RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 EXOSC4Q9NPD3 245 aaKnown RBP13.41□□□□□ -0.26
CASC4-201ENST00000299957 RRN3Q9NYV6 651 aa13.41□□□□□ -0.26
CASC4-201ENST00000299957 ZNF180Q9UJW8 692 aa13.41□□□□□ -0.26
CASC4-201ENST00000299957 TRAF6Q9Y4K3 522 aa13.41□□□□□ -0.26
CASC4-201ENST00000299957 IPPQ9Y573 584 aa13.41□□□□□ -0.26
CASC4-201ENST00000299957 DOT1LQ8TEK3 1739 aa13.41□□□□□ -0.26
CASC4-201ENST00000299957 MAGEB16A2A368 324 aa13.41□□□□□ -0.26
CASC4-201ENST00000299957 H3BSA7 217 aa13.41□□□□□ -0.26
CASC4-201ENST00000299957 PAGE1O75459 146 aa13.41□□□□□ -0.26
CASC4-201ENST00000299957 CABYRO75952 493 aa13.41□□□□□ -0.26
CASC4-201ENST00000299957 ARSAP15289 507 aa13.41□□□□□ -0.26
CASC4-201ENST00000299957 RGS2P41220 211 aa13.41□□□□□ -0.26
CASC4-201ENST00000299957 SERPINH1P50454 418 aaKnown RBP13.41□□□□□ -0.26
CASC4-201ENST00000299957 CHRNB3Q05901 458 aa13.41□□□□□ -0.26
CASC4-201ENST00000299957 ARHGEF7Q14155 803 aa13.41□□□□□ -0.26
CASC4-201ENST00000299957 PSMD5Q16401 504 aa13.41□□□□□ -0.26
CASC4-201ENST00000299957 ARHGAP36Q6ZRI8 547 aa13.41□□□□□ -0.26
CASC4-201ENST00000299957 TMCO5AQ8N6Q1 288 aa13.41□□□□□ -0.26
CASC4-201ENST00000299957 UBR7Q8N806 425 aa13.41□□□□□ -0.26
CASC4-201ENST00000299957 MAPK15Q8TD08 544 aa13.41□□□□□ -0.26
CASC4-201ENST00000299957 DDI1Q8WTU0 396 aa13.41□□□□□ -0.26
CASC4-201ENST00000299957 SMARCD1Q96GM5 515 aa13.41□□□□□ -0.26
CASC4-201ENST00000299957 DACH2Q96NX9 599 aa13.41□□□□□ -0.26
CASC4-201ENST00000299957 FCRL3Q96P31 734 aaPredicted RBP13.41□□□□□ -0.26
CASC4-201ENST00000299957 PKP2Q99959 881 aa13.41□□□□□ -0.26
CASC4-201ENST00000299957 KANSL3Q9P2N6 904 aa13.41□□□□□ -0.26
CASC4-201ENST00000299957 RBPJLQ9UBG7 517 aa13.41□□□□□ -0.26
CASC4-201ENST00000299957 TRHDEQ9UKU6 1024 aa13.41□□□□□ -0.26
CASC4-201ENST00000299957 SLCO1B7G3V0H7 640 aa13.41□□□□□ -0.26
CASC4-201ENST00000299957 TP73O15350 636 aa13.41□□□□□ -0.26
CASC4-201ENST00000299957 NCAM2O15394 837 aa13.41□□□□□ -0.26
CASC4-201ENST00000299957 TBX18O95935 607 aa13.41□□□□□ -0.26
CASC4-201ENST00000299957 GNAZP19086 355 aa13.41□□□□□ -0.26
CASC4-201ENST00000299957 CYP3A5P20815 502 aa13.41□□□□□ -0.26
CASC4-201ENST00000299957 AKT1P31749 480 aa13.41□□□□□ -0.26
CASC4-201ENST00000299957 GRM5P41594 1212 aa13.41□□□□□ -0.26
CASC4-201ENST00000299957 ARHGDIAP52565 204 aa13.41□□□□□ -0.26
CASC4-201ENST00000299957 DSC2Q02487 901 aa13.41□□□□□ -0.26
CASC4-201ENST00000299957 ITGADQ13349 1161 aa13.41□□□□□ -0.26
CASC4-201ENST00000299957 NADK2Q4G0N4 442 aa13.41□□□□□ -0.26
CASC4-201ENST00000299957 NAPRTQ6XQN6 538 aa13.41□□□□□ -0.26
CASC4-201ENST00000299957 ANKLE1Q8NAG6 615 aa13.41□□□□□ -0.26
CASC4-201ENST00000299957 NLGN2Q8NFZ4 835 aa13.41□□□□□ -0.26
CASC4-201ENST00000299957 ADAM2Q99965 735 aa13.41□□□□□ -0.26
CASC4-201ENST00000299957 SLC25A23Q9BV35 468 aa13.41□□□□□ -0.26
CASC4-201ENST00000299957 CINPQ9BW66 212 aaPredicted RBP13.41□□□□□ -0.26
CASC4-201ENST00000299957 SPATA16Q9BXB7 569 aa13.41□□□□□ -0.26
CASC4-201ENST00000299957 SORCS3Q9UPU3 1222 aa13.41□□□□□ -0.26
CASC4-201ENST00000299957 RAD54BQ9Y620 910 aa13.41□□□□□ -0.26
CASC4-201ENST00000299957 FAM159BA6NKW6 160 aa13.4□□□□□ -0.26
CASC4-201ENST00000299957 PSMD3O43242 534 aa13.4□□□□□ -0.26
CASC4-201ENST00000299957 ZBTB14O43829 449 aa13.4□□□□□ -0.26
CASC4-201ENST00000299957 CRTAMO95727 393 aa13.4□□□□□ -0.26
CASC4-201ENST00000299957 FGF3P11487 239 aaPredicted RBP13.4□□□□□ -0.26
CASC4-201ENST00000299957 LHX1P48742 406 aa13.4□□□□□ -0.26
CASC4-201ENST00000299957 TBX4P57082 545 aa13.4□□□□□ -0.26
CASC4-201ENST00000299957 VAC14Q08AM6 782 aa13.4□□□□□ -0.26
CASC4-201ENST00000299957 CCDC85BQ15834 202 aaPredicted RBP13.4□□□□□ -0.26
CASC4-201ENST00000299957 PPP1R3AQ16821 1122 aa13.4□□□□□ -0.26
CASC4-201ENST00000299957 SAMD4BQ5PRF9 694 aaKnown RBP13.4□□□□□ -0.26
CASC4-201ENST00000299957 ADCK1Q86TW2 530 aa13.4□□□□□ -0.26
CASC4-201ENST00000299957 DHRSXQ8N5I4 330 aa13.4□□□□□ -0.26
CASC4-201ENST00000299957 ATAD1Q8NBU5 361 aa13.4□□□□□ -0.26
CASC4-201ENST00000299957 NSMCE2Q96MF7 247 aa13.4□□□□□ -0.26
CASC4-201ENST00000299957 BRD8Q9H0E9 1235 aa13.4□□□□□ -0.26
CASC4-201ENST00000299957 ABHD16BQ9H3Z7 469 aa13.4□□□□□ -0.26
CASC4-201ENST00000299957 SOX17Q9H6I2 414 aaPredicted RBP13.4□□□□□ -0.26
CASC4-201ENST00000299957 KCNK13Q9HB14 408 aa13.4□□□□□ -0.26
CASC4-201ENST00000299957 SPAG4Q9NPE6 437 aa13.4□□□□□ -0.26
CASC4-201ENST00000299957 WWOXQ9NZC7 414 aa13.4□□□□□ -0.26
CASC4-201ENST00000299957 PCDHB12Q9Y5F1 795 aa13.4□□□□□ -0.26
CASC4-201ENST00000299957 AP2A1O95782 977 aa13.4□□□□□ -0.26
CASC4-201ENST00000299957 LTA4HP09960 611 aaKnown RBP13.4□□□□□ -0.26
CASC4-201ENST00000299957 SLC2A3P11169 496 aa13.4□□□□□ -0.26
CASC4-201ENST00000299957 TSHRP16473 764 aa13.4□□□□□ -0.26
CASC4-201ENST00000299957 CCR3P51677 355 aa13.4□□□□□ -0.26
CASC4-201ENST00000299957 ZNF157P51786 506 aaPredicted RBP13.4□□□□□ -0.26
CASC4-201ENST00000299957 IL5RAQ01344 420 aa13.4□□□□□ -0.26
CASC4-201ENST00000299957 POLD3Q15054 466 aaPredicted RBP13.4□□□□□ -0.26
CASC4-201ENST00000299957 TRIM16LQ309B1 348 aa13.4□□□□□ -0.26
CASC4-201ENST00000299957 PGS1Q32NB8 556 aa13.4□□□□□ -0.26
CASC4-201ENST00000299957 RBM20Q5T481 1227 aaKnown RBP13.4□□□□□ -0.26
CASC4-201ENST00000299957 MBLAC2Q68D91 279 aa13.4□□□□□ -0.26
CASC4-201ENST00000299957 GLMNQ92990 594 aa13.4□□□□□ -0.26
CASC4-201ENST00000299957 DGCR14Q96DF8 476 aaKnown RBP13.4□□□□□ -0.26
CASC4-201ENST00000299957 TINF2Q9BSI4 451 aa13.4□□□□□ -0.26
CASC4-201ENST00000299957 SSU72Q9NP77 194 aaKnown RBP13.4□□□□□ -0.26
CASC4-201ENST00000299957 ADARB2Q9NS39 739 aaKnown RBP13.4□□□□□ -0.26
CASC4-201ENST00000299957 ZSCAN9O15535 394 aaPredicted RBP13.4□□□□□ -0.26
CASC4-201ENST00000299957 AHSGP02765 367 aa13.4□□□□□ -0.26
CASC4-201ENST00000299957 CRABP2P29373 138 aa13.4□□□□□ -0.26
CASC4-201ENST00000299957 TKTP29401 623 aaKnown RBP13.4□□□□□ -0.26
CASC4-201ENST00000299957 RENBPP51606 427 aa13.4□□□□□ -0.26
CASC4-201ENST00000299957 ZNF132P52740 706 aa13.4□□□□□ -0.26
CASC4-201ENST00000299957 ECT2LQ008S8 904 aa13.4□□□□□ -0.26
CASC4-201ENST00000299957 DMC1Q14565 340 aa13.4□□□□□ -0.26
CASC4-201ENST00000299957 PTPRNQ16849 979 aa13.4□□□□□ -0.26
CASC4-201ENST00000299957 IL27RAQ6UWB1 636 aa13.4□□□□□ -0.26
CASC4-201ENST00000299957 PIM3Q86V86 326 aa13.4□□□□□ -0.26
CASC4-201ENST00000299957 HEATR4Q86WZ0 1026 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms