RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 PLEKHG6Q3KR16 790 aa23.07■■□□□ 1.28
PTX3-201ENST00000295927 RETSATQ6NUM9 610 aa23.07■■□□□ 1.28
PTX3-201ENST00000295927 DENND1AQ8TEH3 1009 aa23.07■■□□□ 1.28
PTX3-201ENST00000295927 IRF7Q92985 503 aa23.07■■□□□ 1.28
PTX3-201ENST00000295927 IARS2Q9NSE4 1012 aaKnown RBP23.07■■□□□ 1.28
PTX3-201ENST00000295927 TXNDC16Q9P2K2 825 aa23.07■■□□□ 1.28
PTX3-201ENST00000295927 INTS6Q9UL03 887 aaKnown RBP23.07■■□□□ 1.28
PTX3-201ENST00000295927 SRRM3A6NNA2 597 aaPredicted RBP23.06■■□□□ 1.28
PTX3-201ENST00000295927 GOLGA8TH3BQL2 631 aa23.06■■□□□ 1.28
PTX3-201ENST00000295927 RFPL1O75677 317 aa23.06■■□□□ 1.28
PTX3-201ENST00000295927 GP5P40197 560 aa23.06■■□□□ 1.28
PTX3-201ENST00000295927 RHOAP61586 193 aa23.06■■□□□ 1.28
PTX3-201ENST00000295927 SLC18A2Q05940 514 aa23.06■■□□□ 1.28
PTX3-201ENST00000295927 NSUN2Q08J23 767 aaKnown RBP eCLIP23.06■■□□□ 1.28
PTX3-201ENST00000295927 CNGA3Q16281 694 aa23.06■■□□□ 1.28
PTX3-201ENST00000295927 DYDC1Q8WWB3 177 aa23.06■■□□□ 1.28
PTX3-201ENST00000295927 SGSM3Q96HU1 749 aa23.06■■□□□ 1.28
PTX3-201ENST00000295927 CDCA3Q99618 268 aaPredicted RBP23.06■■□□□ 1.28
PTX3-201ENST00000295927 BBS2Q9BXC9 721 aa23.06■■□□□ 1.28
PTX3-201ENST00000295927 IGFLR1Q9H665 355 aa23.06■■□□□ 1.28
PTX3-201ENST00000295927 SPHK2Q9NRA0 654 aa23.06■■□□□ 1.28
PTX3-201ENST00000295927 ABCB8Q9NUT2 735 aa23.06■■□□□ 1.28
PTX3-201ENST00000295927 WNT6Q9Y6F9 365 aa23.06■■□□□ 1.28
PTX3-201ENST00000295927 NEDD8-MDP1E9PL57 170 aa23.06■■□□□ 1.28
PTX3-201ENST00000295927 K7ERQ8 282 aa23.06■■□□□ 1.28
PTX3-201ENST00000295927 VAPBO95292 243 aa23.06■■□□□ 1.28
PTX3-201ENST00000295927 NDST3O95803 873 aa23.06■■□□□ 1.28
PTX3-201ENST00000295927 PLK1P53350 603 aa23.06■■□□□ 1.28
PTX3-201ENST00000295927 GRTP1Q5TC63 336 aa23.06■■□□□ 1.28
PTX3-201ENST00000295927 ATP2A3Q93084 1043 aa23.06■■□□□ 1.28
PTX3-201ENST00000295927 CHKBQ9Y259 395 aa23.06■■□□□ 1.28
PTX3-201ENST00000295927 ARNTP27540 789 aa23.05■■□□□ 1.28
PTX3-201ENST00000295927 HLA-FP30511 346 aa23.05■■□□□ 1.28
PTX3-201ENST00000295927 ARCN1P48444 511 aaKnown RBP23.05■■□□□ 1.28
PTX3-201ENST00000295927 WDR4P57081 412 aaKnown RBP23.05■■□□□ 1.28
PTX3-201ENST00000295927 SLC12A1Q13621 1099 aa23.05■■□□□ 1.28
PTX3-201ENST00000295927 RARS2Q5T160 578 aaKnown RBP23.05■■□□□ 1.28
PTX3-201ENST00000295927 TSTD2Q5T7W7 516 aa23.05■■□□□ 1.28
PTX3-201ENST00000295927 STRA8Q7Z7C7 330 aa23.05■■□□□ 1.28
PTX3-201ENST00000295927 CELF5Q8N6W0 485 aaKnown RBP23.05■■□□□ 1.28
PTX3-201ENST00000295927 GDAP1Q8TB36 358 aa23.05■■□□□ 1.28
PTX3-201ENST00000295927 MRPL38Q96DV4 380 aaKnown RBP23.05■■□□□ 1.28
PTX3-201ENST00000295927 CCDC134Q9H6E4 229 aa23.05■■□□□ 1.28
PTX3-201ENST00000295927 GMNCA6NCL1 334 aa23.04■■□□□ 1.28
PTX3-201ENST00000295927 SMAD6O43541 496 aaKnown RBP23.04■■□□□ 1.28
PTX3-201ENST00000295927 PAMP19021 973 aa23.04■■□□□ 1.28
PTX3-201ENST00000295927 PITRM1Q5JRX3 1037 aa23.04■■□□□ 1.28
PTX3-201ENST00000295927 LY6G5CQ5SRR4 150 aa23.04■■□□□ 1.28
PTX3-201ENST00000295927 ASTLQ6HA08 431 aaPredicted RBP23.04■■□□□ 1.28
PTX3-201ENST00000295927 KIAA0930Q6ICG6 404 aaPredicted RBP23.04■■□□□ 1.28
PTX3-201ENST00000295927 NCEH1Q6PIU2 408 aa23.04■■□□□ 1.28
PTX3-201ENST00000295927 TIFABQ6ZNK6 161 aa23.04■■□□□ 1.28
PTX3-201ENST00000295927 TAX1BP1Q86VP1 789 aa23.04■■□□□ 1.28
PTX3-201ENST00000295927 ADGRG2Q8IZP9 1017 aa23.04■■□□□ 1.28
PTX3-201ENST00000295927 OTUB2Q96DC9 234 aa23.04■■□□□ 1.28
PTX3-201ENST00000295927 LRRC3BQ96PB8 259 aa23.04■■□□□ 1.28
PTX3-201ENST00000295927 TDRD1Q9BXT4 1180 aaKnown RBP23.04■■□□□ 1.28
PTX3-201ENST00000295927 DZANK1Q9NVP4 752 aa23.04■■□□□ 1.28
PTX3-201ENST00000295927 ARIH1Q9Y4X5 557 aaPredicted RBP23.04■■□□□ 1.28
PTX3-201ENST00000295927 PCDHGC4Q9Y5F7 938 aa23.04■■□□□ 1.28
PTX3-201ENST00000295927 RAI2Q9Y5P3 530 aa23.04■■□□□ 1.28
PTX3-201ENST00000295927 MYO9BQ13459 2157 aa23.04■■□□□ 1.28
PTX3-201ENST00000295927 ITGA2BP08514 1039 aa23.04■■□□□ 1.28
PTX3-201ENST00000295927 F7P08709 466 aaPredicted RBP23.04■■□□□ 1.28
PTX3-201ENST00000295927 BCAS4Q8TDM0 211 aa23.04■■□□□ 1.28
PTX3-201ENST00000295927 APOPT1Q96IL0 206 aa23.04■■□□□ 1.28
PTX3-201ENST00000295927 RBBP8Q99708 897 aa23.04■■□□□ 1.28
PTX3-201ENST00000295927 MROH6A6NGR9 719 aa23.03■■□□□ 1.28
PTX3-201ENST00000295927 ZWINTO95229 277 aa23.03■■□□□ 1.28
PTX3-201ENST00000295927 PAPSS2O95340 614 aaPredicted RBP23.03■■□□□ 1.28
PTX3-201ENST00000295927 ASMTLO95671 621 aa23.03■■□□□ 1.28
PTX3-201ENST00000295927 PRLP01236 227 aa23.03■■□□□ 1.28
PTX3-201ENST00000295927 PRKCGP05129 697 aa23.03■■□□□ 1.28
PTX3-201ENST00000295927 ALADP13716 330 aa23.03■■□□□ 1.28
PTX3-201ENST00000295927 TYRP14679 529 aa23.03■■□□□ 1.28
PTX3-201ENST00000295927 WEE1P30291 646 aa23.03■■□□□ 1.28
PTX3-201ENST00000295927 DNAJC3Q13217 504 aa23.03■■□□□ 1.28
PTX3-201ENST00000295927 ATXN7L2Q5T6C5 722 aaPredicted RBP23.03■■□□□ 1.28
PTX3-201ENST00000295927 ZNF771Q7L3S4 317 aaPredicted RBP23.03■■□□□ 1.28
PTX3-201ENST00000295927 BLOC1S5Q8TDH9 187 aa23.03■■□□□ 1.28
PTX3-201ENST00000295927 TCP10LQ8TDR4 215 aa23.03■■□□□ 1.28
PTX3-201ENST00000295927 APOL5Q9BWW9 433 aa23.03■■□□□ 1.28
PTX3-201ENST00000295927 SLC9A3R1O14745 358 aaPredicted RBP23.02■■□□□ 1.28
PTX3-201ENST00000295927 LDB2O43679 373 aa23.02■■□□□ 1.28
PTX3-201ENST00000295927 CCNFP41002 786 aa23.02■■□□□ 1.28
PTX3-201ENST00000295927 FUT11Q495W5 492 aa23.02■■□□□ 1.28
PTX3-201ENST00000295927 SRLQ86TD4 932 aa23.02■■□□□ 1.28
PTX3-201ENST00000295927 NPAS3Q8IXF0 933 aa23.02■■□□□ 1.28
PTX3-201ENST00000295927 CKAP2Q8WWK9 683 aa23.02■■□□□ 1.28
PTX3-201ENST00000295927 PPP2R3CQ969Q6 453 aa23.02■■□□□ 1.28
PTX3-201ENST00000295927 RSPRY1Q96DX4 576 aa23.02■■□□□ 1.28
PTX3-201ENST00000295927 PAIP2Q9BPZ3 127 aaKnown RBP23.02■■□□□ 1.28
PTX3-201ENST00000295927 GLP2RO95838 553 aa23.02■■□□□ 1.28
PTX3-201ENST00000295927 PDHA1P08559 390 aa23.02■■□□□ 1.28
PTX3-201ENST00000295927 PIRTP0C851 137 aa23.02■■□□□ 1.28
PTX3-201ENST00000295927 FSHRP23945 695 aa23.02■■□□□ 1.28
PTX3-201ENST00000295927 SPRP35270 261 aaPredicted RBP23.02■■□□□ 1.28
PTX3-201ENST00000295927 NEK3P51956 506 aa23.02■■□□□ 1.28
PTX3-201ENST00000295927 CSE1LP55060 971 aaKnown RBP23.02■■□□□ 1.28
PTX3-201ENST00000295927 SLC20A2Q08357 652 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms