RNA–Protein interactions for RNA: ENST00000287814.4

TIMP4-201, Transcript of TIMP metallopeptidase inhibitor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4-201ENST00000287814 TUBGCP5Q96RT8 1024 aa20.09■□□□□ 0.81
TIMP4-201ENST00000287814 IL12RB2Q99665 862 aa20.09■□□□□ 0.81
TIMP4-201ENST00000287814 CEP41Q9BYV8 373 aa20.09■□□□□ 0.81
TIMP4-201ENST00000287814 TRMT1Q9NXH9 659 aaKnown RBP20.09■□□□□ 0.81
TIMP4-201ENST00000287814 EIF2B4Q9UI10 523 aaKnown RBP20.09■□□□□ 0.81
TIMP4-201ENST00000287814 PYCARDQ9ULZ3 195 aa20.09■□□□□ 0.81
TIMP4-201ENST00000287814 FADS3Q9Y5Q0 445 aa20.09■□□□□ 0.81
TIMP4-201ENST00000287814 LAMA1P25391 3075 aa20.09■□□□□ 0.81
TIMP4-201ENST00000287814 TNRC6BQ9UPQ9 1833 aaKnown RBP20.09■□□□□ 0.81
TIMP4-201ENST00000287814 MEI4A8MW99 385 aa20.08■□□□□ 0.81
TIMP4-201ENST00000287814 APOC4-APOC2K7ER74 178 aa20.08■□□□□ 0.81
TIMP4-201ENST00000287814 TRAFD1O14545 582 aaPredicted RBP20.08■□□□□ 0.81
TIMP4-201ENST00000287814 PPP1R12AO14974 1030 aaPredicted RBP20.08■□□□□ 0.81
TIMP4-201ENST00000287814 APOC2P02655 101 aa20.08■□□□□ 0.81
TIMP4-201ENST00000287814 HLA-DQB2P05538 268 aa20.08■□□□□ 0.81
TIMP4-201ENST00000287814 AP1S1P61966 158 aa20.08■□□□□ 0.81
TIMP4-201ENST00000287814 IFI35P80217 286 aaPredicted RBP20.08■□□□□ 0.81
TIMP4-201ENST00000287814 SYT12Q8IV01 421 aa20.08■□□□□ 0.81
TIMP4-201ENST00000287814 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.08■□□□□ 0.81
TIMP4-201ENST00000287814 C1orf216Q8TAB5 229 aa20.08■□□□□ 0.81
TIMP4-201ENST00000287814 ZNF641Q96N77 438 aaPredicted RBP20.08■□□□□ 0.81
TIMP4-201ENST00000287814 ALS2CR12Q96Q35 445 aa20.08■□□□□ 0.81
TIMP4-201ENST00000287814 FAM118BQ9BPY3 351 aa20.08■□□□□ 0.81
TIMP4-201ENST00000287814 KDM4CQ9H3R0 1056 aa20.08■□□□□ 0.81
TIMP4-201ENST00000287814 ATP13A3Q9H7F0 1226 aa20.08■□□□□ 0.81
TIMP4-201ENST00000287814 C10orf88Q9H8K7 445 aa20.08■□□□□ 0.81
TIMP4-201ENST00000287814 SCUBE2Q9NQ36 999 aa20.08■□□□□ 0.81
TIMP4-201ENST00000287814 DKK3Q9UBP4 350 aa20.08■□□□□ 0.81
TIMP4-201ENST00000287814 GGT7Q9UJ14 662 aa20.08■□□□□ 0.81
TIMP4-201ENST00000287814 ITM2BQ9Y287 266 aa20.08■□□□□ 0.81
TIMP4-201ENST00000287814 ATP8A1Q9Y2Q0 1164 aa20.08■□□□□ 0.81
TIMP4-201ENST00000287814 PCDHGC4Q9Y5F7 938 aa20.08■□□□□ 0.81
TIMP4-201ENST00000287814 PIEZO1Q92508 2521 aa20.08■□□□□ 0.8
TIMP4-201ENST00000287814 FAM186AA6NE01 2351 aa20.08■□□□□ 0.8
TIMP4-201ENST00000287814 TCRBV7S2A1N4TA0A589 114 aa20.07■□□□□ 0.8
TIMP4-201ENST00000287814 USP27XA6NNY8 438 aa20.07■□□□□ 0.8
TIMP4-201ENST00000287814 DSC2Q02487 901 aa20.07■□□□□ 0.8
TIMP4-201ENST00000287814 BCL2L1Q07817 233 aa20.07■□□□□ 0.8
TIMP4-201ENST00000287814 ITKQ08881 620 aa20.07■□□□□ 0.8
TIMP4-201ENST00000287814 NIPAL4Q0D2K0 466 aa20.07■□□□□ 0.8
TIMP4-201ENST00000287814 GRM3Q14832 879 aa20.07■□□□□ 0.8
TIMP4-201ENST00000287814 NOMO1Q15155 1222 aa20.07■□□□□ 0.8
TIMP4-201ENST00000287814 RPS6KA1Q15418 735 aa20.07■□□□□ 0.8
TIMP4-201ENST00000287814 SYCP2LQ5T4T6 812 aa20.07■□□□□ 0.8
TIMP4-201ENST00000287814 PEAR1Q5VY43 1037 aaPredicted RBP20.07■□□□□ 0.8
TIMP4-201ENST00000287814 TCEAL6Q6IPX3 200 aa20.07■□□□□ 0.8
TIMP4-201ENST00000287814 BZW1Q7L1Q6 419 aaKnown RBP20.07■□□□□ 0.8
TIMP4-201ENST00000287814 TTC7BQ86TV6 843 aa20.07■□□□□ 0.8
TIMP4-201ENST00000287814 TRIM58Q8NG06 486 aa20.07■□□□□ 0.8
TIMP4-201ENST00000287814 ARRDC2Q8TBH0 407 aa20.07■□□□□ 0.8
TIMP4-201ENST00000287814 ACTL9Q8TC94 416 aa20.07■□□□□ 0.8
TIMP4-201ENST00000287814 SNX19Q92543 992 aa20.07■□□□□ 0.8
TIMP4-201ENST00000287814 TCEAL3Q969E4 200 aa20.07■□□□□ 0.8
TIMP4-201ENST00000287814 SEMA3CQ99985 751 aa20.07■□□□□ 0.8
TIMP4-201ENST00000287814 TLR10Q9BXR5 811 aa20.07■□□□□ 0.8
TIMP4-201ENST00000287814 BRD8Q9H0E9 1235 aa20.07■□□□□ 0.8
TIMP4-201ENST00000287814 SEMA4GQ9NTN9 838 aa20.07■□□□□ 0.8
TIMP4-201ENST00000287814 PTPRZ1P23471 2315 aaPredicted RBP20.07■□□□□ 0.8
TIMP4-201ENST00000287814 TSPAN11A1L157 253 aa20.07■□□□□ 0.8
TIMP4-201ENST00000287814 CETN2P41208 172 aa20.07■□□□□ 0.8
TIMP4-201ENST00000287814 OTUD4Q01804 1114 aaKnown RBP20.07■□□□□ 0.8
TIMP4-201ENST00000287814 CCDC15Q0P6D6 951 aa20.07■□□□□ 0.8
TIMP4-201ENST00000287814 WDR45BQ5MNZ6 344 aa20.07■□□□□ 0.8
TIMP4-201ENST00000287814 ALG1LQ6GMV1 187 aa20.07■□□□□ 0.8
TIMP4-201ENST00000287814 TFB1MQ8WVM0 346 aaKnown RBP20.07■□□□□ 0.8
TIMP4-201ENST00000287814 ECHDC3Q96DC8 303 aa20.07■□□□□ 0.8
TIMP4-201ENST00000287814 MIR1-1HGQ9H1L0 117 aa20.07■□□□□ 0.8
TIMP4-201ENST00000287814 PREBQ9HCU5 417 aa20.07■□□□□ 0.8
TIMP4-201ENST00000287814 SEPT10Q9P0V9 454 aa20.07■□□□□ 0.8
TIMP4-201ENST00000287814 ZFR2Q9UPR6 939 aaKnown RBP20.07■□□□□ 0.8
TIMP4-201ENST00000287814 TTLL3Q9Y4R7 772 aa20.07■□□□□ 0.8
TIMP4-201ENST00000287814 GVINP1Q7Z2Y8 2422 aa20.06■□□□□ 0.8
TIMP4-201ENST00000287814 ZNF292O60281 2723 aa20.06■□□□□ 0.8
TIMP4-201ENST00000287814 AREL1O15033 823 aa20.06■□□□□ 0.8
TIMP4-201ENST00000287814 ZSCAN12O43309 604 aa20.06■□□□□ 0.8
TIMP4-201ENST00000287814 LATO43561 262 aa20.06■□□□□ 0.8
TIMP4-201ENST00000287814 RNGTTO60942 597 aaKnown RBP20.06■□□□□ 0.8
TIMP4-201ENST00000287814 TJP3O95049 919 aa20.06■□□□□ 0.8
TIMP4-201ENST00000287814 ZNF806P0C7X5 589 aa20.06■□□□□ 0.8
TIMP4-201ENST00000287814 SERPINA4P29622 427 aa20.06■□□□□ 0.8
TIMP4-201ENST00000287814 MAT2AP31153 395 aaKnown RBP20.06■□□□□ 0.8
TIMP4-201ENST00000287814 MAPK8P45983 427 aa20.06■□□□□ 0.8
TIMP4-201ENST00000287814 CCR5P51681 352 aa20.06■□□□□ 0.8
TIMP4-201ENST00000287814 KLF1Q13351 362 aaPredicted RBP20.06■□□□□ 0.8
TIMP4-201ENST00000287814 SF3A2Q15428 464 aaKnown RBP20.06■□□□□ 0.8
TIMP4-201ENST00000287814 CCDC181Q5TID7 509 aa20.06■□□□□ 0.8
TIMP4-201ENST00000287814 HCAR2Q8TDS4 363 aa20.06■□□□□ 0.8
TIMP4-201ENST00000287814 POLR1EQ9GZS1 481 aaKnown RBP20.06■□□□□ 0.8
TIMP4-201ENST00000287814 AMACRQ9UHK6 382 aa20.06■□□□□ 0.8
TIMP4-201ENST00000287814 A0A1W2PQU0 124 aa20.05■□□□□ 0.8
TIMP4-201ENST00000287814 HTRA2O43464 458 aaPredicted RBP20.05■□□□□ 0.8
TIMP4-201ENST00000287814 AP1G1O43747 822 aa20.05■□□□□ 0.8
TIMP4-201ENST00000287814 LRP3O75074 770 aa20.05■□□□□ 0.8
TIMP4-201ENST00000287814 PCDH8O95206 1070 aa20.05■□□□□ 0.8
TIMP4-201ENST00000287814 PRKCGP05129 697 aa20.05■□□□□ 0.8
TIMP4-201ENST00000287814 CD27P26842 260 aa20.05■□□□□ 0.8
TIMP4-201ENST00000287814 WASHC5Q12768 1159 aa20.05■□□□□ 0.8
TIMP4-201ENST00000287814 TRAF2Q12933 501 aa20.05■□□□□ 0.8
TIMP4-201ENST00000287814 CSRP2Q16527 193 aa20.05■□□□□ 0.8
TIMP4-201ENST00000287814 UGP2Q16851 508 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms