RNA–Protein interactions for RNA: ENST00000285176.13

CCDC144B-201, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

BASIC

Gene CCDC144B, Length 4,310 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-201ENST00000285176 SLC30A1Q9Y6M5 507 aa9.13□□□□□ -0.95
CCDC144B-201ENST00000285176 LEFTY2O00292 366 aa9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 NDUFS3O75489 264 aa9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 GFAPP14136 432 aa9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 CD72P21854 359 aa9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 RPA3P35244 121 aaPredicted RBP9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 PEX19P40855 299 aa9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 MPP1Q00013 466 aa9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 WASHC5Q12768 1159 aa9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 PM20D1Q6GTS8 502 aa9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 Q6ZVU0 165 aa9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 CYP4V2Q6ZWL3 525 aaPredicted RBP9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 MARK2Q7KZI7 788 aaKnown RBP9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 OR13C4Q8NGS5 318 aa9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 TCP10LQ8TDR4 215 aa9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 SPDL1Q96EA4 605 aa9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 PHF21BQ96EK2 531 aa9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 TBATAQ96M53 351 aa9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 FAM129AQ9BZQ8 928 aa9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 CRISPLD2Q9H0B8 497 aa9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 CYLDQ9NQC7 956 aa9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 KLC4Q9NSK0 619 aa9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 ZNF358Q9NW07 568 aa9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 NVLO15381 856 aaKnown RBP9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 CCDC22O60826 627 aa9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 TRIOO75962 3097 aa9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 ANK1P16157 1881 aa9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 RHOQP17081 205 aa9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 APCDD1Q8J025 514 aa9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 RIBC1Q8N443 379 aaPredicted RBP9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 MRPL43Q8N983 215 aaKnown RBP9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 KLK6Q92876 244 aa9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 EGFL8Q99944 293 aa9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 C2orf49Q9BVC5 232 aaPredicted RBP9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 MANSC1Q9H8J5 431 aa9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 PPCSQ9HAB8 311 aa9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 SUN2Q9UH99 717 aa9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 C1orf232A0A0U1RR37 186 aa9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 LOC100653049A0A140TA62 436 aa9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 A0A1B0GVM2 712 aa9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 TCAF2A6NFQ2 919 aa9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 CCT8L1PA6NM43 557 aa9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 EIF4E1BA6NMX2 242 aaKnown RBP9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 KRT34O76011 436 aa9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 ZWINTO95229 277 aa9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 CXCL10P02778 98 aa9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 KCNA5P22460 613 aa9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 DNAJB1P25685 340 aa9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 RFC2P35250 354 aa9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 ARHGEF7Q14155 803 aa9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 UGP2Q16851 508 aa9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 TTC39BQ5VTQ0 682 aaPredicted RBP9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 FAM151BQ6UXP7 276 aa9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 EXOC3L1Q86VI1 746 aa9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 LZTR1Q8N653 840 aa9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 CNTD1Q8N815 330 aa9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 ANKLE1Q8NAG6 615 aa9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 Q9H521 79 aa9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 SLCO1B3Q9NPD5 702 aa9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 DYRK4Q9NR20 520 aa9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 DUS2Q9NX74 493 aaKnown RBP9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 LMCD1Q9NZU5 365 aa9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 SEPT3Q9UH03 358 aa9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 GRID1Q9ULK0 1009 aa9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 BCLAF3A2AJT9 711 aaKnown RBP9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 ERI2A8K979 691 aaKnown RBP9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 WASH3PC4AMC7 463 aa9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 H0YGN5 161 aa9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 MAP3K7O43318 606 aa9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 MTX2O75431 263 aa9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 POLR2EP19388 210 aaKnown RBP9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 FOXD4Q12950 439 aaPredicted RBP9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 RAB33AQ14088 237 aa9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 RAB41Q5JT25 222 aa9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 PARP9Q8IXQ6 854 aa9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 C12orf50Q8NA57 414 aaPredicted RBP9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 SPPL3Q8TCT6 385 aa9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 E2F7Q96AV8 911 aa9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 ULK4Q96C45 1275 aa9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 TEKT5Q96M29 485 aa9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 SLC9A7Q96T83 725 aa9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 EFHD1Q9BUP0 239 aa9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 FRMD8Q9BZ67 464 aaPredicted RBP9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 NOD2Q9HC29 1040 aa9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 CLIC5Q9NZA1 410 aa9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 ADA2Q9NZK5 511 aa9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 TRIM33Q9UPN9 1127 aa9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 FARP1Q9Y4F1 1045 aaPredicted RBP9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 PSAT1Q9Y617 370 aa9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 USP3Q9Y6I4 520 aa9.12□□□□□ -0.95
CCDC144B-201ENST00000285176 CNOT1A5YKK6 2376 aaKnown RBP9.11□□□□□ -0.95
CCDC144B-201ENST00000285176 KIAA0355O15063 1070 aa9.11□□□□□ -0.95
CCDC144B-201ENST00000285176 DCLK1O15075 740 aa9.11□□□□□ -0.95
CCDC144B-201ENST00000285176 PCDH8O95206 1070 aa9.11□□□□□ -0.95
CCDC144B-201ENST00000285176 PRAMEF12O95522 483 aa9.11□□□□□ -0.95
CCDC144B-201ENST00000285176 PRSS56P0CW18 603 aa9.11□□□□□ -0.95
CCDC144B-201ENST00000285176 IVDP26440 423 aa9.11□□□□□ -0.95
CCDC144B-201ENST00000285176 FMO4P31512 558 aa9.11□□□□□ -0.95
CCDC144B-201ENST00000285176 SOX11P35716 441 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms