RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 ZNF26P17031 533 aaPredicted RBP16.13■□□□□ 0.17
MAP1LC3B-201ENST00000268607 GOT1P17174 413 aa16.13■□□□□ 0.17
MAP1LC3B-201ENST00000268607 CDH15P55291 814 aa16.13■□□□□ 0.17
MAP1LC3B-201ENST00000268607 B3GALNT2Q8NCR0 500 aa16.13■□□□□ 0.17
MAP1LC3B-201ENST00000268607 DDHD1Q8NEL9 900 aa16.13■□□□□ 0.17
MAP1LC3B-201ENST00000268607 PLEKHA8Q96JA3 519 aa16.13■□□□□ 0.17
MAP1LC3B-201ENST00000268607 KCTD15Q96SI1 283 aaPredicted RBP16.13■□□□□ 0.17
MAP1LC3B-201ENST00000268607 CEP41Q9BYV8 373 aa16.13■□□□□ 0.17
MAP1LC3B-201ENST00000268607 WDR55Q9H6Y2 383 aaPredicted RBP16.13■□□□□ 0.17
MAP1LC3B-201ENST00000268607 MTMR10Q9NXD2 777 aa16.13■□□□□ 0.17
MAP1LC3B-201ENST00000268607 TUBA8Q9NY65 449 aaPredicted RBP16.13■□□□□ 0.17
MAP1LC3B-201ENST00000268607 IGSF9Q9P2J2 1179 aa16.13■□□□□ 0.17
MAP1LC3B-201ENST00000268607 RBMX2Q9Y388 322 aaKnown RBP16.13■□□□□ 0.17
MAP1LC3B-201ENST00000268607 H6PDO95479 791 aa16.12■□□□□ 0.17
MAP1LC3B-201ENST00000268607 HSPA4LO95757 839 aa16.12■□□□□ 0.17
MAP1LC3B-201ENST00000268607 CDH3P22223 829 aa16.12■□□□□ 0.17
MAP1LC3B-201ENST00000268607 DPP6P42658 865 aa16.12■□□□□ 0.17
MAP1LC3B-201ENST00000268607 KIAA0319Q5VV43 1072 aa16.12■□□□□ 0.17
MAP1LC3B-201ENST00000268607 XKR5Q6UX68 686 aa16.12■□□□□ 0.17
MAP1LC3B-201ENST00000268607 SLC26A9Q7LBE3 791 aa16.12■□□□□ 0.17
MAP1LC3B-201ENST00000268607 PTAR1Q7Z6K3 402 aaPredicted RBP16.12■□□□□ 0.17
MAP1LC3B-201ENST00000268607 CLVS1Q8IUQ0 354 aaPredicted RBP16.12■□□□□ 0.17
MAP1LC3B-201ENST00000268607 ZSCAN18Q8TBC5 510 aaPredicted RBP16.12■□□□□ 0.17
MAP1LC3B-201ENST00000268607 PDCD6IPQ8WUM4 868 aaKnown RBP16.12■□□□□ 0.17
MAP1LC3B-201ENST00000268607 RCN3Q96D15 328 aa16.12■□□□□ 0.17
MAP1LC3B-201ENST00000268607 LRRC39Q96DD0 335 aa16.12■□□□□ 0.17
MAP1LC3B-201ENST00000268607 MOCOSQ96EN8 888 aa16.12■□□□□ 0.17
MAP1LC3B-201ENST00000268607 ZNF560Q96MR9 790 aa16.12■□□□□ 0.17
MAP1LC3B-201ENST00000268607 CDH19Q9H159 772 aa16.12■□□□□ 0.17
MAP1LC3B-201ENST00000268607 ACSS2Q9NR19 701 aa16.12■□□□□ 0.17
MAP1LC3B-201ENST00000268607 PIH1D1Q9NWS0 290 aaKnown RBP16.12■□□□□ 0.17
MAP1LC3B-201ENST00000268607 DCDC2Q9UHG0 476 aa16.12■□□□□ 0.17
MAP1LC3B-201ENST00000268607 PSAT1Q9Y617 370 aa16.12■□□□□ 0.17
MAP1LC3B-201ENST00000268607 ARHGEF37A1IGU5 675 aa16.12■□□□□ 0.17
MAP1LC3B-201ENST00000268607 CSPG5O95196 566 aa16.12■□□□□ 0.17
MAP1LC3B-201ENST00000268607 FGFR3P22607 806 aa16.12■□□□□ 0.17
MAP1LC3B-201ENST00000268607 RPL10P27635 214 aaKnown RBP16.12■□□□□ 0.17
MAP1LC3B-201ENST00000268607 GATMP50440 423 aa16.12■□□□□ 0.17
MAP1LC3B-201ENST00000268607 C21orf59P57076 290 aa16.12■□□□□ 0.17
MAP1LC3B-201ENST00000268607 CTBSQ01459 385 aa16.12■□□□□ 0.17
MAP1LC3B-201ENST00000268607 TCTN1Q2MV58 587 aa16.12■□□□□ 0.17
MAP1LC3B-201ENST00000268607 MGAT5BQ3V5L5 792 aa16.12■□□□□ 0.17
MAP1LC3B-201ENST00000268607 SLC9A4Q6AI14 798 aa16.12■□□□□ 0.17
MAP1LC3B-201ENST00000268607 CASC4Q6P4E1 433 aa16.12■□□□□ 0.17
MAP1LC3B-201ENST00000268607 TMCO2Q7Z6W1 182 aaPredicted RBP16.12■□□□□ 0.17
MAP1LC3B-201ENST00000268607 DEFB128Q7Z7B8 93 aa16.12■□□□□ 0.17
MAP1LC3B-201ENST00000268607 MOCS1Q9NZB8 636 aa16.12■□□□□ 0.17
MAP1LC3B-201ENST00000268607 PDE4DIPQ5VU43 2346 aa16.12■□□□□ 0.17
MAP1LC3B-201ENST00000268607 WDR27A2RRH5 827 aa16.12■□□□□ 0.17
MAP1LC3B-201ENST00000268607 MOXD2PA6NHM9 499 aa16.12■□□□□ 0.17
MAP1LC3B-201ENST00000268607 ARVCFO00192 962 aa16.12■□□□□ 0.17
MAP1LC3B-201ENST00000268607 GPR182O15218 404 aa16.12■□□□□ 0.17
MAP1LC3B-201ENST00000268607 B4GALT3O60512 393 aa16.12■□□□□ 0.17
MAP1LC3B-201ENST00000268607 ITGB1P05556 798 aa16.12■□□□□ 0.17
MAP1LC3B-201ENST00000268607 ZNF12P17014 697 aa16.12■□□□□ 0.17
MAP1LC3B-201ENST00000268607 CNTFP26441 200 aa16.12■□□□□ 0.17
MAP1LC3B-201ENST00000268607 AXLP30530 894 aa16.12■□□□□ 0.17
MAP1LC3B-201ENST00000268607 MAGEA3P43357 314 aa16.12■□□□□ 0.17
MAP1LC3B-201ENST00000268607 MAP3K7CLP57077 242 aa16.12■□□□□ 0.17
MAP1LC3B-201ENST00000268607 NKX3-2P78367 333 aa16.12■□□□□ 0.17
MAP1LC3B-201ENST00000268607 CBLBQ13191 982 aa16.12■□□□□ 0.17
MAP1LC3B-201ENST00000268607 NME3Q13232 169 aa16.12■□□□□ 0.17
MAP1LC3B-201ENST00000268607 SYPL2Q5VXT5 272 aa16.12■□□□□ 0.17
MAP1LC3B-201ENST00000268607 KCNT2Q6UVM3 1135 aa16.12■□□□□ 0.17
MAP1LC3B-201ENST00000268607 NAPRTQ6XQN6 538 aa16.12■□□□□ 0.17
MAP1LC3B-201ENST00000268607 HFE2Q6ZVN8 426 aa16.12■□□□□ 0.17
MAP1LC3B-201ENST00000268607 BORCS5Q969J3 196 aa16.12■□□□□ 0.17
MAP1LC3B-201ENST00000268607 FERMT1Q9BQL6 677 aa16.12■□□□□ 0.17
MAP1LC3B-201ENST00000268607 MED10Q9BTT4 135 aa16.12■□□□□ 0.17
MAP1LC3B-201ENST00000268607 COQ10BQ9H8M1 238 aa16.12■□□□□ 0.17
MAP1LC3B-201ENST00000268607 TCF7L2Q9NQB0 619 aa16.12■□□□□ 0.17
MAP1LC3B-201ENST00000268607 GDAP2Q9NXN4 497 aa16.12■□□□□ 0.17
MAP1LC3B-201ENST00000268607 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.12■□□□□ 0.17
MAP1LC3B-201ENST00000268607 RGSL1A5PLK6 1076 aa16.11■□□□□ 0.17
MAP1LC3B-201ENST00000268607 MDM4O15151 490 aa16.11■□□□□ 0.17
MAP1LC3B-201ENST00000268607 GNRH1P01148 92 aa16.11■□□□□ 0.17
MAP1LC3B-201ENST00000268607 KCNE1P15382 129 aa16.11■□□□□ 0.17
MAP1LC3B-201ENST00000268607 GLDCP23378 1020 aa16.11■□□□□ 0.17
MAP1LC3B-201ENST00000268607 CA8P35219 290 aa16.11■□□□□ 0.17
MAP1LC3B-201ENST00000268607 SULT1E1P49888 294 aa16.11■□□□□ 0.17
MAP1LC3B-201ENST00000268607 ZNF829Q3KNS6 432 aaPredicted RBP16.11■□□□□ 0.17
MAP1LC3B-201ENST00000268607 SV2CQ496J9 727 aa16.11■□□□□ 0.17
MAP1LC3B-201ENST00000268607 IL23RQ5VWK5 629 aa16.11■□□□□ 0.17
MAP1LC3B-201ENST00000268607 C16orf87Q6PH81 154 aa16.11■□□□□ 0.17
MAP1LC3B-201ENST00000268607 TRAF7Q6Q0C0 670 aa16.11■□□□□ 0.17
MAP1LC3B-201ENST00000268607 PAQR9Q6ZVX9 377 aa16.11■□□□□ 0.17
MAP1LC3B-201ENST00000268607 ZBTB46Q86UZ6 589 aa16.11■□□□□ 0.17
MAP1LC3B-201ENST00000268607 MYO1HQ8N1T3 1032 aa16.11■□□□□ 0.17
MAP1LC3B-201ENST00000268607 ACMSDQ8TDX5 336 aa16.11■□□□□ 0.17
MAP1LC3B-201ENST00000268607 ATP6V1E2Q96A05 226 aa16.11■□□□□ 0.17
MAP1LC3B-201ENST00000268607 C12orf43Q96C57 262 aaKnown RBP16.11■□□□□ 0.17
MAP1LC3B-201ENST00000268607 ISOC1Q96CN7 298 aa16.11■□□□□ 0.17
MAP1LC3B-201ENST00000268607 THAP11Q96EK4 314 aa16.11■□□□□ 0.17
MAP1LC3B-201ENST00000268607 CSPG4P5Q96PW8 444 aa16.11■□□□□ 0.17
MAP1LC3B-201ENST00000268607 LGMNQ99538 433 aa16.11■□□□□ 0.17
MAP1LC3B-201ENST00000268607 TMEM79Q9BSE2 394 aa16.11■□□□□ 0.17
MAP1LC3B-201ENST00000268607 CDY1Q9Y6F8 540 aa16.11■□□□□ 0.17
MAP1LC3B-201ENST00000268607 PSMD12O00232 456 aaPredicted RBP16.11■□□□□ 0.17
MAP1LC3B-201ENST00000268607 TGM2P21980 687 aa16.11■□□□□ 0.17
MAP1LC3B-201ENST00000268607 HMOX2P30519 316 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms