RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 MTO1Q9Y2Z2 717 aaKnown RBP21.2■□□□□ 0.98
YBX3-202ENST00000279550 GREM1O60565 184 aa21.19■□□□□ 0.98
YBX3-202ENST00000279550 FSBPO95073 299 aa21.19■□□□□ 0.98
YBX3-202ENST00000279550 MAGEA12P43365 314 aa21.19■□□□□ 0.98
YBX3-202ENST00000279550 PDE1BQ01064 536 aa21.19■□□□□ 0.98
YBX3-202ENST00000279550 ESRP1Q6NXG1 681 aaKnown RBP21.19■□□□□ 0.98
YBX3-202ENST00000279550 TMEM184AQ6ZMB5 413 aa21.19■□□□□ 0.98
YBX3-202ENST00000279550 PPHLN1Q8NEY8 458 aaKnown RBP21.19■□□□□ 0.98
YBX3-202ENST00000279550 OR7D4Q8NG98 312 aa21.19■□□□□ 0.98
YBX3-202ENST00000279550 C10orf82Q8WW14 230 aa21.19■□□□□ 0.98
YBX3-202ENST00000279550 TADA1Q96BN2 335 aa21.19■□□□□ 0.98
YBX3-202ENST00000279550 PDFQ9HBH1 243 aa21.19■□□□□ 0.98
YBX3-202ENST00000279550 ACTL7AQ9Y615 435 aa21.19■□□□□ 0.98
YBX3-202ENST00000279550 NOTCH4Q99466 2003 aa21.19■□□□□ 0.98
YBX3-202ENST00000279550 A0A0D9SEW6 157 aa21.18■□□□□ 0.98
YBX3-202ENST00000279550 E2F8A0AVK6 867 aa21.18■□□□□ 0.98
YBX3-202ENST00000279550 SOBPA7XYQ1 873 aa21.18■□□□□ 0.98
YBX3-202ENST00000279550 MUSKO15146 869 aa21.18■□□□□ 0.98
YBX3-202ENST00000279550 UBOX5O94941 541 aa21.18■□□□□ 0.98
YBX3-202ENST00000279550 LATS1O95835 1130 aa21.18■□□□□ 0.98
YBX3-202ENST00000279550 PRKCGP05129 697 aa21.18■□□□□ 0.98
YBX3-202ENST00000279550 ARNTP27540 789 aa21.18■□□□□ 0.98
YBX3-202ENST00000279550 HOXD9P28356 352 aaPredicted RBP21.18■□□□□ 0.98
YBX3-202ENST00000279550 AVPR1AP37288 418 aa21.18■□□□□ 0.98
YBX3-202ENST00000279550 MAGEA9P43362 315 aa21.18■□□□□ 0.98
YBX3-202ENST00000279550 SCTRP47872 440 aa21.18■□□□□ 0.98
YBX3-202ENST00000279550 LBRQ14739 615 aaKnown RBP21.18■□□□□ 0.98
YBX3-202ENST00000279550 ADGRF1Q5T601 910 aa21.18■□□□□ 0.98
YBX3-202ENST00000279550 CCDC117Q8IWD4 279 aaPredicted RBP21.18■□□□□ 0.98
YBX3-202ENST00000279550 EFHBQ8N7U6 833 aa21.18■□□□□ 0.98
YBX3-202ENST00000279550 ISL2Q96A47 359 aa21.18■□□□□ 0.98
YBX3-202ENST00000279550 SNX15Q9NRS6 342 aa21.18■□□□□ 0.98
YBX3-202ENST00000279550 STOML2Q9UJZ1 356 aa21.18■□□□□ 0.98
YBX3-202ENST00000279550 ARHGAP26Q9UNA1 814 aa21.18■□□□□ 0.98
YBX3-202ENST00000279550 LINC01565O15544 149 aa21.18■□□□□ 0.98
YBX3-202ENST00000279550 GSRP00390 522 aa21.18■□□□□ 0.98
YBX3-202ENST00000279550 SPRP35270 261 aaPredicted RBP21.18■□□□□ 0.98
YBX3-202ENST00000279550 CSE1LP55060 971 aaKnown RBP21.18■□□□□ 0.98
YBX3-202ENST00000279550 IRX4P78413 519 aa21.18■□□□□ 0.98
YBX3-202ENST00000279550 MLLT1Q03111 559 aaPredicted RBP21.18■□□□□ 0.98
YBX3-202ENST00000279550 SEPT6Q14141 434 aa21.18■□□□□ 0.98
YBX3-202ENST00000279550 N4BP2L1Q5TBK1 243 aaPredicted RBP21.18■□□□□ 0.98
YBX3-202ENST00000279550 PDPK2PQ6A1A2 396 aa21.18■□□□□ 0.98
YBX3-202ENST00000279550 FSTL4Q6MZW2 842 aa21.18■□□□□ 0.98
YBX3-202ENST00000279550 POTEHQ6S545 545 aa21.18■□□□□ 0.98
YBX3-202ENST00000279550 Q6ZNB5 142 aa21.18■□□□□ 0.98
YBX3-202ENST00000279550 RFWD2Q8NHY2 731 aa21.18■□□□□ 0.98
YBX3-202ENST00000279550 TSSK1BQ9BXA7 367 aa21.18■□□□□ 0.98
YBX3-202ENST00000279550 ACTR5Q9H9F9 607 aaPredicted RBP21.18■□□□□ 0.98
YBX3-202ENST00000279550 NPHS2Q9NP85 383 aa21.18■□□□□ 0.98
YBX3-202ENST00000279550 LMCD1Q9NZU5 365 aa21.18■□□□□ 0.98
YBX3-202ENST00000279550 SIRPGQ9P1W8 387 aa21.18■□□□□ 0.98
YBX3-202ENST00000279550 KLHL14Q9P2G3 628 aa21.18■□□□□ 0.98
YBX3-202ENST00000279550 ZMYM5Q9UJ78 669 aa21.18■□□□□ 0.98
YBX3-202ENST00000279550 MRPS23Q9Y3D9 190 aaKnown RBP21.18■□□□□ 0.98
YBX3-202ENST00000279550 HGSO14964 777 aaPredicted RBP21.17■□□□□ 0.98
YBX3-202ENST00000279550 TSPAN3O60637 253 aa21.17■□□□□ 0.98
YBX3-202ENST00000279550 BPGMP07738 259 aa21.17■□□□□ 0.98
YBX3-202ENST00000279550 NEFHP12036 1026 aa21.17■□□□□ 0.98
YBX3-202ENST00000279550 ARCN1P48444 511 aaKnown RBP21.17■□□□□ 0.98
YBX3-202ENST00000279550 GNA12Q03113 381 aa21.17■□□□□ 0.98
YBX3-202ENST00000279550 GALNTL6Q49A17 601 aa21.17■□□□□ 0.98
YBX3-202ENST00000279550 RARS2Q5T160 578 aaKnown RBP21.17■□□□□ 0.98
YBX3-202ENST00000279550 TMCO4Q5TGY1 634 aa21.17■□□□□ 0.98
YBX3-202ENST00000279550 FITM2Q8N6M3 262 aa21.17■□□□□ 0.98
YBX3-202ENST00000279550 TTC16Q8NEE8 873 aa21.17■□□□□ 0.98
YBX3-202ENST00000279550 NSMCE1Q8WV22 266 aa21.17■□□□□ 0.98
YBX3-202ENST00000279550 PLCD4Q9BRC7 762 aa21.17■□□□□ 0.98
YBX3-202ENST00000279550 SMG9Q9H0W8 520 aaKnown RBP21.17■□□□□ 0.98
YBX3-202ENST00000279550 CAB39LQ9H9S4 337 aa21.17■□□□□ 0.98
YBX3-202ENST00000279550 ARNT2Q9HBZ2 717 aa21.17■□□□□ 0.98
YBX3-202ENST00000279550 MRM3Q9HC36 420 aaKnown RBP21.17■□□□□ 0.98
YBX3-202ENST00000279550 TREX1Q9NSU2 369 aa21.17■□□□□ 0.98
YBX3-202ENST00000279550 CFAP97Q9P2B7 532 aa21.17■□□□□ 0.98
YBX3-202ENST00000279550 LSM7Q9UK45 103 aaKnown RBP21.17■□□□□ 0.98
YBX3-202ENST00000279550 CHD5Q8TDI0 1954 aa21.17■□□□□ 0.98
YBX3-202ENST00000279550 MYO9BQ13459 2157 aa21.17■□□□□ 0.98
YBX3-202ENST00000279550 GLRA3O75311 464 aa21.16■□□□□ 0.98
YBX3-202ENST00000279550 CEBPBP17676 345 aa21.16■□□□□ 0.98
YBX3-202ENST00000279550 TYK2P29597 1187 aa21.16■□□□□ 0.98
YBX3-202ENST00000279550 CDH4P55283 916 aa21.16■□□□□ 0.98
YBX3-202ENST00000279550 MSLNQ13421 630 aaPredicted RBP21.16■□□□□ 0.98
YBX3-202ENST00000279550 DLG2Q15700 870 aa21.16■□□□□ 0.98
YBX3-202ENST00000279550 ING5Q8WYH8 240 aa21.16■□□□□ 0.98
YBX3-202ENST00000279550 DDX50Q9BQ39 737 aaKnown RBP21.16■□□□□ 0.98
YBX3-202ENST00000279550 TTYH1Q9H313 450 aaPredicted RBP21.16■□□□□ 0.98
YBX3-202ENST00000279550 HAUS2Q9NVX0 235 aa21.16■□□□□ 0.98
YBX3-202ENST00000279550 ZNF358Q9NW07 568 aa21.16■□□□□ 0.98
YBX3-202ENST00000279550 SLC12A4Q9UP95 1085 aa21.16■□□□□ 0.98
YBX3-202ENST00000279550 COLQQ9Y215 455 aaPredicted RBP21.16■□□□□ 0.98
YBX3-202ENST00000279550 CCL26Q9Y258 94 aa21.16■□□□□ 0.98
YBX3-202ENST00000279550 CAPN7Q9Y6W3 813 aa21.16■□□□□ 0.98
YBX3-202ENST00000279550 MIA3Q5JRA6 1907 aa21.16■□□□□ 0.98
YBX3-202ENST00000279550 TMEM265A0A087WTH1 108 aa21.15■□□□□ 0.98
YBX3-202ENST00000279550 LEFTY2O00292 366 aa21.15■□□□□ 0.98
YBX3-202ENST00000279550 SCAMP3O14828 347 aaKnown RBP21.15■□□□□ 0.98
YBX3-202ENST00000279550 KLF11O14901 512 aa21.15■□□□□ 0.98
YBX3-202ENST00000279550 PLIN3O60664 434 aa21.15■□□□□ 0.98
YBX3-202ENST00000279550 VAPBO95292 243 aa21.15■□□□□ 0.98
YBX3-202ENST00000279550 GLDCP23378 1020 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms