 395 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 TTLL13PA6NNM8 815 aa7.69□□□□□ -1.18
SF3B3-201ENST00000302516 SLC22A3O75751 556 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms