RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 MRPL57Q9BQC6 102 aaKnown RBP15.45■□□□□ 0.06
SHROOM4-201ENST00000289292 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.45■□□□□ 0.06
SHROOM4-201ENST00000289292 TM7SF2O76062 418 aa15.45■□□□□ 0.06
SHROOM4-201ENST00000289292 RTP1P59025 263 aa15.45■□□□□ 0.06
SHROOM4-201ENST00000289292 SLC9A9Q8IVB4 645 aa15.45■□□□□ 0.06
SHROOM4-201ENST00000289292 MAGEC3Q8TD91 643 aa15.45■□□□□ 0.06
SHROOM4-201ENST00000289292 CIPCQ9C0C6 399 aa15.45■□□□□ 0.06
SHROOM4-201ENST00000289292 CD3EAPO15446 510 aaKnown RBP15.45■□□□□ 0.06
SHROOM4-201ENST00000289292 C4BPBP20851 252 aa15.45■□□□□ 0.06
SHROOM4-201ENST00000289292 NOS3P29474 1203 aa15.45■□□□□ 0.06
SHROOM4-201ENST00000289292 GSTM5P46439 218 aa15.45■□□□□ 0.06
SHROOM4-201ENST00000289292 CXCL9Q07325 125 aa15.45■□□□□ 0.06
SHROOM4-201ENST00000289292 DLG2Q15700 870 aa15.45■□□□□ 0.06
SHROOM4-201ENST00000289292 PYDC2Q56P42 97 aa15.45■□□□□ 0.06
SHROOM4-201ENST00000289292 SLC4A9Q96Q91 983 aa15.45■□□□□ 0.06
SHROOM4-201ENST00000289292 P2RX7Q99572 595 aaKnown RBP15.45■□□□□ 0.06
SHROOM4-201ENST00000289292 BTN3A3O00478 584 aa15.44■□□□□ 0.06
SHROOM4-201ENST00000289292 MGRN1O60291 552 aa15.44■□□□□ 0.06
SHROOM4-201ENST00000289292 GPR15P49685 360 aa15.44■□□□□ 0.06
SHROOM4-201ENST00000289292 USP46P62068 366 aa15.44■□□□□ 0.06
SHROOM4-201ENST00000289292 SERPINB11Q96P15 392 aa15.44■□□□□ 0.06
SHROOM4-201ENST00000289292 ASB2Q96Q27 587 aa15.44■□□□□ 0.06
SHROOM4-201ENST00000289292 HSD17B14Q9BPX1 270 aa15.44■□□□□ 0.06
SHROOM4-201ENST00000289292 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.44■□□□□ 0.06
SHROOM4-201ENST00000289292 LEF1Q9UJU2 399 aaPredicted RBP15.44■□□□□ 0.06
SHROOM4-201ENST00000289292 SH3GLB1Q9Y371 365 aa15.44■□□□□ 0.06
SHROOM4-201ENST00000289292 TSHRP16473 764 aa15.44■□□□□ 0.06
SHROOM4-201ENST00000289292 CRHR1P34998 444 aa15.44■□□□□ 0.06
SHROOM4-201ENST00000289292 ANXA11P50995 505 aaKnown RBP15.44■□□□□ 0.06
SHROOM4-201ENST00000289292 TOP3AQ13472 1001 aaPredicted RBP15.44■□□□□ 0.06
SHROOM4-201ENST00000289292 RIPK1Q13546 671 aa15.44■□□□□ 0.06
SHROOM4-201ENST00000289292 MFSD10Q14728 455 aa15.44■□□□□ 0.06
SHROOM4-201ENST00000289292 STXBP5Q5T5C0 1151 aa15.44■□□□□ 0.06
SHROOM4-201ENST00000289292 CCDC80Q76M96 950 aa15.44■□□□□ 0.06
SHROOM4-201ENST00000289292 PHACTR4Q8IZ21 702 aa15.44■□□□□ 0.06
SHROOM4-201ENST00000289292 SELENOMQ8WWX9 145 aa15.44■□□□□ 0.06
SHROOM4-201ENST00000289292 C19orf60Q96EN9 201 aa15.44■□□□□ 0.06
SHROOM4-201ENST00000289292 POLR3HQ9Y535 204 aaPredicted RBP15.44■□□□□ 0.06
SHROOM4-201ENST00000289292 ANXA6P08133 673 aa15.44■□□□□ 0.06
SHROOM4-201ENST00000289292 FAM171A1Q5VUB5 890 aa15.44■□□□□ 0.06
SHROOM4-201ENST00000289292 OFCC1Q8IZS5 231 aa15.44■□□□□ 0.06
SHROOM4-201ENST00000289292 FAM156AQ8NDB6 213 aa15.44■□□□□ 0.06
SHROOM4-201ENST00000289292 NKX2-3Q8TAU0 364 aa15.44■□□□□ 0.06
SHROOM4-201ENST00000289292 STAG3L4Q8TBR4 150 aa15.44■□□□□ 0.06
SHROOM4-201ENST00000289292 ZSCAN32Q9NX65 697 aa15.44■□□□□ 0.06
SHROOM4-201ENST00000289292 UBA2Q9UBT2 640 aaPredicted RBP15.44■□□□□ 0.06
SHROOM4-201ENST00000289292 AFDNP55196 1824 aaKnown RBP15.44■□□□□ 0.06
SHROOM4-201ENST00000289292 GRK4P32298 578 aa15.44■□□□□ 0.06
SHROOM4-201ENST00000289292 PHKG1Q16816 387 aa15.44■□□□□ 0.06
SHROOM4-201ENST00000289292 FBXO48Q5FWF7 155 aa15.44■□□□□ 0.06
SHROOM4-201ENST00000289292 EGFLAMQ63HQ2 1017 aa15.44■□□□□ 0.06
SHROOM4-201ENST00000289292 SENP8Q96LD8 212 aa15.44■□□□□ 0.06
SHROOM4-201ENST00000289292 MFSD14AQ96MC6 490 aa15.44■□□□□ 0.06
SHROOM4-201ENST00000289292 CDT1Q9H211 546 aa15.44■□□□□ 0.06
SHROOM4-201ENST00000289292 PCDH18Q9HCL0 1135 aa15.44■□□□□ 0.06
SHROOM4-201ENST00000289292 PRKAG3Q9UGI9 489 aa15.44■□□□□ 0.06
SHROOM4-201ENST00000289292 PCDHB5Q9Y5E4 795 aa15.44■□□□□ 0.06
SHROOM4-201ENST00000289292 G3V2T6 193 aa15.44■□□□□ 0.06
SHROOM4-201ENST00000289292 WNT10BO00744 389 aa15.44■□□□□ 0.06
SHROOM4-201ENST00000289292 CBFA2T3O75081 653 aa15.44■□□□□ 0.06
SHROOM4-201ENST00000289292 INO80DQ53TQ3 878 aaPredicted RBP15.44■□□□□ 0.06
SHROOM4-201ENST00000289292 DACT2Q5SW24 774 aa15.44■□□□□ 0.06
SHROOM4-201ENST00000289292 PPP1R15BQ5SWA1 713 aa15.44■□□□□ 0.06
SHROOM4-201ENST00000289292 SDHAF4Q5VUM1 108 aa15.44■□□□□ 0.06
SHROOM4-201ENST00000289292 ZNF549Q6P9A3 640 aa15.44■□□□□ 0.06
SHROOM4-201ENST00000289292 RALGPS2Q86X27 583 aaPredicted RBP15.44■□□□□ 0.06
SHROOM4-201ENST00000289292 CACUL1Q86Y37 369 aa15.44■□□□□ 0.06
SHROOM4-201ENST00000289292 CERS5Q8N5B7 392 aa15.44■□□□□ 0.06
SHROOM4-201ENST00000289292 GTF3C2Q8WUA4 911 aaPredicted RBP15.44■□□□□ 0.06
SHROOM4-201ENST00000289292 CENPIQ92674 756 aaPredicted RBP15.44■□□□□ 0.06
SHROOM4-201ENST00000289292 ZHX1-C8orf76Q96EF9 292 aa15.44■□□□□ 0.06
SHROOM4-201ENST00000289292 ZNF670Q9BS34 389 aa15.44■□□□□ 0.06
SHROOM4-201ENST00000289292 POLR1EQ9GZS1 481 aaKnown RBP15.44■□□□□ 0.06
SHROOM4-201ENST00000289292 SLC9A8Q9Y2E8 581 aa15.44■□□□□ 0.06
SHROOM4-201ENST00000289292 UBIAD1Q9Y5Z9 338 aa15.44■□□□□ 0.06
SHROOM4-201ENST00000289292 BCL9O00512 1426 aa15.43■□□□□ 0.06
SHROOM4-201ENST00000289292 NPR3P17342 541 aa15.43■□□□□ 0.06
SHROOM4-201ENST00000289292 ARMC6Q6NXE6 501 aa15.43■□□□□ 0.06
SHROOM4-201ENST00000289292 DOK6Q6PKX4 331 aa15.43■□□□□ 0.06
SHROOM4-201ENST00000289292 EXOC2Q96KP1 924 aa15.43■□□□□ 0.06
SHROOM4-201ENST00000289292 LYVE1Q9Y5Y7 322 aa15.43■□□□□ 0.06
SHROOM4-201ENST00000289292 ITGB5P18084 799 aa15.43■□□□□ 0.06
SHROOM4-201ENST00000289292 HPCAL1P37235 193 aa15.43■□□□□ 0.06
SHROOM4-201ENST00000289292 ZNF846Q147U1 533 aa15.43■□□□□ 0.06
SHROOM4-201ENST00000289292 ZNF280DQ6N043 979 aa15.43■□□□□ 0.06
SHROOM4-201ENST00000289292 SLCO6A1Q86UG4 719 aa15.43■□□□□ 0.06
SHROOM4-201ENST00000289292 ACMSDQ8TDX5 336 aa15.43■□□□□ 0.06
SHROOM4-201ENST00000289292 VAT1Q99536 393 aa15.43■□□□□ 0.06
SHROOM4-201ENST00000289292 EMILIN2Q9BXX0 1053 aa15.43■□□□□ 0.06
SHROOM4-201ENST00000289292 KLHL31Q9H511 634 aa15.43■□□□□ 0.06
SHROOM4-201ENST00000289292 PRPF19Q9UMS4 504 aaKnown RBP15.43■□□□□ 0.06
SHROOM4-201ENST00000289292 A0A0J9YYE9 177 aa15.43■□□□□ 0.06
SHROOM4-201ENST00000289292 SNAP91O60641 907 aa15.43■□□□□ 0.06
SHROOM4-201ENST00000289292 VCLP18206 1134 aa15.43■□□□□ 0.06
SHROOM4-201ENST00000289292 GTF2A2P52657 109 aa15.43■□□□□ 0.06
SHROOM4-201ENST00000289292 MON1BQ7L1V2 547 aa15.43■□□□□ 0.06
SHROOM4-201ENST00000289292 PIGZQ86VD9 579 aa15.43■□□□□ 0.06
SHROOM4-201ENST00000289292 LRTOMTQ8WZ04 291 aa15.43■□□□□ 0.06
SHROOM4-201ENST00000289292 FAM126AQ9BYI3 521 aaPredicted RBP15.43■□□□□ 0.06
SHROOM4-201ENST00000289292 GRHL1Q9NZI5 618 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms